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The map label for this gene is 188587510

Identifier: 188587510

GI number: 188587510

Start: 3153168

End: 3153740

Strand: Reverse

Name: 188587510

Synonym: Nther_2921

Alternate gene names: NA

Gene position: 3153740-3153168 (Counterclockwise)

Preceding gene: 188587512

Following gene: 188587509

Centisome position: 99.63

GC content: 34.55

Gene sequence:

>573_bases
ATGGATATAGAGGAGATTAAAAAGAAATATCAGGAGACAATGCAGTATATTGAAGATAAAGAGTTTTCCAATGCAGAGAA
AGAACTGGAAAACATAATAGAAACTAAACCAGATTTTGCTCCAGCGTATAATAAGTTGGGTGTAGTGAAAGCTCGACAGG
GTGAATTGGATTCTGCATTAGAATGTTTTAATAAAGCAGCAGAATTGTGGCCAGAATTTTCTGCTCCCTATAGTAATGTT
GGGAATGTTTACATGGAAAAAGGCGATGATATAACTGCTGAAAAATACTATAAACATGCATTATCTATAAACGAACAAAA
TCGAATCCCTTATAATAACTTAGCTAGAATTTATAAAAAAAGGCGACAGATTGGGAAATTTATTAAGTATCAAAAACTTT
CCCATAAACATAGTGGACTTGATGGTGATCACGAGGTGTTTAAGCACTACTTTAATGAAGATGTACCAGAGTCATTAAAA
AAAGGGGGAGTCACAGGTTGCTTCACAATGGGCGGAATACTTGGAATAATTATGGTTACAGCTCTGATACTAATAGGAGT
TCTAACAAGCTAG

Upstream 100 bases:

>100_bases
TACTCTGCTGTATTATTATTCCCTTTTTTCAAGAAGCTATACTTATAAAAAACAGGAAAATCAAATTTGGAGAAGAATTT
ATATTTGAGGGGGGATATCA

Downstream 100 bases:

>100_bases
CTAAATCTAAAGAAGCAAACTCTAAGAAAAAATATTTTTTAATTTTGTTACTGGCTTTCCTGATATCAGGGATATATTTA
ATAGCGGCAAGATTTCCTTA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDIEEIKKKYQETMQYIEDKEFSNAEKELENIIETKPDFAPAYNKLGVVKARQGELDSALECFNKAAELWPEFSAPYSNV
GNVYMEKGDDITAEKYYKHALSINEQNRIPYNNLARIYKKRRQIGKFIKYQKLSHKHSGLDGDHEVFKHYFNEDVPESLK
KGGVTGCFTMGGILGIIMVTALILIGVLTS

Sequences:

>Translated_190_residues
MDIEEIKKKYQETMQYIEDKEFSNAEKELENIIETKPDFAPAYNKLGVVKARQGELDSALECFNKAAELWPEFSAPYSNV
GNVYMEKGDDITAEKYYKHALSINEQNRIPYNNLARIYKKRRQIGKFIKYQKLSHKHSGLDGDHEVFKHYFNEDVPESLK
KGGVTGCFTMGGILGIIMVTALILIGVLTS
>Mature_190_residues
MDIEEIKKKYQETMQYIEDKEFSNAEKELENIIETKPDFAPAYNKLGVVKARQGELDSALECFNKAAELWPEFSAPYSNV
GNVYMEKGDDITAEKYYKHALSINEQNRIPYNNLARIYKKRRQIGKFIKYQKLSHKHSGLDGDHEVFKHYFNEDVPESLK
KGGVTGCFTMGGILGIIMVTALILIGVLTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21723; Mature: 21723

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIEEIKKKYQETMQYIEDKEFSNAEKELENIIETKPDFAPAYNKLGVVKARQGELDSAL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHH
ECFNKAAELWPEFSAPYSNVGNVYMEKGDDITAEKYYKHALSINEQNRIPYNNLARIYKK
HHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
RRQIGKFIKYQKLSHKHSGLDGDHEVFKHYFNEDVPESLKKGGVTGCFTMGGILGIIMVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
ALILIGVLTS
HHHHHHHHCC
>Mature Secondary Structure
MDIEEIKKKYQETMQYIEDKEFSNAEKELENIIETKPDFAPAYNKLGVVKARQGELDSAL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHH
ECFNKAAELWPEFSAPYSNVGNVYMEKGDDITAEKYYKHALSINEQNRIPYNNLARIYKK
HHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
RRQIGKFIKYQKLSHKHSGLDGDHEVFKHYFNEDVPESLKKGGVTGCFTMGGILGIIMVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
ALILIGVLTS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA