| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is mnmG
Identifier: 188587518
GI number: 188587518
Start: 3159517
End: 3161451
Strand: Reverse
Name: mnmG
Synonym: Nther_2929
Alternate gene names: 188587518
Gene position: 3161451-3159517 (Counterclockwise)
Preceding gene: 188587519
Following gene: 188587517
Centisome position: 99.87
GC content: 35.87
Gene sequence:
>1935_bases ATGGCCTATTATGGTGGCAATTATGATTTAATTGTAGTGGGCGCAGGACATGCTGGCTGTGAAGCCGCTTTAGCTGGTGC TAGAATTGGGGCTAAAACTTTGTTATTGACTTTAAATTTAGACCAAATAGCTCTAATGCCATGTAATCCTGCTATTGGAG GTCCGGCAAAAAGTCACATTGTCAGAGAAGTTGATGCTTTAGGGGGAGAAATGGGCAAAAATATAGATGATACTGCTATT CAATTTAGGATGTTAAATACCCGCAAAGGTCCAGCTGTTCAGGCTTTGAGGGCTCAAGCTGATAAAATTAAATATCAAGA ACGAATGAAATACATTTTAGAAAATGAAGAAAATCTCCTTCTCAAACAAGAAACAGTTAATCAGTTAATGATAGAAGACA ATCAAATTAAAGGTGTCGTTACTAAAGATGGCACTTATTATTATTGTGAACAACTCGTGATTACCTCAGGAACTTATTTA AAGGGAAGAATTATAGTAGGGGATGTAGACTACTCTGGAGGTCCTAATGGCCAGCAAGCTGCCTATGGTTTATCAGAGGA CTTTAAACAGCACGGAATTTCTTTAATGAGATTTAAAACAGGGACTCCTGCTAGAGTGTATAGAAAAAGTTTGAATTTCG ATGAAATGGAGATTCAGCATGGGGATGATTATCCCTGGAGATTTTCTTTTTATCATAGTTCTGAAAGACTGAAACAATTG CCATGTTATTTAACTTTCACTAATTATGAAACCCATAAAATAATTAATGATAGTTTAAGTAGATCTCCTCTTTATTCTGG AAGAATAGAAGGTACCGGTCCAAGATATTGCCCCTCTATTGAAGATAAAATTGTTAGATTTCCTGACAAATCACGACATC AACTATTTTTAGAACCTGAAGGATTAAATACTCAGGAATACTATGTTCAGGGAATGTCAACAAGCTTACCATTAGATGTT CAGGAAAGGATGCTCAGAACTATACCTGGTTTAGAAGAAGTTGAAATAATGAGACCTGGATATGCTATAGAATATGATTG TATTGACCCAACCCAGTTAGAATTAACTCTAGAACACAAACAAATATCTGGATTGTTTTTTGCTGGTCAAATCAACGGTA CTAGTGGGTATGAGGAAGCTGCTGGTCAAGGAATTTTAGCAGGAATAAATGCAGCTCAAAAAATTCAAGGTAAAGAGCCT GTTATTATCAAACGTAGTCAAGGTTATATAGGAGTATTAATTGATGATCTTGTTACAAAAGGGACTCAAGAGCCATATAG GATGTTAACTTCCCGCGCCGAATATCGTTTGATACTGAGACAAGATAATGCAGATTTAAGGCTAACCGAACTTGGTTATC AAGTAGGGCTTATTAAAGAAGGCAATTATCAAAAATTCAAAGAGAAACTAGAGAAGATAGAAAGCGAAAAAGAGAGGCTT AAATCAATTAAGTTAACACCTAATAAAAATGTACAAAACTTTATGGAAGAACACAATACCTCTGGGTTAAAAAAACCTAC AACCTTATTTCACATCTTAAAAAGGCCAGAAATTTCATATGAAGCACTGGAGTATTTCGATGAAACAAGACCTGATTTAC CTTTAGAAGTTACAGAACAAATTGAAATACAAATTAAGTATGAGGGATATATCGATAAACAAGTGGAACAGGTGCAAAGG TTTGAAAAGTTGGAAGCTCGTTTAATTCCTGATGATATTGATTATAGTCAAATTTCAGGTTTGTCAATAGAAGCAAGGGA AAAATTGCAAACGTACAGACCCAGATCCGTAGGGCAAGCAAATCGGATTTCTGGAATAGACCCTTCAGATATTTCTGTGT TGATGGTTTATCTTGAACAACTGAAACAGCGTGCGGACAGGAATCAGGCCAGTCATGATGATTCAAATACAGAGACAGGT GAAAATGATGACTAA
Upstream 100 bases:
>100_bases GCTTATGATTACTTAGGTGAAATCACAGGTGAAACTGCTTCAGAAGAACTTGTAGATCGAATTTTTAATGATTTTTGTAT TGGAAAGTGAGGTTGTTAAT
Downstream 100 bases:
>100_bases TTTATCTAACTTATCTGACAAGATTAAGCAGTGGGGAGAAACAGCTCCAAAGGAAATAGATGAAAGTTTTATTGTATATA AAGAAGAGTTACTGGACTGG
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MAYYGGNYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHIVREVDALGGEMGKNIDDTAI QFRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLLLKQETVNQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYL KGRIIVGDVDYSGGPNGQQAAYGLSEDFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQL PCYLTFTNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPEGLNTQEYYVQGMSTSLPLDV QERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHKQISGLFFAGQINGTSGYEEAAGQGILAGINAAQKIQGKEP VIIKRSQGYIGVLIDDLVTKGTQEPYRMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERL KSIKLTPNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQIEIQIKYEGYIDKQVEQVQR FEKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQANRISGIDPSDISVLMVYLEQLKQRADRNQASHDDSNTETG ENDD
Sequences:
>Translated_644_residues MAYYGGNYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHIVREVDALGGEMGKNIDDTAI QFRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLLLKQETVNQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYL KGRIIVGDVDYSGGPNGQQAAYGLSEDFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQL PCYLTFTNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPEGLNTQEYYVQGMSTSLPLDV QERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHKQISGLFFAGQINGTSGYEEAAGQGILAGINAAQKIQGKEP VIIKRSQGYIGVLIDDLVTKGTQEPYRMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERL KSIKLTPNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQIEIQIKYEGYIDKQVEQVQR FEKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQANRISGIDPSDISVLMVYLEQLKQRADRNQASHDDSNTETG ENDD >Mature_643_residues AYYGGNYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHIVREVDALGGEMGKNIDDTAIQ FRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLLLKQETVNQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYLK GRIIVGDVDYSGGPNGQQAAYGLSEDFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQLP CYLTFTNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPEGLNTQEYYVQGMSTSLPLDVQ ERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHKQISGLFFAGQINGTSGYEEAAGQGILAGINAAQKIQGKEPV IIKRSQGYIGVLIDDLVTKGTQEPYRMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERLK SIKLTPNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQIEIQIKYEGYIDKQVEQVQRF EKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQANRISGIDPSDISVLMVYLEQLKQRADRNQASHDDSNTETGE NDD
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=652, Percent_Identity=39.8773006134969, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI19882217, Length=677, Percent_Identity=38.4047267355982, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI183227703, Length=692, Percent_Identity=37.5722543352601, Blast_Score=442, Evalue=1e-124, Organism=Escherichia coli, GI2367273, Length=620, Percent_Identity=50.6451612903226, Blast_Score=639, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=617, Percent_Identity=41.4910858995138, Blast_Score=468, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6321202, Length=614, Percent_Identity=43.6482084690554, Blast_Score=486, Evalue=1e-138, Organism=Drosophila melanogaster, GI24658174, Length=635, Percent_Identity=41.7322834645669, Blast_Score=441, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_NATTJ (B2A469)
Other databases:
- EMBL: CP001034 - RefSeq: YP_001919063.1 - ProteinModelPortal: B2A469 - SMR: B2A469 - GeneID: 6317165 - GenomeReviews: CP001034_GR - KEGG: nth:Nther_2929 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 73031; Mature: 72900
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYGGNYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHI CCEECCCEEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHH VREVDALGGEMGKNIDDTAIQFRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLL HHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LKQETVNQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYLKGRIIVGDVDYSGGPNGQQA EEHHHHHHHEECCCCEEEEEECCCCEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCHH AYGLSEDFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQL HCCCHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCHHHHHHC PCYLTFTNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPE CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCC GLNTQEYYVQGMSTSLPLDVQERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHK CCCHHHHHEECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCEEEEEEECE QISGLFFAGQINGTSGYEEAAGQGILAGINAAQKIQGKEPVIIKRSQGYIGVLIDDLVTK EECEEEEEEEECCCCCHHHHCCCCEEECCCHHHHCCCCCCEEEEECCCEEEEEHHHHHHC GTQEPYRMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERL CCCHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHH KSIKLTPNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQ HEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECE IEIQIKYEGYIDKQVEQVQRFEKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQA EEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC NRISGIDPSDISVLMVYLEQLKQRADRNQASHDDSNTETGENDD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYYGGNYDLIVVGAGHAGCEAALAGARIGAKTLLLTLNLDQIALMPCNPAIGGPAKSHI CEECCCEEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHH VREVDALGGEMGKNIDDTAIQFRMLNTRKGPAVQALRAQADKIKYQERMKYILENEENLL HHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LKQETVNQLMIEDNQIKGVVTKDGTYYYCEQLVITSGTYLKGRIIVGDVDYSGGPNGQQA EEHHHHHHHEECCCCEEEEEECCCCEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCHH AYGLSEDFKQHGISLMRFKTGTPARVYRKSLNFDEMEIQHGDDYPWRFSFYHSSERLKQL HCCCHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCHHHHHHC PCYLTFTNYETHKIINDSLSRSPLYSGRIEGTGPRYCPSIEDKIVRFPDKSRHQLFLEPE CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCC GLNTQEYYVQGMSTSLPLDVQERMLRTIPGLEEVEIMRPGYAIEYDCIDPTQLELTLEHK CCCHHHHHEECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCEEEEEEECE QISGLFFAGQINGTSGYEEAAGQGILAGINAAQKIQGKEPVIIKRSQGYIGVLIDDLVTK EECEEEEEEEECCCCCHHHHCCCCEEECCCHHHHCCCCCCEEEEECCCEEEEEHHHHHHC GTQEPYRMLTSRAEYRLILRQDNADLRLTELGYQVGLIKEGNYQKFKEKLEKIESEKERL CCCHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHH KSIKLTPNKNVQNFMEEHNTSGLKKPTTLFHILKRPEISYEALEYFDETRPDLPLEVTEQ HEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECE IEIQIKYEGYIDKQVEQVQRFEKLEARLIPDDIDYSQISGLSIEAREKLQTYRPRSVGQA EEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC NRISGIDPSDISVLMVYLEQLKQRADRNQASHDDSNTETGENDD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA