| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is yyaC [H]
Identifier: 188587511
GI number: 188587511
Start: 3153862
End: 3154461
Strand: Direct
Name: yyaC [H]
Synonym: Nther_2922
Alternate gene names: 188587511
Gene position: 3153862-3154461 (Clockwise)
Preceding gene: 188587496
Following gene: NA
Centisome position: 99.63
GC content: 36.33
Gene sequence:
>600_bases ATGCCTAACTCCCCTGATGATATGAATTCTAAAATATCTGGGAAGTCGTTACGAAAATCACACTTAATTAGTAAATCTTT GTTTAATATTTTGAAAAAAGACCAACCTCAACCCAAAGACATAACGGTTGTCTGTATCGGTACAGATAGGTCCACAGGTG ATTCTCTTGGTCCATTGATCGGAAGCCGTCTAAATAAAATCACAACTAGTGATATTACAATTAAAGGAACTCTAGAATCT CCAGTTCATGCCACAAATATAACAGAAACTTTATTGGATTTAAATAAAGAGCTGAAAAGTCCTTATATTATAGCTGTAGA TGCTTGTTTAGGTAAACCAGGTAATGTTGGCAAAGTGATTGTTAAGGAAGGACCAGTGAAGCCAGGTGCAGGCGTAAAAA AAGACCTTGAGCCTGTAGGTAATTGTCACGTTTCAGGAATCGTTAATGTTGGGGGCTTCATGGAGTACATGGTTCTTCAA AACACCAGATTATATGAAGTCACCAATTTATCAGTGATTATTAGCAGAGGAATCTCATGGGCAACAAATCATTATATAAA AAAGGTACAGACAGAGTCTGTACCTAAGGTTAAAAATTGA
Upstream 100 bases:
>100_bases AATTCTTCTCCAAATTTGATTTTCCTGTTTTTTATAAGTATAGCTTCTTGAAAAAAGGGAATAATAATACAGCAGAGTAT TTACGAAAGGAGCTTGTACC
Downstream 100 bases:
>100_bases TCATTAGTTAAACTATTGTTGCTGCTGTTTTGTTTGCTCCTTTTTTTGCTTCATCTCACAATTACCATCAAAGAGCGCCC CATCATCTATAAATAAGTTA
Product: sporulation protein YyaC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPNSPDDMNSKISGKSLRKSHLISKSLFNILKKDQPQPKDITVVCIGTDRSTGDSLGPLIGSRLNKITTSDITIKGTLES PVHATNITETLLDLNKELKSPYIIAVDACLGKPGNVGKVIVKEGPVKPGAGVKKDLEPVGNCHVSGIVNVGGFMEYMVLQ NTRLYEVTNLSVIISRGISWATNHYIKKVQTESVPKVKN
Sequences:
>Translated_199_residues MPNSPDDMNSKISGKSLRKSHLISKSLFNILKKDQPQPKDITVVCIGTDRSTGDSLGPLIGSRLNKITTSDITIKGTLES PVHATNITETLLDLNKELKSPYIIAVDACLGKPGNVGKVIVKEGPVKPGAGVKKDLEPVGNCHVSGIVNVGGFMEYMVLQ NTRLYEVTNLSVIISRGISWATNHYIKKVQTESVPKVKN >Mature_198_residues PNSPDDMNSKISGKSLRKSHLISKSLFNILKKDQPQPKDITVVCIGTDRSTGDSLGPLIGSRLNKITTSDITIKGTLESP VHATNITETLLDLNKELKSPYIIAVDACLGKPGNVGKVIVKEGPVKPGAGVKKDLEPVGNCHVSGIVNVGGFMEYMVLQN TRLYEVTNLSVIISRGISWATNHYIKKVQTESVPKVKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009665 - InterPro: IPR000671 [H]
Pfam domain/function: PF06866 DUF1256 [H]
EC number: NA
Molecular weight: Translated: 21504; Mature: 21373
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSPDDMNSKISGKSLRKSHLISKSLFNILKKDQPQPKDITVVCIGTDRSTGDSLGPLI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHH GSRLNKITTSDITIKGTLESPVHATNITETLLDLNKELKSPYIIAVDACLGKPGNVGKVI HHHHHCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEE VKEGPVKPGAGVKKDLEPVGNCHVSGIVNVGGFMEYMVLQNTRLYEVTNLSVIISRGISW EECCCCCCCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHCCCEEEEECCCEEEEECCCCH ATNHYIKKVQTESVPKVKN HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PNSPDDMNSKISGKSLRKSHLISKSLFNILKKDQPQPKDITVVCIGTDRSTGDSLGPLI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHH GSRLNKITTSDITIKGTLESPVHATNITETLLDLNKELKSPYIIAVDACLGKPGNVGKVI HHHHHCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEE VKEGPVKPGAGVKKDLEPVGNCHVSGIVNVGGFMEYMVLQNTRLYEVTNLSVIISRGISW EECCCCCCCCCCCHHHHHCCCEEEEEEECHHHHHHHHHHCCCEEEEECCCEEEEECCCCH ATNHYIKKVQTESVPKVKN HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377 [H]