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The map label for this gene is 189025494

Identifier: 189025494

GI number: 189025494

Start: 272040

End: 273386

Strand: Reverse

Name: 189025494

Synonym: TPASS_0260

Alternate gene names: NA

Gene position: 273386-272040 (Counterclockwise)

Preceding gene: 189025499

Following gene: 189025492

Centisome position: 23.99

GC content: 56.94

Gene sequence:

>1347_bases
GTGTGCTACTATCGGTATGTGCAAGTTCACTCTATCTGGAGGCGCTTCTGTGCGCTCGGCCTGCTGGTGCCCTTTCTGCT
TCTGCTGTTTTCTTGCACCAACACGGTTGGCTACGGCGTCCTCCAGTGGTCCCTCCCAGATCTGGGACTGAGTACAGGAG
ACATCCTGCCGGTGTACGTGCGCTCAAACGTCTCCCAAGTGTACATTGTGGAAATCCAGAAGAAAAAGGTAGAGCTGCCT
TTCTGGCAGCTAAAATTATGCAGGACAAAGAAAGAGGCGCTTCAGTACGCTGAGCGCCTCCGCGAGTACCGTTACAGCTA
CGCCACCTCTGTGCTCGACGGTCTGCCCCTGCGAGAAGGGCCTGAGAACACTGCCCCCCAAGTTTATCGCCTCCGCGAGG
GACAGGCGGTCAAGCTATTGTGGAAGGGTACAGGGAAGGCCGTCTACCGCGGTGAAAATCGCCTCGAAGGGGATTGGTTC
AAGGTCATGACCGAAGACGGTACCACCGGATGGTGTTTTTCTCACGGTCTATCCCTCTTTGATGAGCGCGAGTCGCGTCC
TACAGTACGAGAAACGGACGATCTCGCACGTGATCGCGACCTTCAGCACGTACTCAACTCTGCGTGGTATCCTGAATACT
ACCGCACCATGGTTGAACAGCGCCGCATCGACTTAGAAAAAATGGCAAGCGGCTGGGGTTTATTTGTCGGTGAGAAAAAA
GGCCTCGCACGCATTGAATTGCCCGATGCGCACTACGCCTTTCCCTACTCCCGTCTGGTAAAAACCGGATCCAACGGGTA
CCTCTTTGACGGATCCTCTCTGAGCATCTATGTTCGGGACGCGCACACCCTTGCCGCGCAGTTCACTGACGAAGCTGGGC
GCCTGCGCATAGAACGCTTCGTCACCCTGGAGAAAACGCCTGAAGAGATTATCGCAGAAGAGCAGCTGCGGCGCAGTGCG
CTTTTGGAACACGTCTGCACACCAGGGCTGCGCCTTCACTCTGAGATATATGGGACGCTGTCTTTTACAGAACGCAACGT
CTTCACCTGGACAGGGGCGCGCGCGCTGTCCCCGGCGCTTATCCCCGCAGGGGCAGGGAGCACGGGGCGTGTAGCACTGC
GGTGCTTCATAGATCAATCGCTGAAAAGCGAGTATGAAGGGGTGCTGTCCTTCGACTTTGACAGCGCGCAGGAATGGGTG
CACTTCCTGTACTTACGCACCCCCGGGGGGCTAAAGCTCGAACACATAGACTCCACCCACCTGAAGGATGCGACAGTGCT
CCGCAGGAGCGTAAGCCCAGTGGTACTCTACTTCGCGCCGGAAGGACACGCCGAGCCCCAACCCTAA

Upstream 100 bases:

>100_bases
AGAACGGTCATGCACTTAAGTCTTTTTCCAGAATTCACGTCACGCGCTCCTGCGCGCACACCTGCAGAGATCGTTCGCAC
GCCTTTTCCAGGAAAGGTGG

Downstream 100 bases:

>100_bases
GAAGCAGTCAGCCGTCGGGAAGGGAGACGGCCGCAGGCCCCTTTTGGGAGGACGAGCGAGCCCTGTGTGCCCGGCTGCCC
GCCAGCTGCCACCCCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MCYYRYVQVHSIWRRFCALGLLVPFLLLLFSCTNTVGYGVLQWSLPDLGLSTGDILPVYVRSNVSQVYIVEIQKKKVELP
FWQLKLCRTKKEALQYAERLREYRYSYATSVLDGLPLREGPENTAPQVYRLREGQAVKLLWKGTGKAVYRGENRLEGDWF
KVMTEDGTTGWCFSHGLSLFDERESRPTVRETDDLARDRDLQHVLNSAWYPEYYRTMVEQRRIDLEKMASGWGLFVGEKK
GLARIELPDAHYAFPYSRLVKTGSNGYLFDGSSLSIYVRDAHTLAAQFTDEAGRLRIERFVTLEKTPEEIIAEEQLRRSA
LLEHVCTPGLRLHSEIYGTLSFTERNVFTWTGARALSPALIPAGAGSTGRVALRCFIDQSLKSEYEGVLSFDFDSAQEWV
HFLYLRTPGGLKLEHIDSTHLKDATVLRRSVSPVVLYFAPEGHAEPQP

Sequences:

>Translated_448_residues
MCYYRYVQVHSIWRRFCALGLLVPFLLLLFSCTNTVGYGVLQWSLPDLGLSTGDILPVYVRSNVSQVYIVEIQKKKVELP
FWQLKLCRTKKEALQYAERLREYRYSYATSVLDGLPLREGPENTAPQVYRLREGQAVKLLWKGTGKAVYRGENRLEGDWF
KVMTEDGTTGWCFSHGLSLFDERESRPTVRETDDLARDRDLQHVLNSAWYPEYYRTMVEQRRIDLEKMASGWGLFVGEKK
GLARIELPDAHYAFPYSRLVKTGSNGYLFDGSSLSIYVRDAHTLAAQFTDEAGRLRIERFVTLEKTPEEIIAEEQLRRSA
LLEHVCTPGLRLHSEIYGTLSFTERNVFTWTGARALSPALIPAGAGSTGRVALRCFIDQSLKSEYEGVLSFDFDSAQEWV
HFLYLRTPGGLKLEHIDSTHLKDATVLRRSVSPVVLYFAPEGHAEPQP
>Mature_448_residues
MCYYRYVQVHSIWRRFCALGLLVPFLLLLFSCTNTVGYGVLQWSLPDLGLSTGDILPVYVRSNVSQVYIVEIQKKKVELP
FWQLKLCRTKKEALQYAERLREYRYSYATSVLDGLPLREGPENTAPQVYRLREGQAVKLLWKGTGKAVYRGENRLEGDWF
KVMTEDGTTGWCFSHGLSLFDERESRPTVRETDDLARDRDLQHVLNSAWYPEYYRTMVEQRRIDLEKMASGWGLFVGEKK
GLARIELPDAHYAFPYSRLVKTGSNGYLFDGSSLSIYVRDAHTLAAQFTDEAGRLRIERFVTLEKTPEEIIAEEQLRRSA
LLEHVCTPGLRLHSEIYGTLSFTERNVFTWTGARALSPALIPAGAGSTGRVALRCFIDQSLKSEYEGVLSFDFDSAQEWV
HFLYLRTPGGLKLEHIDSTHLKDATVLRRSVSPVVLYFAPEGHAEPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y260_TREPA (O83284)

Other databases:

- EMBL:   AE000520
- PIR:   A71347
- RefSeq:   NP_218701.1
- ProteinModelPortal:   O83284
- IntAct:   O83284
- MINT:   MINT-6480520
- GeneID:   2611326
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0260
- NMPDR:   fig|243276.1.peg.260
- TIGR:   TP_0260
- HOGENOM:   HBG731944
- OMA:   NKYAISK
- ProtClustDB:   CLSK218614
- BioCyc:   TPAL243276:TP_0260-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51248; Mature: 51248

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x206ac6ec)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYYRYVQVHSIWRRFCALGLLVPFLLLLFSCTNTVGYGVLQWSLPDLGLSTGDILPVYV
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEE
RSNVSQVYIVEIQKKKVELPFWQLKLCRTKKEALQYAERLREYRYSYATSVLDGLPLREG
ECCCCEEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PENTAPQVYRLREGQAVKLLWKGTGKAVYRGENRLEGDWFKVMTEDGTTGWCFSHGLSLF
CCCCCCCEEEECCCCEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHCCHHH
DERESRPTVRETDDLARDRDLQHVLNSAWYPEYYRTMVEQRRIDLEKMASGWGLFVGEKK
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCC
GLARIELPDAHYAFPYSRLVKTGSNGYLFDGSSLSIYVRDAHTLAAQFTDEAGRLRIERF
CCEEEECCCCCCCCCHHHHHHCCCCCEEEECCEEEEEEECCHHHHHHHCCCCCCEEEEEE
VTLEKTPEEIIAEEQLRRSALLEHVCTPGLRLHSEIYGTLSFTERNVFTWTGARALSPAL
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHEEEEEECCCEEEEECCHHCCCCE
IPAGAGSTGRVALRCFIDQSLKSEYEGVLSFDFDSAQEWVHFLYLRTPGGLKLEHIDSTH
EECCCCCCCCEEEEEEHHHHHHHHCCCEEEECCCCHHHHEEEEEEECCCCCEEEECCCCC
LKDATVLRRSVSPVVLYFAPEGHAEPQP
CHHHHHHHHCCCCEEEEECCCCCCCCCH
>Mature Secondary Structure
MCYYRYVQVHSIWRRFCALGLLVPFLLLLFSCTNTVGYGVLQWSLPDLGLSTGDILPVYV
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEE
RSNVSQVYIVEIQKKKVELPFWQLKLCRTKKEALQYAERLREYRYSYATSVLDGLPLREG
ECCCCEEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PENTAPQVYRLREGQAVKLLWKGTGKAVYRGENRLEGDWFKVMTEDGTTGWCFSHGLSLF
CCCCCCCEEEECCCCEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCCCHHHHHCCHHH
DERESRPTVRETDDLARDRDLQHVLNSAWYPEYYRTMVEQRRIDLEKMASGWGLFVGEKK
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCC
GLARIELPDAHYAFPYSRLVKTGSNGYLFDGSSLSIYVRDAHTLAAQFTDEAGRLRIERF
CCEEEECCCCCCCCCHHHHHHCCCCCEEEECCEEEEEEECCHHHHHHHCCCCCCEEEEEE
VTLEKTPEEIIAEEQLRRSALLEHVCTPGLRLHSEIYGTLSFTERNVFTWTGARALSPAL
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHEEEEEECCCEEEEECCHHCCCCE
IPAGAGSTGRVALRCFIDQSLKSEYEGVLSFDFDSAQEWVHFLYLRTPGGLKLEHIDSTH
EECCCCCCCCEEEEEEHHHHHHHHCCCEEEECCCCHHHHEEEEEEECCCCCEEEECCCCC
LKDATVLRRSVSPVVLYFAPEGHAEPQP
CHHHHHHHHCCCCEEEEECCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876