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The map label for this gene is 189025327

Identifier: 189025327

GI number: 189025327

Start: 102091

End: 102738

Strand: Direct

Name: 189025327

Synonym: TPASS_0093

Alternate gene names: NA

Gene position: 102091-102738 (Clockwise)

Preceding gene: 189025326

Following gene: 189025328

Centisome position: 8.96

GC content: 55.25

Gene sequence:

>648_bases
ATGCGTACCTGTCCTGATTGTGCTGCTTGGTGTGCTTATGTGGACGGAGAAGGTTCGCAACTGCAACGCCGTGAGATGTG
CGCGCATCTGCAGGGTTGCACACACTGTGCCACGTGTGTGGCGCACTATCGCGCCATGCGGAGTCTTGTCAAGCATGCTG
ATCGCGTTTCTTCCCGTGATTTTACAATGGCTTTTCCATATTTGCGCGTGCGTCACCGTGTCGCTTCCTGTATGCCGAGG
CCGTGGTGGCAGGCACGTTCCTCTCCTCTTTCTGCTGCAGGACCGGTCCGTGCTGCGGCACTCGCTGTGGCGGTCGCATC
TTTATGTGTATGCACCCTGTTGCTTACTCATATTGTTGAAAGGCGTCCTGTATCCCGTGCGGGTGAGGCGAGTTTTACCC
CCATTGTACCTATGCGTGTTCGCGCCCCTGTTGGGTACGCGCGCGGTGTGAAAGTGTTTGGTCCTGCCGTTAGTGCGAAT
TCCAACGTGCTGCGCAAACCAGCTGCGGTGTTCACCGTCTGTGCGTTTGCGCAGTTGTATGGCTCAGATCCTGCGTATGA
AATGGAAACAGTGCCGGTGAGGCTATCGGTTATTCCTGTGCCTTCCTATGTGCTCAATGCTTCAAAAGCGCAGTTCTTTT
CCCCATAA

Upstream 100 bases:

>100_bases
TACAAGGAGATCGGACGTATCCTGGGCATCAGCGAGGGGAATGTAAAGGTGAGGGTGTTCAGAGCGCGCGAACGATTAGC
GAAGTATTTAGGAGAGACGG

Downstream 100 bases:

>100_bases
TCCAGGCAAATGTGTAGTAAAAATAATGCGCCCGCGCGGACGTGTTTCCTGTTCTTTTCAAACCGTTCTGATCGTTGGGT
GTTCCTGTCTGCAAACTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLVKHADRVSSRDFTMAFPYLRVRHRVASCMPR
PWWQARSSPLSAAGPVRAAALAVAVASLCVCTLLLTHIVERRPVSRAGEASFTPIVPMRVRAPVGYARGVKVFGPAVSAN
SNVLRKPAAVFTVCAFAQLYGSDPAYEMETVPVRLSVIPVPSYVLNASKAQFFSP

Sequences:

>Translated_215_residues
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLVKHADRVSSRDFTMAFPYLRVRHRVASCMPR
PWWQARSSPLSAAGPVRAAALAVAVASLCVCTLLLTHIVERRPVSRAGEASFTPIVPMRVRAPVGYARGVKVFGPAVSAN
SNVLRKPAAVFTVCAFAQLYGSDPAYEMETVPVRLSVIPVPSYVLNASKAQFFSP
>Mature_215_residues
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLVKHADRVSSRDFTMAFPYLRVRHRVASCMPR
PWWQARSSPLSAAGPVRAAALAVAVASLCVCTLLLTHIVERRPVSRAGEASFTPIVPMRVRAPVGYARGVKVFGPAVSAN
SNVLRKPAAVFTVCAFAQLYGSDPAYEMETVPVRLSVIPVPSYVLNASKAQFFSP

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y093_TREPA (O83131)

Other databases:

- EMBL:   AE000520
- PIR:   F71368
- RefSeq:   NP_218533.1
- ProteinModelPortal:   O83131
- GeneID:   2611275
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0093
- NMPDR:   fig|243276.1.peg.92
- TIGR:   TP_0093
- HOGENOM:   HBG251091
- ProtClustDB:   CLSK382634
- BioCyc:   TPAL243276:TP_0093-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23444; Mature: 23444

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x20192cd0)-;

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLVKHADRVSSRD
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FTMAFPYLRVRHRVASCMPRPWWQARSSPLSAAGPVRAAALAVAVASLCVCTLLLTHIVE
HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRPVSRAGEASFTPIVPMRVRAPVGYARGVKVFGPAVSANSNVLRKPAAVFTVCAFAQLY
CCCCCCCCCCCCCCCCCEEEECCCCHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GSDPAYEMETVPVRLSVIPVPSYVLNASKAQFFSP
CCCCCCEEEECEEEEEEEECCHHHHCCCCHHCCCH
>Mature Secondary Structure
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLVKHADRVSSRD
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FTMAFPYLRVRHRVASCMPRPWWQARSSPLSAAGPVRAAALAVAVASLCVCTLLLTHIVE
HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRPVSRAGEASFTPIVPMRVRAPVGYARGVKVFGPAVSANSNVLRKPAAVFTVCAFAQLY
CCCCCCCCCCCCCCCCCEEEECCCCHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GSDPAYEMETVPVRLSVIPVPSYVLNASKAQFFSP
CCCCCCEEEECEEEEEEEECCHHHHCCCCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876