| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pgsA
Identifier: 189025490
GI number: 189025490
Start: 268626
End: 269276
Strand: Direct
Name: pgsA
Synonym: TPASS_0256
Alternate gene names: 189025490
Gene position: 268626-269276 (Clockwise)
Preceding gene: 189025489
Following gene: 189025491
Centisome position: 23.57
GC content: 47.77
Gene sequence:
>651_bases ATGAGGCTTTCTGACTTTTATACTGCGCTGAGACTGGCGTTGGTTCTCCCTTTCTTTGCACTCTATCATATGTCACGTTG GGTTGTTATGTACTTTCCTGCTGCCAATGTGGGGCGTGTGGTGTCTATCGCGTCGGTGCTGCTTTTTCTTTTCATTGCGT GCACTGATTTCCTCGACGGTTATTACGCGCGCAAGTCAGGGAAGTATTCTAGTTTTGGGAAGGTTTTCGATCCCTTTGCT GATGTGATAGCGAATGTAACTGTCATGCTTTGCCTCGTGGCAGACAACTTCATGCCGGTTTTTCTTTTTCTGTGTATTTT GTATCGGGAATTTGGAATGATGTTCCTGAGAATGCTTGCGTGTGGCGAAGGTCACGTAGTTGGTGCCCAGAGAATGGGAA AGCTGAAAACAGCCTCGTATATGGGTGCGGTCCTTTTTTCGCTTCTTTTGAAAGCATTGTACGCCTTTGAATTGGCTGGC GCGGATTGGTATGAGCGCATGCGTGCGGTTGGCCGCCTGGTGTACGTGGTGCCAGTGGTATTGGCTCTTGCTTCTTTTTT TTCTTACTTGAAGACTTTTTTCCCCATTCTCAAGCGCGTGTGTGGGCGTACCCGTTACCCTGTATGCAAGACATGTCGTG AATGGGATTAA
Upstream 100 bases:
>100_bases TAGATTCAGCAGGACGCATTGACAGGTTCAATAGGCGATACAAAATTCGAGGCTAGGAGTACACCTGTGGTGTACCATTA CGTCTTTCCCCTAGGTGAGT
Downstream 100 bases:
>100_bases AACTGAAGGTAGGATCAGCGCTCAGTGGAGATATGCGGCGTGCTACTATGCACGGTGACGATCTGTGCATTCTATAACAG GGGAGGAGAGAAGTTTATGC
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRLSDFYTALRLALVLPFFALYHMSRWVVMYFPAANVGRVVSIASVLLFLFIACTDFLDGYYARKSGKYSSFGKVFDPFA DVIANVTVMLCLVADNFMPVFLFLCILYREFGMMFLRMLACGEGHVVGAQRMGKLKTASYMGAVLFSLLLKALYAFELAG ADWYERMRAVGRLVYVVPVVLALASFFSYLKTFFPILKRVCGRTRYPVCKTCREWD
Sequences:
>Translated_216_residues MRLSDFYTALRLALVLPFFALYHMSRWVVMYFPAANVGRVVSIASVLLFLFIACTDFLDGYYARKSGKYSSFGKVFDPFA DVIANVTVMLCLVADNFMPVFLFLCILYREFGMMFLRMLACGEGHVVGAQRMGKLKTASYMGAVLFSLLLKALYAFELAG ADWYERMRAVGRLVYVVPVVLALASFFSYLKTFFPILKRVCGRTRYPVCKTCREWD >Mature_216_residues MRLSDFYTALRLALVLPFFALYHMSRWVVMYFPAANVGRVVSIASVLLFLFIACTDFLDGYYARKSGKYSSFGKVFDPFA DVIANVTVMLCLVADNFMPVFLFLCILYREFGMMFLRMLACGEGHVVGAQRMGKLKTASYMGAVLFSLLLKALYAFELAG ADWYERMRAVGRLVYVVPVVLALASFFSYLKTFFPILKRVCGRTRYPVCKTCREWD
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PGSA_TREPA (O66076)
Other databases:
- EMBL: U95744 - EMBL: AE000520 - PIR: E71346 - RefSeq: NP_218697.1 - ProteinModelPortal: O66076 - IntAct: O66076 - GeneID: 2611722 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0256 - NMPDR: fig|243276.1.peg.256 - TIGR: TP_0256 - HOGENOM: HBG686655 - OMA: AAATIFI - ProtClustDB: CLSK218612 - BioCyc: TPAL243276:TP_0256-MONOMER - BRENDA: 2.7.8.5 - InterPro: IPR000462 - InterPro: IPR004570 - PIRSF: PIRSF000847 - TIGRFAMs: TIGR00560
Pfam domain/function: PF01066 CDP-OH_P_transf
EC number: =2.7.8.5
Molecular weight: Translated: 24639; Mature: 24639
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1fe15118)-; HASH(0x20bd8f04)-; HASH(0x208d22a4)-; HASH(0x1f263c70)-;
Cys/Met content:
3.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSDFYTALRLALVLPFFALYHMSRWVVMYFPAANVGRVVSIASVLLFLFIACTDFLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH YYARKSGKYSSFGKVFDPFADVIANVTVMLCLVADNFMPVFLFLCILYREFGMMFLRMLA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CGEGHVVGAQRMGKLKTASYMGAVLFSLLLKALYAFELAGADWYERMRAVGRLVYVVPVV CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LALASFFSYLKTFFPILKRVCGRTRYPVCKTCREWD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCH >Mature Secondary Structure MRLSDFYTALRLALVLPFFALYHMSRWVVMYFPAANVGRVVSIASVLLFLFIACTDFLDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH YYARKSGKYSSFGKVFDPFADVIANVTVMLCLVADNFMPVFLFLCILYREFGMMFLRMLA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CGEGHVVGAQRMGKLKTASYMGAVLFSLLLKALYAFELAGADWYERMRAVGRLVYVVPVV CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LALASFFSYLKTFFPILKRVCGRTRYPVCKTCREWD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876