Click here to switch to the map view.

The map label for this gene is 189025281

Identifier: 189025281

GI number: 189025281

Start: 56515

End: 57036

Strand: Reverse

Name: 189025281

Synonym: TPASS_0047

Alternate gene names: NA

Gene position: 57036-56515 (Counterclockwise)

Preceding gene: 189025282

Following gene: 189025280

Centisome position: 5.01

GC content: 46.74

Gene sequence:

>522_bases
ATGGGATATCGCGTAGGAAATTCTGACTCTACGTCTTTACTGTCCGCATTCGCTCCTCCTGAGAGAGCCAAAAAAAAGTC
AAAAGAAAAACGGCCCCTGCAGGCTGCGCGCTTTCTCTCCCTCCTATATCCTAAGACGGACCCGCACTCTGCAGTGCAGG
ATCCGTCTCTTGTTCACGAAGAACATCAGACACGGTTGGCGTATCTGCAAGATCGCCTATGCTCCACAGGGGATATATTA
AAAAACACGCGCACGCTAGAAACCATCGCCGCATATAAACAGGCGGTCAAAGAATTTGTCCAATACGCGATTAAGCACAA
TTACACCACTGAGTCAAAAAGCAGTATCAGGATAGACAGGGGAACAGGTATGCCTGATACGGTAATATTTACAAAAATAA
AGGTCATTGACCAAAAGCTGGCTTCCTTTGTAAGGGAGCTCATGTCTCACCAGGTAGATCAACTCACGGTTTTACAGAAA
ACGGAGGAAATCTACGGTATGCTCGTGGACCTACTGATCTAG

Upstream 100 bases:

>100_bases
AAGAGGGATTCAACAAAGTGCTCAAGGCCTATCTCGGTCGTAAAAGTATTCATACGTCTGCGTTTGGATACAACAAGTAC
AGCAAGTCAGGATAAAGCGG

Downstream 100 bases:

>100_bases
CACTAAGGAAACTTATCATGATACCTAAACTGAGCCCAAATGCTGACCCCTGCACAGCGTGTGCTTCCACCCCTGCCTTT
CCGCCGCAGCCCATGGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGYRVGNSDSTSLLSAFAPPERAKKKSKEKRPLQAARFLSLLYPKTDPHSAVQDPSLVHEEHQTRLAYLQDRLCSTGDIL
KNTRTLETIAAYKQAVKEFVQYAIKHNYTTESKSSIRIDRGTGMPDTVIFTKIKVIDQKLASFVRELMSHQVDQLTVLQK
TEEIYGMLVDLLI

Sequences:

>Translated_173_residues
MGYRVGNSDSTSLLSAFAPPERAKKKSKEKRPLQAARFLSLLYPKTDPHSAVQDPSLVHEEHQTRLAYLQDRLCSTGDIL
KNTRTLETIAAYKQAVKEFVQYAIKHNYTTESKSSIRIDRGTGMPDTVIFTKIKVIDQKLASFVRELMSHQVDQLTVLQK
TEEIYGMLVDLLI
>Mature_172_residues
GYRVGNSDSTSLLSAFAPPERAKKKSKEKRPLQAARFLSLLYPKTDPHSAVQDPSLVHEEHQTRLAYLQDRLCSTGDILK
NTRTLETIAAYKQAVKEFVQYAIKHNYTTESKSSIRIDRGTGMPDTVIFTKIKVIDQKLASFVRELMSHQVDQLTVLQKT
EEIYGMLVDLLI

Specific function: Unknown

COG id: COG1728

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19642; Mature: 19511

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRVGNSDSTSLLSAFAPPERAKKKSKEKRPLQAARFLSLLYPKTDPHSAVQDPSLVHE
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCHHHHH
EHQTRLAYLQDRLCSTGDILKNTRTLETIAAYKQAVKEFVQYAIKHNYTTESKSSIRIDR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
GTGMPDTVIFTKIKVIDQKLASFVRELMSHQVDQLTVLQKTEEIYGMLVDLLI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GYRVGNSDSTSLLSAFAPPERAKKKSKEKRPLQAARFLSLLYPKTDPHSAVQDPSLVHE
CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCHHHHH
EHQTRLAYLQDRLCSTGDILKNTRTLETIAAYKQAVKEFVQYAIKHNYTTESKSSIRIDR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
GTGMPDTVIFTKIKVIDQKLASFVRELMSHQVDQLTVLQKTEEIYGMLVDLLI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA