| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025361
Identifier: 189025361
GI number: 189025361
Start: 149847
End: 150227
Strand: Direct
Name: 189025361
Synonym: TPASS_0127
Alternate gene names: NA
Gene position: 149847-150227 (Clockwise)
Preceding gene: 189025359
Following gene: 189025362
Centisome position: 13.15
GC content: 54.86
Gene sequence:
>381_bases ATGCTAGGATGGGGAATGGATATGTCCAAAAGTGTGATGCTGTGTTGCCTGTTGAGTGTACAACCCTGTTATGCCGGGTA CGTGTTTGTTTCCCCAAAGCTTGGCGTGTATGGAGAAGCATTGGGCGGTCCTGACACGGTGGGTAAAGCGGTCAAGCAGG CCGACGGTACTAAGATTGCTCCGAAGATATGGTACTACGCGCCGCGTACCCCGCTTTTTGGCGTGGATATAGGCTATCAG GCGGATAACGGCCTGTTGTTCCGGGTGAATTTGGATGCGGCACTCACGCGCCTTATGTTTCGCAGCCAGTGTGTGGTGGG CTATTCCTTGCGGTTCGGCTGGGGGGGGGTACGTCTCTATCGCTTCGGGAATCGAGTGTAG
Upstream 100 bases:
>100_bases GGTGTGGTGAGAAAGACACCCTGAAATACATTGCTCTACTTCGTACCAGGAACTGCAGCAGCAGGGGGAACAGGGACACC CTGGGTGAAAAGACTGCACC
Downstream 100 bases:
>100_bases TGCAACGGTCGATGACGCGCAGTACGAGCCCTACACGAAAAATGAGCAGGGGACTACTGTTGCCTCCAACACCGTGTTCC CGTGCACGGTCTTGGAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MLGWGMDMSKSVMLCCLLSVQPCYAGYVFVSPKLGVYGEALGGPDTVGKAVKQADGTKIAPKIWYYAPRTPLFGVDIGYQ ADNGLLFRVNLDAALTRLMFRSQCVVGYSLRFGWGGVRLYRFGNRV
Sequences:
>Translated_126_residues MLGWGMDMSKSVMLCCLLSVQPCYAGYVFVSPKLGVYGEALGGPDTVGKAVKQADGTKIAPKIWYYAPRTPLFGVDIGYQ ADNGLLFRVNLDAALTRLMFRSQCVVGYSLRFGWGGVRLYRFGNRV >Mature_126_residues MLGWGMDMSKSVMLCCLLSVQPCYAGYVFVSPKLGVYGEALGGPDTVGKAVKQADGTKIAPKIWYYAPRTPLFGVDIGYQ ADNGLLFRVNLDAALTRLMFRSQCVVGYSLRFGWGGVRLYRFGNRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To T.pallidum TP_0315, TP_0618 and TP_0619 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13858; Mature: 13858
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGWGMDMSKSVMLCCLLSVQPCYAGYVFVSPKLGVYGEALGGPDTVGKAVKQADGTKIA CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEC PKIWYYAPRTPLFGVDIGYQADNGLLFRVNLDAALTRLMFRSQCVVGYSLRFGWGGVRLY CEEEEECCCCCEEEEECCEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEEE RFGNRV ECCCCC >Mature Secondary Structure MLGWGMDMSKSVMLCCLLSVQPCYAGYVFVSPKLGVYGEALGGPDTVGKAVKQADGTKIA CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEC PKIWYYAPRTPLFGVDIGYQADNGLLFRVNLDAALTRLMFRSQCVVGYSLRFGWGGVRLY CEEEEECCCCCEEEEECCEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEEE RFGNRV ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]