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The map label for this gene is 189025282

Identifier: 189025282

GI number: 189025282

Start: 57042

End: 57473

Strand: Reverse

Name: 189025282

Synonym: TPASS_0048

Alternate gene names: NA

Gene position: 57473-57042 (Counterclockwise)

Preceding gene: 189025283

Following gene: 189025281

Centisome position: 5.04

GC content: 51.85

Gene sequence:

>432_bases
ATGGCAAAGATTGAGCGTCGCTCCATGAACACGCTTATTGGTGCAGGCTCCCGTATCAGCGGGAACGTTGTTGTCCCCGG
TTCAGTTCGCATTGAAGGGGATGTCGATGGGGACGTTATCACTACAGGGCACGTGGTAATCGGGAAGCGCGCGCGTGTCC
GCGGCGTCATACGGGTAGGGAGCATCATCGTAGGAGGAATGGTTGAAGGAGATATCGTTGCGTCAGAGGCGGTGCAGGTG
CTCCCTTCTGGAGTTATTCTGGGCGCAGTGCTTACCCGAAAAATTGTGGTGGACGAGCAAGCTTTTTTGGATGGTTTTTG
CTATGCAGTGGCAGATCAAGAGGGATTCAACAAAGTGCTCAAGGCCTATCTCGGTCGTAAAAGTATTCATACGTCTGCGT
TTGGATACAACAAGTACAGCAAGTCAGGATAA

Upstream 100 bases:

>100_bases
GCACTATGAAATACATATCGGCTCTGACGTTGTCGATCCTGGTAAATACCTCAACGTCAAAACTGCAGGGGCAGGATAGT
GTCTCAACAGGATGGAATAC

Downstream 100 bases:

>100_bases
AGCGGATGGGATATCGCGTAGGAAATTCTGACTCTACGTCTTTACTGTCCGCATTCGCTCCTCCTGAGAGAGCCAAAAAA
AAGTCAAAAGAAAAACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAKIERRSMNTLIGAGSRISGNVVVPGSVRIEGDVDGDVITTGHVVIGKRARVRGVIRVGSIIVGGMVEGDIVASEAVQV
LPSGVILGAVLTRKIVVDEQAFLDGFCYAVADQEGFNKVLKAYLGRKSIHTSAFGYNKYSKSG

Sequences:

>Translated_143_residues
MAKIERRSMNTLIGAGSRISGNVVVPGSVRIEGDVDGDVITTGHVVIGKRARVRGVIRVGSIIVGGMVEGDIVASEAVQV
LPSGVILGAVLTRKIVVDEQAFLDGFCYAVADQEGFNKVLKAYLGRKSIHTSAFGYNKYSKSG
>Mature_142_residues
AKIERRSMNTLIGAGSRISGNVVVPGSVRIEGDVDGDVITTGHVVIGKRARVRGVIRVGSIIVGGMVEGDIVASEAVQVL
PSGVILGAVLTRKIVVDEQAFLDGFCYAVADQEGFNKVLKAYLGRKSIHTSAFGYNKYSKSG

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15064; Mature: 14932

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIERRSMNTLIGAGSRISGNVVVPGSVRIEGDVDGDVITTGHVVIGKRARVRGVIRVG
CCCCCHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCEEEECEEEECCCHHHHHHEEEC
SIIVGGMVEGDIVASEAVQVLPSGVILGAVLTRKIVVDEQAFLDGFCYAVADQEGFNKVL
CEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHHH
KAYLGRKSIHTSAFGYNKYSKSG
HHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKIERRSMNTLIGAGSRISGNVVVPGSVRIEGDVDGDVITTGHVVIGKRARVRGVIRVG
CCCCHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCEEEECEEEECCCHHHHHHEEEC
SIIVGGMVEGDIVASEAVQVLPSGVILGAVLTRKIVVDEQAFLDGFCYAVADQEGFNKVL
CEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHHH
KAYLGRKSIHTSAFGYNKYSKSG
HHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA