Click here to switch to the map view.

The map label for this gene is 189025267

Identifier: 189025267

GI number: 189025267

Start: 41074

End: 41685

Strand: Reverse

Name: 189025267

Synonym: TPASS_0033

Alternate gene names: NA

Gene position: 41685-41074 (Counterclockwise)

Preceding gene: 189025268

Following gene: 189025266

Centisome position: 3.66

GC content: 43.46

Gene sequence:

>612_bases
ATGTCCGTTTTTTGTCTACTTCTTTCCTTTGGAAGGCGCTGTGTGGCGGCGGATAATTTCCTTTCTTTCCTTGTGTGGAA
TCTGGTTCTTGCCTTCATCCCCTGGCTCATCTCGGCTATCTTGCACGTGCGCCGCTTCGCTGTCCGCAGTGTACAGCTGT
TCCTTATGCTGCTCTGGCTATTGTTTTTCCCCAACGCTCCGTACATCCTTACCGATATTATCCACTTGGGAAAGGGTAAG
TCATTTTTGCTTTACTATGACCTTATTATTTTACTCGCCTATAGTTTCACTGGTTTGTTCTACGCGTTTGTCAGCCTTCA
CCTTATTGAAAGCATATTAGCCCGTGATTTTCATATCAAAAGGCCATTCATAATTTCAGTATTTGAATTGTATCTCTGTG
CATTCGGTATATATCTGGGGCGTTTCTTGCGCTGGAATTCCTGGGACATTGTCCTACATGGACGCACTATTCTTTCTGAT
ATTGGTATCCGCGTCATCAGGCCAGTGTTCTATGTTGACACCTGGATGTTTGTGTTTTTTTTCGGCACCATGCTCGTTCT
TTACTATCAAAGCTATCGATCATTTCTTACCCACACAAGAAATGACAAATGA

Upstream 100 bases:

>100_bases
CAACCGCTTTGCACATTATGCGTTTTTCTGTACACTCACCGCCATGTACTCTTGCTTAAGGAGGCTTTTTGGCATACGGG
GCACGGGGACTCTGTGTGCC

Downstream 100 bases:

>100_bases
ATATCGTTCTCTTTGAACAGGAAGAGGTAGTGCACGGTTGCGCTGTACTTTCTTTCAGGGATAGTCGATTTTGCCATATC
AAGCGTGTGCTTAAATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSVFCLLLSFGRRCVAADNFLSFLVWNLVLAFIPWLISAILHVRRFAVRSVQLFLMLLWLLFFPNAPYILTDIIHLGKGK
SFLLYYDLIILLAYSFTGLFYAFVSLHLIESILARDFHIKRPFIISVFELYLCAFGIYLGRFLRWNSWDIVLHGRTILSD
IGIRVIRPVFYVDTWMFVFFFGTMLVLYYQSYRSFLTHTRNDK

Sequences:

>Translated_203_residues
MSVFCLLLSFGRRCVAADNFLSFLVWNLVLAFIPWLISAILHVRRFAVRSVQLFLMLLWLLFFPNAPYILTDIIHLGKGK
SFLLYYDLIILLAYSFTGLFYAFVSLHLIESILARDFHIKRPFIISVFELYLCAFGIYLGRFLRWNSWDIVLHGRTILSD
IGIRVIRPVFYVDTWMFVFFFGTMLVLYYQSYRSFLTHTRNDK
>Mature_202_residues
SVFCLLLSFGRRCVAADNFLSFLVWNLVLAFIPWLISAILHVRRFAVRSVQLFLMLLWLLFFPNAPYILTDIIHLGKGKS
FLLYYDLIILLAYSFTGLFYAFVSLHLIESILARDFHIKRPFIISVFELYLCAFGIYLGRFLRWNSWDIVLHGRTILSDI
GIRVIRPVFYVDTWMFVFFFGTMLVLYYQSYRSFLTHTRNDK

Specific function: Unknown

COG id: COG4330

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24059; Mature: 23928

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFCLLLSFGRRCVAADNFLSFLVWNLVLAFIPWLISAILHVRRFAVRSVQLFLMLLWL
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFPNAPYILTDIIHLGKGKSFLLYYDLIILLAYSFTGLFYAFVSLHLIESILARDFHIK
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPFIISVFELYLCAFGIYLGRFLRWNSWDIVLHGRTILSDIGIRVIRPVFYVDTWMFVFF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGTMLVLYYQSYRSFLTHTRNDK
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVFCLLLSFGRRCVAADNFLSFLVWNLVLAFIPWLISAILHVRRFAVRSVQLFLMLLWL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFPNAPYILTDIIHLGKGKSFLLYYDLIILLAYSFTGLFYAFVSLHLIESILARDFHIK
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPFIISVFELYLCAFGIYLGRFLRWNSWDIVLHGRTILSDIGIRVIRPVFYVDTWMFVFF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGTMLVLYYQSYRSFLTHTRNDK
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA