| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188587487
Identifier: 188587487
GI number: 188587487
Start: 3128902
End: 3130056
Strand: Reverse
Name: 188587487
Synonym: Nther_2897
Alternate gene names: NA
Gene position: 3130056-3128902 (Counterclockwise)
Preceding gene: 188587488
Following gene: 188587486
Centisome position: 98.88
GC content: 39.05
Gene sequence:
>1155_bases TTGACAAATAGCAAAATTTGGTTTGCAGACGCGAGAGCGACGGAGTTTGATTATTATTACAGTTTGGTAGCCAAGTTAGA GGAAATTTTAGATCAGGTAGATGTAGGGAACTATTTTGAAAAAGATGATTACGTAGCTATTAAAACTCATTTTGGATCCT ATGGAGGACACAGGGTTGTTAGACCTATTTTTATTCAAAAAGTAGTTGAAGCTGTGAAACAAGCGGGAGGAAAACCTTTT GTAACTGATACTGTCCGCATTCCTGGTATTGAATACCTAGAAGTGGCCAATAGTGAAGGTTTAAATCACCTGTCTTTAGG AGCTCCCATGGTCTTAGCTGATGGTTTATTTGGCAAGGATTTAGTAAATGTAGAGTCAGGCCCGATTTTAGGTGAAATAG GTATTGCATCGGCAATTCATGATGCACCAAGTATGATTGTAATCTCTCATTGTAAAGGTCATATCGGCTCTGGTTTTGGC GGAGCAATCAAAAATCTTGGTATGGGAGCAATTAGTTGTAAAAATGAGTGTGGACATGCGGAACGGGGACGTATTCACTT TGCTCAAAATACTGGTTTGAAGTGGGAACCCGAAAATTGTACTCTTTGTGAAAGATGTGTAGATGTCTGTCCCCATGATG CGATATATCGTACTGAAGAAGATCAAATAGAAATTAATTATGAAATATGTGTGAAATGTGGACGTTGTGCCAGGGTATGT AAAGAAGAAGCTTTAATTGTACCCCAATCTGAAGAGCGCTTCCAAAAGGGGTTAAGTGAAGCAGCCTATGCAGCTGTACA GACATTCCAAGAAGGAAGAATTTTATACATAAACTTTATATTAGAAGTTCAACCTGAATGTGACTGTATGCCCATGGCAG ATACCCCTCTCATCCAGGATCAGGGAGTGCTAGTATCTGATGATATAGTTGCTATTGAACAAGCCACTCTAGATATTATA AAAGAAGCTGAACCCCTACCTCAGTCAAAAGCAGCGGAAAACAATGTCACTCCTGGCAAGGAATTGTTTAATCAAGTCAC TGGTAAACATCCACAGTGGCATGTAGATTACGCCGAGGAATTAGGCATGGGGCAAAAAGATTATGATTTAATAAAAGTCA ACAGTAAAGAAAAACCTGAAGAAGACAAAAAGTAA
Upstream 100 bases:
>100_bases TGAGTATGATAAAGGAAGAATTGTCAAAATGAATGATACATCTCATTTATTTAATTAAGACTTTTAGTCTTAATAACTTT ACTAGCAGGAGGGATGGAAC
Downstream 100 bases:
>100_bases GTGACTTATAAACTACAACAATAGATGATTCTTTTAGATAATTGTTGAGAAAGTGAGGGAAACCGGTGGAAGTTGCTGTT TTAGCTAGTGGAAGTAATGG
Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Products: NA
Alternate protein names: Ferredoxin; Fe-S Cluster Protein; 2(4Fe-4S) Ferredoxin-Domain-Containing Protein; 4fe-4S Ferredoxin; Ferridoxin; Fe-S Center Containing Protein
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTNSKIWFADARATEFDYYYSLVAKLEEILDQVDVGNYFEKDDYVAIKTHFGSYGGHRVVRPIFIQKVVEAVKQAGGKPF VTDTVRIPGIEYLEVANSEGLNHLSLGAPMVLADGLFGKDLVNVESGPILGEIGIASAIHDAPSMIVISHCKGHIGSGFG GAIKNLGMGAISCKNECGHAERGRIHFAQNTGLKWEPENCTLCERCVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVC KEEALIVPQSEERFQKGLSEAAYAAVQTFQEGRILYINFILEVQPECDCMPMADTPLIQDQGVLVSDDIVAIEQATLDII KEAEPLPQSKAAENNVTPGKELFNQVTGKHPQWHVDYAEELGMGQKDYDLIKVNSKEKPEEDKK
Sequences:
>Translated_384_residues MTNSKIWFADARATEFDYYYSLVAKLEEILDQVDVGNYFEKDDYVAIKTHFGSYGGHRVVRPIFIQKVVEAVKQAGGKPF VTDTVRIPGIEYLEVANSEGLNHLSLGAPMVLADGLFGKDLVNVESGPILGEIGIASAIHDAPSMIVISHCKGHIGSGFG GAIKNLGMGAISCKNECGHAERGRIHFAQNTGLKWEPENCTLCERCVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVC KEEALIVPQSEERFQKGLSEAAYAAVQTFQEGRILYINFILEVQPECDCMPMADTPLIQDQGVLVSDDIVAIEQATLDII KEAEPLPQSKAAENNVTPGKELFNQVTGKHPQWHVDYAEELGMGQKDYDLIKVNSKEKPEEDKK >Mature_383_residues TNSKIWFADARATEFDYYYSLVAKLEEILDQVDVGNYFEKDDYVAIKTHFGSYGGHRVVRPIFIQKVVEAVKQAGGKPFV TDTVRIPGIEYLEVANSEGLNHLSLGAPMVLADGLFGKDLVNVESGPILGEIGIASAIHDAPSMIVISHCKGHIGSGFGG AIKNLGMGAISCKNECGHAERGRIHFAQNTGLKWEPENCTLCERCVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVCK EEALIVPQSEERFQKGLSEAAYAAVQTFQEGRILYINFILEVQPECDCMPMADTPLIQDQGVLVSDDIVAIEQATLDIIK EAEPLPQSKAAENNVTPGKELFNQVTGKHPQWHVDYAEELGMGQKDYDLIKVNSKEKPEEDKK
Specific function: Unknown
COG id: COG2768
COG function: function code R; Uncharacterized Fe-S center protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42471; Mature: 42339
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSKIWFADARATEFDYYYSLVAKLEEILDQVDVGNYFEKDDYVAIKTHFGSYGGHRVV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHH RPIFIQKVVEAVKQAGGKPFVTDTVRIPGIEYLEVANSEGLNHLSLGAPMVLADGLFGKD HHHHHHHHHHHHHHCCCCCEEECEEECCCCCEEEECCCCCCCEECCCCCCEEECCCCCCC LVNVESGPILGEIGIASAIHDAPSMIVISHCKGHIGSGFGGAIKNLGMGAISCKNECGHA EECCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCEEECCHHCCCC ERGRIHFAQNTGLKWEPENCTLCERCVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVC CCCEEEEEECCCCEECCCCCHHHHHHHHHCCCCCEECCCCCCEEEEHHHHHHHHHHHHHH KEEALIVPQSEERFQKGLSEAAYAAVQTFQEGRILYINFILEVQPECDCMPMADTPLIQD HHCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCC QGVLVSDDIVAIEQATLDIIKEAEPLPQSKAAENNVTPGKELFNQVTGKHPQWHVDYAEE CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECHHHH LGMGQKDYDLIKVNSKEKPEEDKK CCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure TNSKIWFADARATEFDYYYSLVAKLEEILDQVDVGNYFEKDDYVAIKTHFGSYGGHRVV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHH RPIFIQKVVEAVKQAGGKPFVTDTVRIPGIEYLEVANSEGLNHLSLGAPMVLADGLFGKD HHHHHHHHHHHHHHCCCCCEEECEEECCCCCEEEECCCCCCCEECCCCCCEEECCCCCCC LVNVESGPILGEIGIASAIHDAPSMIVISHCKGHIGSGFGGAIKNLGMGAISCKNECGHA EECCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCEEECCHHCCCC ERGRIHFAQNTGLKWEPENCTLCERCVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVC CCCEEEEEECCCCEECCCCCHHHHHHHHHCCCCCEECCCCCCEEEEHHHHHHHHHHHHHH KEEALIVPQSEERFQKGLSEAAYAAVQTFQEGRILYINFILEVQPECDCMPMADTPLIQD HHCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCC QGVLVSDDIVAIEQATLDIIKEAEPLPQSKAAENNVTPGKELFNQVTGKHPQWHVDYAEE CCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECHHHH LGMGQKDYDLIKVNSKEKPEEDKK CCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA