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The map label for this gene is 189025405

Identifier: 189025405

GI number: 189025405

Start: 192753

End: 193280

Strand: Reverse

Name: 189025405

Synonym: TPASS_0172

Alternate gene names: NA

Gene position: 193280-192753 (Counterclockwise)

Preceding gene: 189025406

Following gene: 189025395

Centisome position: 16.96

GC content: 54.73

Gene sequence:

>528_bases
GTGAGCGACCTCGAAGGTTTACATTTGTACAACCATTCTGACGAGGAGCTTTTTTCCATACATGACTCGGTGTTCCAGGA
ACATACAGGGGGGGAGGGCCGGATGTCTTCCTCTTCCGGTGAGGAAGGGTGCGGGCAGACGCTGCTTCCCGTTCATGAAA
AAAAGAGCACCTATGGTCTTTTCAATCCCTTAACCGGGGTCGGTTGGCGGGCCTATCTGGAGGAAAGGCTTGAGGCAGAA
TTAGGACGCGCCACCGCTTCCGAACAAGACCTAACGCTAATGATAGTACAGGTGGAGCACCCCGCGCACCAGACAGCCGT
TGCGGACGCAGCGAAAAAGCTCGTGGAGTTCTTCAAATTTCGGGATATGCTCTTTGAATTCGAGGGTAGTTGCTGCTTCG
CGGGTATCGTACAAGACGCAAGCCTCGAAGAGCGATGGTACTCGCGAGGGATATACACAAGGAGCTGTGCGGCGCCATTG
AGAGCGCACGCGTCCTTATCGGCATCGCGACGCGTACGTCCAGACTAA

Upstream 100 bases:

>100_bases
TCTCGGACAGACGAGGCCCAGGTNTCGCCTGGTACACCGCCTGAGTGTCCAGTGTCCGTCTTTTGAAACTCATGGGCAGG
ACCTTGCTTCTAAGGAGAGC

Downstream 100 bases:

>100_bases
CTACCGCGGCCCACTTAATTGAGGAGGCGCACGCGTCGGTGAAGAGGGCGCGAGAAGACCCCGCACACCCCATCATCGCT
TTCGAGGCCCCCCACCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSDLEGLHLYNHSDEELFSIHDSVFQEHTGGEGRMSSSSGEEGCGQTLLPVHEKKSTYGLFNPLTGVGWRAYLEERLEAE
LGRATASEQDLTLMIVQVEHPAHQTAVADAAKKLVEFFKFRDMLFEFEGSCCFAGIVQDASLEERWYSRGIYTRSCAAPL
RAHASLSASRRVRPD

Sequences:

>Translated_175_residues
MSDLEGLHLYNHSDEELFSIHDSVFQEHTGGEGRMSSSSGEEGCGQTLLPVHEKKSTYGLFNPLTGVGWRAYLEERLEAE
LGRATASEQDLTLMIVQVEHPAHQTAVADAAKKLVEFFKFRDMLFEFEGSCCFAGIVQDASLEERWYSRGIYTRSCAAPL
RAHASLSASRRVRPD
>Mature_174_residues
SDLEGLHLYNHSDEELFSIHDSVFQEHTGGEGRMSSSSGEEGCGQTLLPVHEKKSTYGLFNPLTGVGWRAYLEERLEAEL
GRATASEQDLTLMIVQVEHPAHQTAVADAAKKLVEFFKFRDMLFEFEGSCCFAGIVQDASLEERWYSRGIYTRSCAAPLR
AHASLSASRRVRPD

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y172_TREPA (O83202)

Other databases:

- EMBL:   AE000520
- PIR:   A71358
- RefSeq:   NP_218611.1
- ProteinModelPortal:   O83202
- GeneID:   2611359
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0172
- NMPDR:   fig|243276.1.peg.170
- TIGR:   TP_0172
- HOGENOM:   HBG731921
- ProtClustDB:   CLSK2300154
- BioCyc:   TPAL243276:TP_0172-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19544; Mature: 19413

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLEGLHLYNHSDEELFSIHDSVFQEHTGGEGRMSSSSGEEGCGQTLLPVHEKKSTYGL
CCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FNPLTGVGWRAYLEERLEAELGRATASEQDLTLMIVQVEHPAHQTAVADAAKKLVEFFKF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
RDMLFEFEGSCCFAGIVQDASLEERWYSRGIYTRSCAAPLRAHASLSASRRVRPD
HHHHHHHCCCEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDLEGLHLYNHSDEELFSIHDSVFQEHTGGEGRMSSSSGEEGCGQTLLPVHEKKSTYGL
CCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FNPLTGVGWRAYLEERLEAELGRATASEQDLTLMIVQVEHPAHQTAVADAAKKLVEFFKF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
RDMLFEFEGSCCFAGIVQDASLEERWYSRGIYTRSCAAPLRAHASLSASRRVRPD
HHHHHHHCCCEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876