Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025369

Identifier: 189025369

GI number: 189025369

Start: 156704

End: 157645

Strand: Reverse

Name: 189025369

Synonym: TPASS_0135

Alternate gene names: NA

Gene position: 157645-156704 (Counterclockwise)

Preceding gene: 189025372

Following gene: 189025368

Centisome position: 13.84

GC content: 59.02

Gene sequence:

>942_bases
ATGCGCGCGTCAGAGGTGATAGCGGATATCTACCCCGGCGGTGACAAACTGCGCAGTGCGCGTGTTAGTCTGCTCTCTCT
CTTCTTCAACCACTTTTTCGCACGACCGGGGTACGCCGCTATATGCAGCACTGGCACCCAAGGACCAGCGCTCTGTCAGC
TGAAGGTAACAGCCGGCCCCTGCTTTGAGCAAAAGACCGTAGTACGTAGACGTGTAGTAGTGCTGGTAGCTGAAGCCGGC
CCCCACCGTCAGCGGCAGACGGATGCGCCAGAAGGCGAGCGTGTAACTTGCATTCAGCGTTACAGGAACGGCAAGGTAGG
AACACAGCCGCTCCTTCTCGTAATAGAACGGATAACTGCAGGAGTGCTGCGCGCTCGCATCAATCCCGAGCGACAAGCCG
CGATACACAAAATACTCGTATCCAAAAGACACCCCAAACGCGGGGTAAACTTCCTTATTCCCGTTGGCTGCAACGCCCCC
AGATCCCCGCGGGCGGTATTGCACCAGTCCACCTGGAAAAGGGGCACCGCGCCAATAAACGAAACGCGCGCGATCCCCCG
CCCCGCGGCGGTTACATCCCACGATGCGGCAGGCGCCACCTCCTGCGCATACGCTGCACCCGCGGCAACACCCACCCCGC
AGCGCAGACCTGCAGAAAGCGTATCCCGTGTGCCGCGCACTGTTTTAGCTGTTTCATACGTTTTTTCGCTCCACACCTTT
CAAAAAGCTGCGGGCAACCCACACAGCCTTCCAAAATTCTACCCCCCCCCGGCCAACATTTGTCGAGTTCTTTTTTTGCA
GGAGGGTCGCGCCCCGCGCACCACCGCTGCATACCCAGTGCGCGCCTGTAACATTCTGACCGGGGAGGTGTTTTCTCACA
CTGGGGAGGTTTTATGTGCAAACCGCGCGTGTGGCGCATCGCCCACACCATCGTCCATGTAG

Upstream 100 bases:

>100_bases
GCCGTGCACGCAGTGCCTGTACCGCCTTCCATGATACCCCGACACTGCGCGGCGCGCAACACGATGTACTGCATTCGGCG
GCATGCCCAGGACTCGGCGG

Downstream 100 bases:

>100_bases
GCGCGTTGCTGCTCGGCACCAGCCAGCTGACAACCTGTGATTTCTCCGGCATTTTTGCCACCATTCAGCAGGAAGTTGCC
ATTAAGTCGCCGTCTATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRASEVIADIYPGGDKLRSARVSLLSLFFNHFFARPGYAAICSTGTQGPALCQLKVTAGPCFEQKTVVRRRVVVLVAEAG
PHRQRQTDAPEGERVTCIQRYRNGKVGTQPLLLVIERITAGVLRARINPERQAAIHKILVSKRHPKRGVNFLIPVGCNAP
RSPRAVLHQSTWKRGTAPINETRAIPRPAAVTSHDAAGATSCAYAAPAATPTPQRRPAESVSRVPRTVLAVSYVFSLHTF
QKAAGNPHSLPKFYPPPANICRVLFLQEGRAPRTTAAYPVRACNILTGEVFSHTGEVLCANRACGASPTPSSM

Sequences:

>Translated_313_residues
MRASEVIADIYPGGDKLRSARVSLLSLFFNHFFARPGYAAICSTGTQGPALCQLKVTAGPCFEQKTVVRRRVVVLVAEAG
PHRQRQTDAPEGERVTCIQRYRNGKVGTQPLLLVIERITAGVLRARINPERQAAIHKILVSKRHPKRGVNFLIPVGCNAP
RSPRAVLHQSTWKRGTAPINETRAIPRPAAVTSHDAAGATSCAYAAPAATPTPQRRPAESVSRVPRTVLAVSYVFSLHTF
QKAAGNPHSLPKFYPPPANICRVLFLQEGRAPRTTAAYPVRACNILTGEVFSHTGEVLCANRACGASPTPSSM
>Mature_313_residues
MRASEVIADIYPGGDKLRSARVSLLSLFFNHFFARPGYAAICSTGTQGPALCQLKVTAGPCFEQKTVVRRRVVVLVAEAG
PHRQRQTDAPEGERVTCIQRYRNGKVGTQPLLLVIERITAGVLRARINPERQAAIHKILVSKRHPKRGVNFLIPVGCNAP
RSPRAVLHQSTWKRGTAPINETRAIPRPAAVTSHDAAGATSCAYAAPAATPTPQRRPAESVSRVPRTVLAVSYVFSLHTF
QKAAGNPHSLPKFYPPPANICRVLFLQEGRAPRTTAAYPVRACNILTGEVFSHTGEVLCANRACGASPTPSSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y135_TREPA (O83171)

Other databases:

- EMBL:   AE000520
- PIR:   D71363
- RefSeq:   NP_218575.1
- ProteinModelPortal:   O83171
- IntAct:   O83171
- GeneID:   2610987
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0135
- NMPDR:   fig|243276.1.peg.134
- TIGR:   TP_0135
- HOGENOM:   HBG250907
- ProtClustDB:   CLSK2300141
- BioCyc:   TPAL243276:TP_0135-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33849; Mature: 33849

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASEVIADIYPGGDKLRSARVSLLSLFFNHFFARPGYAAICSTGTQGPALCQLKVTAGP
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCC
CFEQKTVVRRRVVVLVAEAGPHRQRQTDAPEGERVTCIQRYRNGKVGTQPLLLVIERITA
CHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
GVLRARINPERQAAIHKILVSKRHPKRGVNFLIPVGCNAPRSPRAVLHQSTWKRGTAPIN
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
ETRAIPRPAAVTSHDAAGATSCAYAAPAATPTPQRRPAESVSRVPRTVLAVSYVFSLHTF
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QKAAGNPHSLPKFYPPPANICRVLFLQEGRAPRTTAAYPVRACNILTGEVFSHTGEVLCA
HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
NRACGASPTPSSM
CCCCCCCCCCCCC
>Mature Secondary Structure
MRASEVIADIYPGGDKLRSARVSLLSLFFNHFFARPGYAAICSTGTQGPALCQLKVTAGP
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCC
CFEQKTVVRRRVVVLVAEAGPHRQRQTDAPEGERVTCIQRYRNGKVGTQPLLLVIERITA
CHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
GVLRARINPERQAAIHKILVSKRHPKRGVNFLIPVGCNAPRSPRAVLHQSTWKRGTAPIN
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
ETRAIPRPAAVTSHDAAGATSCAYAAPAATPTPQRRPAESVSRVPRTVLAVSYVFSLHTF
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QKAAGNPHSLPKFYPPPANICRVLFLQEGRAPRTTAAYPVRACNILTGEVFSHTGEVLCA
HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
NRACGASPTPSSM
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876