| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025368
Identifier: 189025368
GI number: 189025368
Start: 155622
End: 156752
Strand: Reverse
Name: 189025368
Synonym: TPASS_0134
Alternate gene names: NA
Gene position: 156752-155622 (Counterclockwise)
Preceding gene: 189025369
Following gene: 189025367
Centisome position: 13.76
GC content: 57.29
Gene sequence:
>1131_bases ATGTGCAAACCGCGCGTGTGGCGCATCGCCCACACCATCGTCCATGTAGGCGCGTTGCTGCTCGGCACCAGCCAGCTGAC AACCTGTGATTTCTCCGGCATTTTTGCCACCATTCAGCAGGAAGTTGCCATTAAGTCGCCGTCTATTCCGGGGGCGATTT ATGGCCTGGTCAAGGCCGGGGATAAGCTCTATGCCACCAACGGTCGGCTTTGGGAAAAGGAGCTGAACGGCATTAAGTGG AAGCCGGTGCCTTTTCTTGACGGCCAAGATAAGCGAATTGATAGCCTTGCAGCCAGCAACACGTGCGTATTTGCCTGTGT TTCAGGAGACGGTGTGTACAAATACACCGCCGGCACCACCTCTTCGCAGAAGGAGAGTAATACGGATAAAGCGCAGGCGG TGGTACAGATGTCGGACGGAAAAGTGGTCCTGCAGTGTGCCTTGGGGGATGAAAAGACGACCCCGAGCGACGCAGACGAA AGGTTGCTGGGGGGCGGCCAGGGCTACCTCGTCACATCCAAGGGATTTTACACCCTCCCAGGGTCAGCCTCCTGCGAGGT TATCTCCGAAACAAAGGACGTCACCTGTAAGGCAGAGGCGCCGATCCTCGCCAGCGCCTGCGATGGCAGCAATACCTATA TCCTTACCAAGGACAAGGTGTACTGCCGGTATACGAACGGCTCAGGGAGCACCCCCACTACGTGGTGCGACGTGGAACAC AAGGTATCAGAGCCGCTTGCGCTTGCAGTGTTCAAAAATAAGGGTGAGACGTTCTTGCTCGTTGGGGGACAGCAGGGATA CGGGGAAATAAAAATAGCCACGGCAAGCGGCAGCTCCTCTTCTTCCTCATGCGTTCCCCTCACGGCGGAAAACGTGCACG CCACCACCGGGTGGGGCACCAACTGCTCCACCCCGGAAGGCAGCGCCGAGCAGTATCGTAGTACGATCGGCCGCTGGGCA GTGAGCGGTATTTACGTAATCAAAAAAGACACTAGCGGTGGGCGGAAAAAGCGGAGCACCTCAACAGACTGCGAAAGACC AGACCTCTACGTGGCGGTGGGGGATGCGAGCGACACCTACACCGGGCTCTGGAAGTTCGACACCGCTACGAATACCTGGA ATCGCGAGTGA
Upstream 100 bases:
>100_bases TTTTGCAGGAGGGTCGCGCCCCGCGCACCACCGCTGCATACCCAGTGCGCGCCTGTAACATTCTGACCGGGGAGGTGTTT TCTCACACTGGGGAGGTTTT
Downstream 100 bases:
>100_bases TGGCGCGCAGCAGATGCGTGCACCGCGTGGTGCACCAGGCAGCGTGCATCGGGGTGATAGGCCTGAGCACCAGCGCGCTG ACCACGTGCGATTTCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGDKLYATNGRLWEKELNGIKW KPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTTSSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADE RLLGGGQGYLVTSKGFYTLPGSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGTNCSTPEGSAEQYRSTIGRWA VSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTYTGLWKFDTATNTWNRE
Sequences:
>Translated_376_residues MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGDKLYATNGRLWEKELNGIKW KPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTTSSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADE RLLGGGQGYLVTSKGFYTLPGSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGTNCSTPEGSAEQYRSTIGRWA VSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTYTGLWKFDTATNTWNRE >Mature_376_residues MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGDKLYATNGRLWEKELNGIKW KPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTTSSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADE RLLGGGQGYLVTSKGFYTLPGSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGTNCSTPEGSAEQYRSTIGRWA VSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTYTGLWKFDTATNTWNRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TP013X lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40131; Mature: 40131
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAG CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEECCCCCCHHHHHHHHCC DKLYATNGRLWEKELNGIKWKPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTT CEEEECCCEEEHHHHCCCEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEECCCC SSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADERLLGGGQGYLVTSKGFYTLP CCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCEEECC GSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH CCCCEEEEECCCCEEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEEECCCH KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGT HCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCC NCSTPEGSAEQYRSTIGRWAVSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTY CCCCCCCCHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCE TGLWKFDTATNTWNRE EEEEEECCCCCCCCCC >Mature Secondary Structure MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAG CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEECCCCCCHHHHHHHHCC DKLYATNGRLWEKELNGIKWKPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTT CEEEECCCEEEHHHHCCCEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEECCCC SSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADERLLGGGQGYLVTSKGFYTLP CCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCEEECC GSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH CCCCEEEEECCCCEEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEEECCCH KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGT HCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCC NCSTPEGSAEQYRSTIGRWAVSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTY CCCCCCCCHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCE TGLWKFDTATNTWNRE EEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]