Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025254

Identifier: 189025254

GI number: 189025254

Start: 22043

End: 24166

Strand: Direct

Name: 189025254

Synonym: TPASS_0020

Alternate gene names: NA

Gene position: 22043-24166 (Clockwise)

Preceding gene: 189025253

Following gene: 189025255

Centisome position: 1.93

GC content: 49.39

Gene sequence:

>2124_bases
GTGAGGAAGTGTGCGATGCGAATTATGCGGAGATTAATGTTATTTCTTATGTGTCTATGTGCTGCGCTGTTTGCGCAAGA
GCTGGTTCGCGAACAGAGTGTTACAAAGTCTGCAGATATTACGGTGCTACTTGATACGTCTGGCACTATTTTACCGTACC
GTTCCGTGGTAAGCGGTAGTGTGCTAAAAGATATCGCTACTCGTTTTGTGCGTTTGGGTGATTCGTTCCATATTATTTCG
TTTAGTGCCACGCCACGTCACGAGATTTCTCAGGTTATCCGTAGTGAGTTTGATCTTTCTCAGGTAGTGTCTCGTTTCAT
GATATTGCATCAGTTGGGGTTATATTCTGACTTTTTAACAGCGCTAGATTTCGCGCGTACACACTTACGCGCTTTGCCTG
CAGCACATGAAAAAATTTTGATTGTTGTGTCTGACGGTATTTTTAACCCGCCTGCGCGTAGCGCATATAAAAACTACAAC
AAGGATCAGGTAAAAATTAACCTTGCACGGGCTGCCGCGGATCTGAGACGAGAGCAGGTGCGTGTGTTTTACATAAAACT
TCCCTTTCCCCAGGACATCCAGATCCGCGATTTGGATGACAATCTGCTGACTGACCTACAAAAGACAGATGATGTTCAAA
TCTCTGCAGTCGGTAGCTTTGCAGAAGGACAAACAAGAAGGCCTAAGTTGGACACTGTGGGTGTGGTTTCCGATCAAACG
GGCGGCGTTGCAGATAACCATGCAGTTGCTACGCACGGAAGGGAGGACGGGACAGTCCAAGGGGTTGTTGGCAGCCATGT
GGAGGTGGCACGCACACAGGACAGACGCAGTAATGCAGATCCTGCTAAAAGGGAAGGGGTTCGGCCTTCCTCAGAAGCAA
CTGATGTTTCCCGCGAGTTCACGGAGGATTTGGGAATCAGGGTGAGTCCGGTTGATTCAGATGGTTCTGTGCGTTTTTCC
GAGAAGGAGCGCACGCTTCCCGTGTTACACTTTCCAAGGGTCCTTGAGGTACAGGGTAAGTATGCAGAATGTATGTTCGA
GGTTGAAAATAGCACGGATGCTCCCGTTTTGTTGCATTTGGAGCGGGTGATTTTTGACAATGGCGTTGAGACTGACATAG
TTTCGGTGCAAACAGAGTCTTGTGCAGTAGCGTCCGGTGCACGCGCGATGTTGCGAACAACTTTTTTATTACCTAAGCGC
TACCACGAAGAGGGAACGTACCAGGTGACCATGCGTGTACAGTTTGCAGATAACGTCCGCGTGTTCCCTCAGGTGGCAAC
AGCAGAGCTGCGCGTTTCTCCTTTGCCTTTTCTTGGATTGGTGCGGAGAGGTATACATGGGGTTCTGTCTTCTGTAGGGC
TTACGCATGCGTTTGGATATGTGTTGGACATGGTAGGGTTGAGTCGCACGGGTTTCGGTGCGGTGCTTTTGCCTCTGTTT
GCTTTGGCTATCTTCTTAGTACTTGTATCAGCCGTGGTGTGTAGGTCAAAGCGCGTGTTGTCTCGTAAGTCATGGCGCGG
AAGTCCCCGTACAGAGAATGGGTGTCAGGGTCCTGGTTCGATGTCTGATTTTCGGGCGCATTCTGTTAAGGAACAAAGGC
AGGATCAGGAGCGCGTGTATGCAGGCATGGAGAGAATTGTATCTCAGCGTAAAAGCGATGTGCAGGATCGCCTCAGTGTA
TTGAATGCGGCAACTGCATTTGGGCGTGATCGAGTTTCATTTTCCCCCAGGGTAACGCGTGCGGAGCATGGATGTAGTCG
GTCAGGAATGACTGAAATTTTTGTGTTTGATCAAACACGTGCGATTGGCAAGCGCAATATTCACGTAATGAAAGCAGGAA
CCCGTTTAGGGGTTGGCGGGCACAAGGGGGATGACTTCCTAATTTTTTTGGTGCCGTTTCCAAGGCGGCTAGCACAAGTG
TATTTTGACGGTGAAGTATATCATCTTGCTATCTTGAAGCCGAGGTACTTCCCGTACGAGGAGTCGAGTGTGGTGCACGA
CTGCGTCGGCAGAGTGGTTACCCTTGTCTCTGACAGGGGGTATCATGTGCCCTTCACATTCCGCCAGTATGAGGATCCCG
CTGTGAGATTGAACAATCTGCTCACCTCTATCGAATACGCTTGA

