| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189025242
Identifier: 189025242
GI number: 189025242
Start: 7014
End: 7967
Strand: Direct
Name: 189025242
Synonym: TPASS_0006
Alternate gene names: NA
Gene position: 7014-7967 (Clockwise)
Preceding gene: 189025241
Following gene: 189025243
Centisome position: 0.62
GC content: 49.79
Gene sequence:
>954_bases ATGGGGACTCGTGTCAGATTTTCCTTCTGCGGTATTGCAGGTGTATGTTTACTCGCACTAGGTTTTTTAGTTAGTTGTTC TTTGCAATCTTCACGAAGCGCTACAAAGAAATCTGAGGCGCGGAGGACTTCTTATCGGATCGGTCTCATGACAAGTACGG GATCTCAGTCTGTAGATGATGTCCTTGCGAAGACACGCCTCGTCAGTATCTACGGAGAGGCTCGTGGGGAAACGGGTGGA AGGATTGTCCATGTTACTTACTCCGATAACTTCTCCCACGACCATGAAGCAACCGTTTCTAAGTTGCTTGCACTCGCTGA GGATTCGACTATAAAGGCCATTGTGGTTAGTCAGGCAGTTCCCGGCGTTTCAAAGGCGTTTGGGATCATTAAGTCTAAAC GTCCTGATGTTTTGCTTTTTGCGGGAGAACCACTTGAGCCGGTAGAGATGCTGCAGGAGTCTGCAGACATCGTGGTCAGT CAGGACTACTTGTTCGGTGGATATGCCGTTCCGTGGGTTGCGGAAAGGATGGGGGCGCGCACATTGGTGCATGTCTCTTT TCCCCGGCATATGTCCTACCCCGGTTTGAGGGTTAGGCGTACGGTGATGAGGGCAGCATGTACCGATTTGGGACTTTCCT TCGCACACGAGGAAGCGCCTGATCCTGTAGACGGTGTCAGTGACGGAGAACTTGAGGATTTTTTCCACAAGACGATTGTG AAGTGGATCAAAAAATATGGCAAGGAAACCCTGTTCTACTGCACCAATGACGCTCACAACAGGCCGCTCATCAGTGCCTT GTTGAAATATGGCGGTATGCTAATTGGTGCAACCATCTTCGATTACGCTGATGCGCTCGGGGTGCATTATGCTGAGCTTG AAGACGTGTATAAAATACGAGAGAAGGTTGAGAAGTCATTGGTTGCTTCGGCGCAGAGGGGCGCTTTGGATTAA
Upstream 100 bases:
>100_bases TTTCACGTGAAACGTGTGGGATGAGGAGTGGGATCAAATCTACCCTAATTCTGGAGGATTATTTGGGTTCACGTTCATGT AAACTTTATGGGGGTTGTGT
Downstream 100 bases:
>100_bases ATTTAAATGCACAGGCATTTACGGTGACCATGGGTTTTGTGGAGTATGCGCGCAAAATCATAGATGGCGAACCGCGTAAA GATGATATGCGTGAAGCTCT
Product: protein Tp75
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MGTRVRFSFCGIAGVCLLALGFLVSCSLQSSRSATKKSEARRTSYRIGLMTSTGSQSVDDVLAKTRLVSIYGEARGETGG RIVHVTYSDNFSHDHEATVSKLLALAEDSTIKAIVVSQAVPGVSKAFGIIKSKRPDVLLFAGEPLEPVEMLQESADIVVS QDYLFGGYAVPWVAERMGARTLVHVSFPRHMSYPGLRVRRTVMRAACTDLGLSFAHEEAPDPVDGVSDGELEDFFHKTIV KWIKKYGKETLFYCTNDAHNRPLISALLKYGGMLIGATIFDYADALGVHYAELEDVYKIREKVEKSLVASAQRGALD
Sequences:
>Translated_317_residues MGTRVRFSFCGIAGVCLLALGFLVSCSLQSSRSATKKSEARRTSYRIGLMTSTGSQSVDDVLAKTRLVSIYGEARGETGG RIVHVTYSDNFSHDHEATVSKLLALAEDSTIKAIVVSQAVPGVSKAFGIIKSKRPDVLLFAGEPLEPVEMLQESADIVVS QDYLFGGYAVPWVAERMGARTLVHVSFPRHMSYPGLRVRRTVMRAACTDLGLSFAHEEAPDPVDGVSDGELEDFFHKTIV KWIKKYGKETLFYCTNDAHNRPLISALLKYGGMLIGATIFDYADALGVHYAELEDVYKIREKVEKSLVASAQRGALD >Mature_316_residues GTRVRFSFCGIAGVCLLALGFLVSCSLQSSRSATKKSEARRTSYRIGLMTSTGSQSVDDVLAKTRLVSIYGEARGETGGR IVHVTYSDNFSHDHEATVSKLLALAEDSTIKAIVVSQAVPGVSKAFGIIKSKRPDVLLFAGEPLEPVEMLQESADIVVSQ DYLFGGYAVPWVAERMGARTLVHVSFPRHMSYPGLRVRRTVMRAACTDLGLSFAHEEAPDPVDGVSDGELEDFFHKTIVK WIKKYGKETLFYCTNDAHNRPLISALLKYGGMLIGATIFDYADALGVHYAELEDVYKIREKVEKSLVASAQRGALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34679; Mature: 34548
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRVRFSFCGIAGVCLLALGFLVSCSLQSSRSATKKSEARRTSYRIGLMTSTGSQSVDD CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHH VLAKTRLVSIYGEARGETGGRIVHVTYSDNFSHDHEATVSKLLALAEDSTIKAIVVSQAV HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHCC PGVSKAFGIIKSKRPDVLLFAGEPLEPVEMLQESADIVVSQDYLFGGYAVPWVAERMGAR CCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCEEEECCEEECCCHHHHHHHHCCCE TLVHVSFPRHMSYPGLRVRRTVMRAACTDLGLSFAHEEAPDPVDGVSDGELEDFFHKTIV EEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH KWIKKYGKETLFYCTNDAHNRPLISALLKYGGMLIGATIFDYADALGVHYAELEDVYKIR HHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCEEHHHHHHHHHHHHCCHHHHHHHHHHHH EKVEKSLVASAQRGALD HHHHHHHHHHHHCCCCC >Mature Secondary Structure GTRVRFSFCGIAGVCLLALGFLVSCSLQSSRSATKKSEARRTSYRIGLMTSTGSQSVDD CCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHH VLAKTRLVSIYGEARGETGGRIVHVTYSDNFSHDHEATVSKLLALAEDSTIKAIVVSQAV HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHCC PGVSKAFGIIKSKRPDVLLFAGEPLEPVEMLQESADIVVSQDYLFGGYAVPWVAERMGAR CCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCEEEECCEEECCCHHHHHHHHCCCE TLVHVSFPRHMSYPGLRVRRTVMRAACTDLGLSFAHEEAPDPVDGVSDGELEDFFHKTIV EEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH KWIKKYGKETLFYCTNDAHNRPLISALLKYGGMLIGATIFDYADALGVHYAELEDVYKIR HHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCEEHHHHHHHHHHHHCCHHHHHHHHHHHH EKVEKSLVASAQRGALD HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]