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The map label for this gene is 188587512

Identifier: 188587512

GI number: 188587512

Start: 3154474

End: 3154851

Strand: Reverse

Name: 188587512

Synonym: Nther_2923

Alternate gene names: NA

Gene position: 3154851-3154474 (Counterclockwise)

Preceding gene: 188587513

Following gene: 188587510

Centisome position: 99.66

GC content: 36.51

Gene sequence:

>378_bases
ATGTTCAAAAAAAAGCAGTCTCCCCAACAAGATAAAGTGGATACTATTATAGGGCATGGAACAGAATTTAAAGGGAATAT
TTCTGCTAAAGGCATTGTAAGAGTAGATGGAAAAATAGAAGGGGAAATTGCCACAGGGGATAATTTAATTGTGGGAGAAC
AGGGAAAAGTTTATGCTAATATTAAAAGTAAAAGCGTGACGATTGCCGGTGAAGTACATGGTAATATGGAATGTTCTGAA
AACCTGGAGATATTGTCTACAGGGAAATTATTCGGTGATGTCAAAGTTGCTAACTTATTTATAGATGATGGGGCGCTCTT
TGATGGTAATTGTGAGATGAAGCAAAAAAAGGAGCAAACAAAACAGCAGCAACAATAG

Upstream 100 bases:

>100_bases
AGCACAGCTCCTCATTTACATTATGAAGTGCATGTGAACAATTCTCCTGAGAATCCCCGGGAATACATGACGGAATAGCT
AGTCCATAAGGAGGAATAAT

Downstream 100 bases:

>100_bases
TTTAACTAATGATCAATTTTTAACCTTAGGTACAGACTCTGTCTGTACCTTTTTTATATAATGATTTGTTGCCCATGAGA
TTCCTCTGCTAATAATCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MFKKKQSPQQDKVDTIIGHGTEFKGNISAKGIVRVDGKIEGEIATGDNLIVGEQGKVYANIKSKSVTIAGEVHGNMECSE
NLEILSTGKLFGDVKVANLFIDDGALFDGNCEMKQKKEQTKQQQQ

Sequences:

>Translated_125_residues
MFKKKQSPQQDKVDTIIGHGTEFKGNISAKGIVRVDGKIEGEIATGDNLIVGEQGKVYANIKSKSVTIAGEVHGNMECSE
NLEILSTGKLFGDVKVANLFIDDGALFDGNCEMKQKKEQTKQQQQ
>Mature_125_residues
MFKKKQSPQQDKVDTIIGHGTEFKGNISAKGIVRVDGKIEGEIATGDNLIVGEQGKVYANIKSKSVTIAGEVHGNMECSE
NLEILSTGKLFGDVKVANLFIDDGALFDGNCEMKQKKEQTKQQQQ

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13615; Mature: 13615

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKKQSPQQDKVDTIIGHGTEFKGNISAKGIVRVDGKIEGEIATGDNLIVGEQGKVYAN
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCEEEEEEECCCEEEECCCCEEEEE
IKSKSVTIAGEVHGNMECSENLEILSTGKLFGDVKVANLFIDDGALFDGNCEMKQKKEQT
ECCCEEEEEEEECCCCCCCCCEEEEECCCEECCEEEEEEEEECCEEECCCCCCHHHHHHH
KQQQQ
HHHCC
>Mature Secondary Structure
MFKKKQSPQQDKVDTIIGHGTEFKGNISAKGIVRVDGKIEGEIATGDNLIVGEQGKVYAN
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCEEEEEEECCCEEEECCCCEEEEE
IKSKSVTIAGEVHGNMECSENLEILSTGKLFGDVKVANLFIDDGALFDGNCEMKQKKEQT
ECCCEEEEEEEECCCCCCCCCEEEEECCCEECCEEEEEEEEECCEEECCCCCCHHHHHHH
KQQQQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA