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The map label for this gene is glpQ

Identifier: 189025491

GI number: 189025491

Start: 269373

End: 270443

Strand: Direct

Name: glpQ

Synonym: TPASS_0257

Alternate gene names: 189025491

Gene position: 269373-270443 (Clockwise)

Preceding gene: 189025490

Following gene: 189025493

Centisome position: 23.64

GC content: 48.27

Gene sequence:

>1071_bases
ATGCGGGGAACATATTGTGTGACGCTTTGGGGGGGGGTGTTTGCGGCATTGGTTGCAGGCTGTGCGTCCGAACGTATGAT
AGTTGCGTATCGGGGCGCTGCAGGATATGTGCCCGAGCACACCTTTGCCTCGAAAGTTCTTGCTTTTGCACAAGGAGCAG
ATTACCTGCAGCAGGATGTCGTGCTTTCAAAGGATAATCAGCTTATCGTAGCGCAAAGCCATATTCTGGATAATATGACT
GACGTGGCAGAAAAATTTCCACGCCGGCAGCGTGCGGATGGGCATTTCTATGTCATAGATTTTACGGTAGAAGAACTTTC
CCTCCTCCGTGCAACCAATAGTTTCTATACGCGCGGTAAGCGACATACGCCGGTGTATGGCCAGCGCTTTCCTCTTTGGA
AGCCTGGTTTTAGGCTGCACACTTTTGAAGAGGAGTTGCAGTTTATCCGTGGGTTGGAACAGACAACCGGGAAAAAGATT
GGAATTTACTCTGAAATAAAGGTGCCGTGGTTTCATCATCAGGAAGGAAAAGACATCGCAGCGCTTACCCTCGCTCTGTT
GAAAAAATACGGTTACCAAAGTCGATCGGATCTAGTGTATGTGCAAACGTATGATTTTAACGAGCTGAAGCGTATCAAAC
GAGAACTTTTACCAAAGTACGAAATGAACGTGAAGCTGATTCAGCGTGTTGCTTACACAGATCAACGTGAAACACAGGAG
AAGGACTCGCGTGGGAAATGGATAAACTACAATTACAATTGGATGTTTGAGCCCGGTGGTATGCAGAAAATAGCAAAATA
TGCAGACGGCGTGGGTCCTGACTGGAGGATGCTCATAGAGAATGAATGGTCGAAGGTGGGCGCTGTTCGCCTGAGTCCGA
TGGTTTCTGCAATCCAAGATGCGAAATTGGAATGTCATGTGCACACGGTACGGAAAGAAACACTGCCTAGCTACGCGCGC
ACCATGGACGAGATGTTTTCCATTTTGTTCAAACAGACGGGCGCAAACGTGGTGCTCACGGATTTTCCTGATCTTGGGGT
AAAGTTTCTGGGCAAACCCGCCCGCTATTGA

Upstream 100 bases:

>100_bases
TTAAAACTGAAGGTAGGATCAGCGCTCAGTGGAGATATGCGGCGTGCTACTATGCACGGTGACGATCTGTGCATTCTATA
ACAGGGGAGGAGAGAAGTTT

Downstream 100 bases:

>100_bases
CCGGCTTCTGTGTAGTCCAGGCGATGTAAGTGTTCAGTGTCGCCTGGTACCGGTGGAGTTCGTTCTCAGTAGGTGTCGTT
CATCTCCATGAAGCGAGCAC

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRGTYCVTLWGGVFAALVAGCASERMIVAYRGAAGYVPEHTFASKVLAFAQGADYLQQDVVLSKDNQLIVAQSHILDNMT
DVAEKFPRRQRADGHFYVIDFTVEELSLLRATNSFYTRGKRHTPVYGQRFPLWKPGFRLHTFEEELQFIRGLEQTTGKKI
GIYSEIKVPWFHHQEGKDIAALTLALLKKYGYQSRSDLVYVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQE
KDSRGKWINYNYNWMFEPGGMQKIAKYADGVGPDWRMLIENEWSKVGAVRLSPMVSAIQDAKLECHVHTVRKETLPSYAR
TMDEMFSILFKQTGANVVLTDFPDLGVKFLGKPARY

Sequences:

>Translated_356_residues
MRGTYCVTLWGGVFAALVAGCASERMIVAYRGAAGYVPEHTFASKVLAFAQGADYLQQDVVLSKDNQLIVAQSHILDNMT
DVAEKFPRRQRADGHFYVIDFTVEELSLLRATNSFYTRGKRHTPVYGQRFPLWKPGFRLHTFEEELQFIRGLEQTTGKKI
GIYSEIKVPWFHHQEGKDIAALTLALLKKYGYQSRSDLVYVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQE
KDSRGKWINYNYNWMFEPGGMQKIAKYADGVGPDWRMLIENEWSKVGAVRLSPMVSAIQDAKLECHVHTVRKETLPSYAR
TMDEMFSILFKQTGANVVLTDFPDLGVKFLGKPARY
>Mature_356_residues
MRGTYCVTLWGGVFAALVAGCASERMIVAYRGAAGYVPEHTFASKVLAFAQGADYLQQDVVLSKDNQLIVAQSHILDNMT
DVAEKFPRRQRADGHFYVIDFTVEELSLLRATNSFYTRGKRHTPVYGQRFPLWKPGFRLHTFEEELQFIRGLEQTTGKKI
GIYSEIKVPWFHHQEGKDIAALTLALLKKYGYQSRSDLVYVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQE
KDSRGKWINYNYNWMFEPGGMQKIAKYADGVGPDWRMLIENEWSKVGAVRLSPMVSAIQDAKLECHVHTVRKETLPSYAR
TMDEMFSILFKQTGANVVLTDFPDLGVKFLGKPARY

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family

Homologues:

Organism=Escherichia coli, GI1788572, Length=338, Percent_Identity=52.0710059171598, Blast_Score=393, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLPQ_TREPA (O30405)

Other databases:

- EMBL:   AF004286
- EMBL:   U95744
- EMBL:   AE000520
- PIR:   F71346
- RefSeq:   NP_218698.1
- ProteinModelPortal:   O30405
- SMR:   O30405
- IntAct:   O30405
- MINT:   MINT-6481004
- GeneID:   2611763
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0257
- TIGR:   TP_0257
- HOGENOM:   HBG725117
- OMA:   YSYDWMF
- ProtClustDB:   PRK11143
- BioCyc:   TPAL243276:TP_0257-MONOMER
- BRENDA:   3.1.4.46
- InterPro:   IPR004129
- InterPro:   IPR017946
- Gene3D:   G3DSA:3.20.20.190
- PANTHER:   PTHR23344

Pfam domain/function: PF03009 GDPD; SSF51695 PLC-like_Pdiesterase_TIM-brl

EC number: =3.1.4.46

Molecular weight: Translated: 41015; Mature: 41015

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGTYCVTLWGGVFAALVAGCASERMIVAYRGAAGYVPEHTFASKVLAFAQGADYLQQDV
CCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHCC
VLSKDNQLIVAQSHILDNMTDVAEKFPRRQRADGHFYVIDFTVEELSLLRATNSFYTRGK
EECCCCCEEEEHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCC
RHTPVYGQRFPLWKPGFRLHTFEEELQFIRGLEQTTGKKIGIYSEIKVPWFHHQEGKDIA
CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEECEEEEECCCEEECCCCCHHH
ALTLALLKKYGYQSRSDLVYVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQE
HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH
KDSRGKWINYNYNWMFEPGGMQKIAKYADGVGPDWRMLIENEWSKVGAVRLSPMVSAIQD
HHCCCCEEEECEEEEECCCCHHHHHHHHCCCCCCCEEEEECCHHHHCCEEHHHHHHHHHC
AKLECHVHTVRKETLPSYARTMDEMFSILFKQTGANVVLTDFPDLGVKFLGKPARY
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCC
>Mature Secondary Structure
MRGTYCVTLWGGVFAALVAGCASERMIVAYRGAAGYVPEHTFASKVLAFAQGADYLQQDV
CCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHCC
VLSKDNQLIVAQSHILDNMTDVAEKFPRRQRADGHFYVIDFTVEELSLLRATNSFYTRGK
EECCCCCEEEEHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCC
RHTPVYGQRFPLWKPGFRLHTFEEELQFIRGLEQTTGKKIGIYSEIKVPWFHHQEGKDIA
CCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEECEEEEECCCEEECCCCCHHH
ALTLALLKKYGYQSRSDLVYVQTYDFNELKRIKRELLPKYEMNVKLIQRVAYTDQRETQE
HHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH
KDSRGKWINYNYNWMFEPGGMQKIAKYADGVGPDWRMLIENEWSKVGAVRLSPMVSAIQD
HHCCCCEEEECEEEEECCCCHHHHHHHHCCCCCCCEEEEECCHHHHCCEEHHHHHHHHHC
AKLECHVHTVRKETLPSYARTMDEMFSILFKQTGANVVLTDFPDLGVKFLGKPARY
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9311129; 9317025; 9665876