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The map label for this gene is yycJ [H]

Identifier: 188587486

GI number: 188587486

Start: 3128051

End: 3128836

Strand: Reverse

Name: yycJ [H]

Synonym: Nther_2896

Alternate gene names: 188587486

Gene position: 3128836-3128051 (Counterclockwise)

Preceding gene: 188587487

Following gene: 188587485

Centisome position: 98.84

GC content: 35.62

Gene sequence:

>786_bases
GTGGAAGTTGCTGTTTTAGCTAGTGGAAGTAATGGAAATTCAATTTATATAGAATACTATGATACTAAGCTTTTAATTGA
TGCTGGTCTGTCCGGGAAAGCAATTGAGAGGAAAATGGCCAATGTAAATAAAGATCCTAAAGAATTAACGGGTATAATTG
TCACCCACGAACATAGAGATCATGTAAAAGGTGTGGGAGTCCTAGCTAGACGTTTTAATATCCCTGTTTATGCAACTAGA
GATACTTGGCCATTATTGCCAAGTATAATAGGAACTGTCCCTGAGAAATCTGAGAAAGAACTTCCCAAACAAGGCTTATA
TATACAAGATCTTTACATTGAACCATTTCCTGTAAGCCATGACGCTGTTGATCCAGTGGGACTGTGTCTTTATACACCTG
AGAAAAAGTTAGGTATTGCAACTGATTCAGGGATTTTTACACCACCCATGTTTAAGAAACTTACTAATTGTCATGGATTG
ATTTTAGAATCAAATCACGATCCAGATTTGTTATCTCGTAGCAGTTACCCCGAATACCTTAAAAAAAGAATTCGTAGCAG
GAAGGGTCATATATCTAATAATACTTTGGTTCATTGTTTACCTAATTTAATTAATGAAAATTTACGTTGGTTAATTCTTG
GTCATTTAAGTGAGAATAATAATTGTCCTGATCTGGTCAGGAACTTTGTATCAAACTCTTTAAGCAAGATAGGACAGGAT
ATGGGTATTGATGTACCTTTTAAAGTTGCCGAAAGATCTGGCCCCCCTATAACATTCACTCTTTAA

Upstream 100 bases:

>100_bases
ACAGTAAAGAAAAACCTGAAGAAGACAAAAAGTAAGTGACTTATAAACTACAACAATAGATGATTCTTTTAGATAATTGT
TGAGAAAGTGAGGGAAACCG

Downstream 100 bases:

>100_bases
TTAATAAACCATTTGAAGCTCGTAAAATGGCTGTGCTATAATTTTATCACAGCTATCAAAACTAGAGGGGGTAATAACAT
GTCTTTTTATAAACGACAAG

Product: beta-lactamase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MEVAVLASGSNGNSIYIEYYDTKLLIDAGLSGKAIERKMANVNKDPKELTGIIVTHEHRDHVKGVGVLARRFNIPVYATR
DTWPLLPSIIGTVPEKSEKELPKQGLYIQDLYIEPFPVSHDAVDPVGLCLYTPEKKLGIATDSGIFTPPMFKKLTNCHGL
ILESNHDPDLLSRSSYPEYLKKRIRSRKGHISNNTLVHCLPNLINENLRWLILGHLSENNNCPDLVRNFVSNSLSKIGQD
MGIDVPFKVAERSGPPITFTL

Sequences:

>Translated_261_residues
MEVAVLASGSNGNSIYIEYYDTKLLIDAGLSGKAIERKMANVNKDPKELTGIIVTHEHRDHVKGVGVLARRFNIPVYATR
DTWPLLPSIIGTVPEKSEKELPKQGLYIQDLYIEPFPVSHDAVDPVGLCLYTPEKKLGIATDSGIFTPPMFKKLTNCHGL
ILESNHDPDLLSRSSYPEYLKKRIRSRKGHISNNTLVHCLPNLINENLRWLILGHLSENNNCPDLVRNFVSNSLSKIGQD
MGIDVPFKVAERSGPPITFTL
>Mature_261_residues
MEVAVLASGSNGNSIYIEYYDTKLLIDAGLSGKAIERKMANVNKDPKELTGIIVTHEHRDHVKGVGVLARRFNIPVYATR
DTWPLLPSIIGTVPEKSEKELPKQGLYIQDLYIEPFPVSHDAVDPVGLCLYTPEKKLGIATDSGIFTPPMFKKLTNCHGL
ILESNHDPDLLSRSSYPEYLKKRIRSRKGHISNNTLVHCLPNLINENLRWLILGHLSENNNCPDLVRNFVSNSLSKIGQD
MGIDVPFKVAERSGPPITFTL

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 29123; Mature: 29123

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVAVLASGSNGNSIYIEYYDTKLLIDAGLSGKAIERKMANVNKDPKELTGIIVTHEHRD
CEEEEEEECCCCCEEEEEEECEEEEEECCCCCHHHHHHHHHCCCCHHHHEEEEEEECCHH
HVKGVGVLARRFNIPVYATRDTWPLLPSIIGTVPEKSEKELPKQGLYIQDLYIEPFPVSH
HHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCC
DAVDPVGLCLYTPEKKLGIATDSGIFTPPMFKKLTNCHGLILESNHDPDLLSRSSYPEYL
CCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHCCCCEEEEECCCCCCHHCCCCCHHHH
KKRIRSRKGHISNNTLVHCLPNLINENLRWLILGHLSENNNCPDLVRNFVSNSLSKIGQD
HHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
MGIDVPFKVAERSGPPITFTL
CCCCCCEEECCCCCCCEEEEC
>Mature Secondary Structure
MEVAVLASGSNGNSIYIEYYDTKLLIDAGLSGKAIERKMANVNKDPKELTGIIVTHEHRD
CEEEEEEECCCCCEEEEEEECEEEEEECCCCCHHHHHHHHHCCCCHHHHEEEEEEECCHH
HVKGVGVLARRFNIPVYATRDTWPLLPSIIGTVPEKSEKELPKQGLYIQDLYIEPFPVSH
HHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCC
DAVDPVGLCLYTPEKKLGIATDSGIFTPPMFKKLTNCHGLILESNHDPDLLSRSSYPEYL
CCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHCCCCEEEEECCCCCCHHCCCCCHHHH
KKRIRSRKGHISNNTLVHCLPNLINENLRWLILGHLSENNNCPDLVRNFVSNSLSKIGQD
HHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
MGIDVPFKVAERSGPPITFTL
CCCCCCEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]