Upstream 100 bases:

>100_bases
GCAATCTGCTCAATCGTAAGACAGGGGAACAACTTGCCTTTACGGTGGGAGAACATGAAAAGGTGTATGAGATCTTAAGC
ATCTCTGCTGCAGAGATCTA

Downstream 100 bases:

>100_bases
TCAAAGCGATAAAGGAACGAGTCGAGAGGTGGATTCGGGACTCGATTGAGCAGATGGAAAGGGGGAAAGATGAAAACCGG
GGCGGATCGCGCACCGAAGC

Product: protein 76K

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 707; Mature: 707

Protein sequence:

>707_residues
MRKCAMRIMRRLMLFLMCLCAALFAQELVREQSVTKSADITVLLDTSGTILPYRSVVSGSVLKDIATRFVRLGDSFHIIS
FSATPRHEISQVIRSEFDLSQVVSRFMILHQLGLYSDFLTALDFARTHLRALPAAHEKILIVVSDGIFNPPARSAYKNYN
KDQVKINLARAAADLRREQVRVFYIKLPFPQDIQIRDLDDNLLTDLQKTDDVQISAVGSFAEGQTRRPKLDTVGVVSDQT
GGVADNHAVATHGREDGTVQGVVGSHVEVARTQDRRSNADPAKREGVRPSSEATDVSREFTEDLGIRVSPVDSDGSVRFS
EKERTLPVLHFPRVLEVQGKYAECMFEVENSTDAPVLLHLERVIFDNGVETDIVSVQTESCAVASGARAMLRTTFLLPKR
YHEEGTYQVTMRVQFADNVRVFPQVATAELRVSPLPFLGLVRRGIHGVLSSVGLTHAFGYVLDMVGLSRTGFGAVLLPLF
ALAIFLVLVSAVVCRSKRVLSRKSWRGSPRTENGCQGPGSMSDFRAHSVKEQRQDQERVYAGMERIVSQRKSDVQDRLSV
LNAATAFGRDRVSFSPRVTRAEHGCSRSGMTEIFVFDQTRAIGKRNIHVMKAGTRLGVGGHKGDDFLIFLVPFPRRLAQV
YFDGEVYHLAILKPRYFPYEESSVVHDCVGRVVTLVSDRGYHVPFTFRQYEDPAVRLNNLLTSIEYA

Sequences:

>Translated_707_residues
MRKCAMRIMRRLMLFLMCLCAALFAQELVREQSVTKSADITVLLDTSGTILPYRSVVSGSVLKDIATRFVRLGDSFHIIS
FSATPRHEISQVIRSEFDLSQVVSRFMILHQLGLYSDFLTALDFARTHLRALPAAHEKILIVVSDGIFNPPARSAYKNYN
KDQVKINLARAAADLRREQVRVFYIKLPFPQDIQIRDLDDNLLTDLQKTDDVQISAVGSFAEGQTRRPKLDTVGVVSDQT
GGVADNHAVATHGREDGTVQGVVGSHVEVARTQDRRSNADPAKREGVRPSSEATDVSREFTEDLGIRVSPVDSDGSVRFS
EKERTLPVLHFPRVLEVQGKYAECMFEVENSTDAPVLLHLERVIFDNGVETDIVSVQTESCAVASGARAMLRTTFLLPKR
YHEEGTYQVTMRVQFADNVRVFPQVATAELRVSPLPFLGLVRRGIHGVLSSVGLTHAFGYVLDMVGLSRTGFGAVLLPLF
ALAIFLVLVSAVVCRSKRVLSRKSWRGSPRTENGCQGPGSMSDFRAHSVKEQRQDQERVYAGMERIVSQRKSDVQDRLSV
LNAATAFGRDRVSFSPRVTRAEHGCSRSGMTEIFVFDQTRAIGKRNIHVMKAGTRLGVGGHKGDDFLIFLVPFPRRLAQV
YFDGEVYHLAILKPRYFPYEESSVVHDCVGRVVTLVSDRGYHVPFTFRQYEDPAVRLNNLLTSIEYA
>Mature_707_residues
MRKCAMRIMRRLMLFLMCLCAALFAQELVREQSVTKSADITVLLDTSGTILPYRSVVSGSVLKDIATRFVRLGDSFHIIS
FSATPRHEISQVIRSEFDLSQVVSRFMILHQLGLYSDFLTALDFARTHLRALPAAHEKILIVVSDGIFNPPARSAYKNYN
KDQVKINLARAAADLRREQVRVFYIKLPFPQDIQIRDLDDNLLTDLQKTDDVQISAVGSFAEGQTRRPKLDTVGVVSDQT
GGVADNHAVATHGREDGTVQGVVGSHVEVARTQDRRSNADPAKREGVRPSSEATDVSREFTEDLGIRVSPVDSDGSVRFS
EKERTLPVLHFPRVLEVQGKYAECMFEVENSTDAPVLLHLERVIFDNGVETDIVSVQTESCAVASGARAMLRTTFLLPKR
YHEEGTYQVTMRVQFADNVRVFPQVATAELRVSPLPFLGLVRRGIHGVLSSVGLTHAFGYVLDMVGLSRTGFGAVLLPLF
ALAIFLVLVSAVVCRSKRVLSRKSWRGSPRTENGCQGPGSMSDFRAHSVKEQRQDQERVYAGMERIVSQRKSDVQDRLSV
LNAATAFGRDRVSFSPRVTRAEHGCSRSGMTEIFVFDQTRAIGKRNIHVMKAGTRLGVGGHKGDDFLIFLVPFPRRLAQV
YFDGEVYHLAILKPRYFPYEESSVVHDCVGRVVTLVSDRGYHVPFTFRQYEDPAVRLNNLLTSIEYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78969; Mature: 78969

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKCAMRIMRRLMLFLMCLCAALFAQELVREQSVTKSADITVLLDTSGTILPYRSVVSGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECHHHHHHH
VLKDIATRFVRLGDSFHIISFSATPRHEISQVIRSEFDLSQVVSRFMILHQLGLYSDFLT
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALDFARTHLRALPAAHEKILIVVSDGIFNPPARSAYKNYNKDQVKINLARAAADLRREQV
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHCCE
RVFYIKLPFPQDIQIRDLDDNLLTDLQKTDDVQISAVGSFAEGQTRRPKLDTVGVVSDQT
EEEEEECCCCCCCEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCC
GGVADNHAVATHGREDGTVQGVVGSHVEVARTQDRRSNADPAKREGVRPSSEATDVSREF
CCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHH
TEDLGIRVSPVDSDGSVRFSEKERTLPVLHFPRVLEVQGKYAECMFEVENSTDAPVLLHL
HHHCCCEEEECCCCCCEEECCCCCCCCEEECCCCEEECCCCEEEEEEECCCCCCCHHEEE
ERVIFDNGVETDIVSVQTESCAVASGARAMLRTTFLLPKRYHEEGTYQVTMRVQFADNVR
HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEEECCCCE
VFPQVATAELRVSPLPFLGLVRRGIHGVLSSVGLTHAFGYVLDMVGLSRTGFGAVLLPLF
ECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALAIFLVLVSAVVCRSKRVLSRKSWRGSPRTENGCQGPGSMSDFRAHSVKEQRQDQERVY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGMERIVSQRKSDVQDRLSVLNAATAFGRDRVSFSPRVTRAEHGCSRSGMTEIFVFDQTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECHH
AIGKRNIHVMKAGTRLGVGGHKGDDFLIFLVPFPRRLAQVYFDGEVYHLAILKPRYFPYE
HCCCCCEEEEECCCEECCCCCCCCCEEEEEECCCHHHHHEEECCCEEEEEEECCCCCCCC
ESSVVHDCVGRVVTLVSDRGYHVPFTFRQYEDPAVRLNNLLTSIEYA
CCHHHHHHHHHHHHHHCCCCEECCEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKCAMRIMRRLMLFLMCLCAALFAQELVREQSVTKSADITVLLDTSGTILPYRSVVSGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECHHHHHHH
VLKDIATRFVRLGDSFHIISFSATPRHEISQVIRSEFDLSQVVSRFMILHQLGLYSDFLT
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALDFARTHLRALPAAHEKILIVVSDGIFNPPARSAYKNYNKDQVKINLARAAADLRREQV
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHCCE
RVFYIKLPFPQDIQIRDLDDNLLTDLQKTDDVQISAVGSFAEGQTRRPKLDTVGVVSDQT
EEEEEECCCCCCCEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCC
GGVADNHAVATHGREDGTVQGVVGSHVEVARTQDRRSNADPAKREGVRPSSEATDVSREF
CCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHH
TEDLGIRVSPVDSDGSVRFSEKERTLPVLHFPRVLEVQGKYAECMFEVENSTDAPVLLHL
HHHCCCEEEECCCCCCEEECCCCCCCCEEECCCCEEECCCCEEEEEEECCCCCCCHHEEE
ERVIFDNGVETDIVSVQTESCAVASGARAMLRTTFLLPKRYHEEGTYQVTMRVQFADNVR
HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEEECCCCE
VFPQVATAELRVSPLPFLGLVRRGIHGVLSSVGLTHAFGYVLDMVGLSRTGFGAVLLPLF
ECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALAIFLVLVSAVVCRSKRVLSRKSWRGSPRTENGCQGPGSMSDFRAHSVKEQRQDQERVY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGMERIVSQRKSDVQDRLSVLNAATAFGRDRVSFSPRVTRAEHGCSRSGMTEIFVFDQTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECHH
AIGKRNIHVMKAGTRLGVGGHKGDDFLIFLVPFPRRLAQVYFDGEVYHLAILKPRYFPYE
HCCCCCEEEEECCCEECCCCCCCCCEEEEEECCCHHHHHEEECCCEEEEEEECCCCCCCC
ESSVVHDCVGRVVTLVSDRGYHVPFTFRQYEDPAVRLNNLLTSIEYA
CCHHHHHHHHHHHHHHCCCCEECCEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA