| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is pyrG
Identifier: 188587477
GI number: 188587477
Start: 3118187
End: 3119800
Strand: Direct
Name: pyrG
Synonym: Nther_2887
Alternate gene names: 188587477
Gene position: 3118187-3119800 (Clockwise)
Preceding gene: 188587476
Following gene: 188587481
Centisome position: 98.5
GC content: 38.91
Gene sequence:
>1614_bases ATGAGTAAATACATTTTCGTAACCGGAGGCGTAGCATCATCCCTGGGAAAAGGAATCTCAGCAGCTTCAATCGGTCGCTT ACTAAAAAATCGTGGCTTAAATGTCACTATCCAAAAGTTTGATCCTTATATTAATATTGATCCTGGCACAATGAGCCCAT ACCAACACGGTGAAGTTTTTGTGACCGAGGACGGTGCCGAAACCGACCTAGACCTGGGTCATTATGAGCGATTTATTGAT GAAAACCTAAGTAGAATCAACAATATAACCACTGGGAAAATCTACTGGTCAGTACTCAGTAAAGAAAGAAAAGGTGAGTA TTTAGGAAAAACTGTGCAAGTAATCCCCCATATAACCGATGAGATTAAATCTCGCATTTACCAGGCCAGTAAAGATAACG ATGCAGATGTGGTAATAGCTGAAATAGGTGGAACTGTGGGGGATATTGAAAGTCTACCCTTTTTAGAGGCTATTAGGCAA ATGAGAAGTGATATCGGTCGTGATTCCGTCATGTATATTCACGTTACCCTAGTCCCTTATTTGGAAAAATCCGGGGAATT AAAAACTAAACCTACTCAACACAGTGTAAAAGAACTCAGAAGCCTAGGTATTCAACCCGATATGGTAATTTGTCGAACTC ATTACGAACTGTCCCAAGAAATCAAAGAAAAACTAGCATTATTTTGTGATATTGATGTAAATGCAGTCATTGAAAATTTA GATGTAGAAAATATTTATGAAGTACCTATGGCCCTGAATGAACAGCGGGTAGATGGACTAATAGCAGATAGGTTAAATTT AAATTCAGGTAGCTTGGAGTTGGAAAGATGGAAGCAACTTGTTGACCAGATAAAGAATTTATCTCAGGAAATAACTATCG GGTTAGTAGGAAAATACGTTTCTCTACAGGATGCCTATATTAGCGTAACAGAGGCTTTGGACCACGCTGGTTTTAATTAC GATTCCAAAGTTAAAGTCAAATGGATTAACTCTGAGGAATTAGAGAAAAACGGTTCAGTTGAAACAGCATTTCAAGGAGT TGACGGTATTTTAGTCCCAGGTGGTTTCGGAGATAGAGGAATTGGAGGAAAAATAATGGCAGCTCAATATGCCAGGAAAA ACAATATTCCATTTTTAGGAATTTGTCTTGGTATGCATTGTTCTGTAATTGATTTTGCTCACGAAGTTGCTGGTTTAAAT GGGGCTTACAGTTCGGAGTTTCATCCAGAAACACCATATCCTGTAATTGATCTGCTCCCCGAACAAAAGGAGGTAAAAGA TCTAGGGGGAACTATGCGTCTAGGTGCTTATCCATGCAAGTTAATTGAGGGAACTCGTGCCTATGAAGCCTATCAACAGG ATATCGTCCAGGAACGACATAGGCATAGATACGAATTTAATAATGATTACAAAGAACAGCTTACGAACAATGGCCTAGTT GTCTCAGGGGTTTCACCTGATGATCGTCTTGTTGAAATTGTGGAGTTAGAAGATCATCCATGGTTTGTAGCCACTCAATT CCATCCAGAATTTAAATCAAGACCAGGAGCTCCACATCCTTTATTTAATAGTTTTGTTCAGCAAGCATTAAAAAACAGCC TTTCATCCAAATGA
Upstream 100 bases:
>100_bases ATTTAAAATCATAATTTAACCGGTTGCAAATCCAGTGTTAGTATTAGATAATATAAGACATGAGTGCAAGTCGTGGAATA CTATACAGGAGGGTGCCAGA
Downstream 100 bases:
>100_bases TGAGAGGCTGTTTTTATTAACACTCATTTATGCTTTGTTGATTATTACAGATTATAGCTACAAAATCCTGTAAAATTTTA AACCTAACCTGTTCTCCAAT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MSKYIFVTGGVASSLGKGISAASIGRLLKNRGLNVTIQKFDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFID ENLSRINNITTGKIYWSVLSKERKGEYLGKTVQVIPHITDEIKSRIYQASKDNDADVVIAEIGGTVGDIESLPFLEAIRQ MRSDIGRDSVMYIHVTLVPYLEKSGELKTKPTQHSVKELRSLGIQPDMVICRTHYELSQEIKEKLALFCDIDVNAVIENL DVENIYEVPMALNEQRVDGLIADRLNLNSGSLELERWKQLVDQIKNLSQEITIGLVGKYVSLQDAYISVTEALDHAGFNY DSKVKVKWINSEELEKNGSVETAFQGVDGILVPGGFGDRGIGGKIMAAQYARKNNIPFLGICLGMHCSVIDFAHEVAGLN GAYSSEFHPETPYPVIDLLPEQKEVKDLGGTMRLGAYPCKLIEGTRAYEAYQQDIVQERHRHRYEFNNDYKEQLTNNGLV VSGVSPDDRLVEIVELEDHPWFVATQFHPEFKSRPGAPHPLFNSFVQQALKNSLSSK
Sequences:
>Translated_537_residues MSKYIFVTGGVASSLGKGISAASIGRLLKNRGLNVTIQKFDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFID ENLSRINNITTGKIYWSVLSKERKGEYLGKTVQVIPHITDEIKSRIYQASKDNDADVVIAEIGGTVGDIESLPFLEAIRQ MRSDIGRDSVMYIHVTLVPYLEKSGELKTKPTQHSVKELRSLGIQPDMVICRTHYELSQEIKEKLALFCDIDVNAVIENL DVENIYEVPMALNEQRVDGLIADRLNLNSGSLELERWKQLVDQIKNLSQEITIGLVGKYVSLQDAYISVTEALDHAGFNY DSKVKVKWINSEELEKNGSVETAFQGVDGILVPGGFGDRGIGGKIMAAQYARKNNIPFLGICLGMHCSVIDFAHEVAGLN GAYSSEFHPETPYPVIDLLPEQKEVKDLGGTMRLGAYPCKLIEGTRAYEAYQQDIVQERHRHRYEFNNDYKEQLTNNGLV VSGVSPDDRLVEIVELEDHPWFVATQFHPEFKSRPGAPHPLFNSFVQQALKNSLSSK >Mature_536_residues SKYIFVTGGVASSLGKGISAASIGRLLKNRGLNVTIQKFDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDE NLSRINNITTGKIYWSVLSKERKGEYLGKTVQVIPHITDEIKSRIYQASKDNDADVVIAEIGGTVGDIESLPFLEAIRQM RSDIGRDSVMYIHVTLVPYLEKSGELKTKPTQHSVKELRSLGIQPDMVICRTHYELSQEIKEKLALFCDIDVNAVIENLD VENIYEVPMALNEQRVDGLIADRLNLNSGSLELERWKQLVDQIKNLSQEITIGLVGKYVSLQDAYISVTEALDHAGFNYD SKVKVKWINSEELEKNGSVETAFQGVDGILVPGGFGDRGIGGKIMAAQYARKNNIPFLGICLGMHCSVIDFAHEVAGLNG AYSSEFHPETPYPVIDLLPEQKEVKDLGGTMRLGAYPCKLIEGTRAYEAYQQDIVQERHRHRYEFNNDYKEQLTNNGLVV SGVSPDDRLVEIVELEDHPWFVATQFHPEFKSRPGAPHPLFNSFVQQALKNSLSSK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI28559085, Length=566, Percent_Identity=45.7597173144876, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI28559083, Length=566, Percent_Identity=45.7597173144876, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI221316689, Length=566, Percent_Identity=45.7597173144876, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI148491070, Length=540, Percent_Identity=48.3333333333333, Blast_Score=484, Evalue=1e-136, Organism=Escherichia coli, GI1789142, Length=538, Percent_Identity=56.3197026022305, Blast_Score=597, Evalue=1e-172, Organism=Caenorhabditis elegans, GI25148299, Length=602, Percent_Identity=39.8671096345515, Blast_Score=436, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319432, Length=559, Percent_Identity=43.4704830053667, Blast_Score=456, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6322563, Length=560, Percent_Identity=44.1071428571429, Blast_Score=448, Evalue=1e-127, Organism=Drosophila melanogaster, GI24664469, Length=544, Percent_Identity=45.7720588235294, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=485, Percent_Identity=43.7113402061856, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_NATTJ (B2A3K5)
Other databases:
- EMBL: CP001034 - RefSeq: YP_001919022.1 - ProteinModelPortal: B2A3K5 - SMR: B2A3K5 - GeneID: 6315712 - GenomeReviews: CP001034_GR - KEGG: nth:Nther_2887 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60058; Mature: 59927
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 382-382 ACT_SITE 508-508 ACT_SITE 510-510
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYIFVTGGVASSLGKGISAASIGRLLKNRGLNVTIQKFDPYINIDPGTMSPYQHGEVF CCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCEEE VTEDGAETDLDLGHYERFIDENLSRINNITTGKIYWSVLSKERKGEYLGKTVQVIPHITD EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHH EIKSRIYQASKDNDADVVIAEIGGTVGDIESLPFLEAIRQMRSDIGRDSVMYIHVTLVPY HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEH LEKSGELKTKPTQHSVKELRSLGIQPDMVICRTHYELSQEIKEKLALFCDIDVNAVIENL HCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHEEECCCHHHHHHCC DVENIYEVPMALNEQRVDGLIADRLNLNSGSLELERWKQLVDQIKNLSQEITIGLVGKYV CHHHHHHCCHHCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCHHHEEEEEHCCHH SLQDAYISVTEALDHAGFNYDSKVKVKWINSEELEKNGSVETAFQGVDGILVPGGFGDRG HHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCCHHHHHCCCCCEEECCCCCCCC IGGKIMAAQYARKNNIPFLGICLGMHCSVIDFAHEVAGLNGAYSSEFHPETPYPVIDLLP CCCCCHHHHHHHCCCCCEEEEHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC EQKEVKDLGGTMRLGAYPCKLIEGTRAYEAYQQDIVQERHRHRYEFNNDYKEQLTNNGLV CHHHHHHCCCCEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEE VSGVSPDDRLVEIVELEDHPWFVATQFHPEFKSRPGAPHPLFNSFVQQALKNSLSSK EECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKYIFVTGGVASSLGKGISAASIGRLLKNRGLNVTIQKFDPYINIDPGTMSPYQHGEVF CCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCEEE VTEDGAETDLDLGHYERFIDENLSRINNITTGKIYWSVLSKERKGEYLGKTVQVIPHITD EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHH EIKSRIYQASKDNDADVVIAEIGGTVGDIESLPFLEAIRQMRSDIGRDSVMYIHVTLVPY HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEH LEKSGELKTKPTQHSVKELRSLGIQPDMVICRTHYELSQEIKEKLALFCDIDVNAVIENL HCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHEEECCCHHHHHHCC DVENIYEVPMALNEQRVDGLIADRLNLNSGSLELERWKQLVDQIKNLSQEITIGLVGKYV CHHHHHHCCHHCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCHHHEEEEEHCCHH SLQDAYISVTEALDHAGFNYDSKVKVKWINSEELEKNGSVETAFQGVDGILVPGGFGDRG HHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCCHHHHHCCCCCEEECCCCCCCC IGGKIMAAQYARKNNIPFLGICLGMHCSVIDFAHEVAGLNGAYSSEFHPETPYPVIDLLP CCCCCHHHHHHHCCCCCEEEEHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC EQKEVKDLGGTMRLGAYPCKLIEGTRAYEAYQQDIVQERHRHRYEFNNDYKEQLTNNGLV CHHHHHHCCCCEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEE VSGVSPDDRLVEIVELEDHPWFVATQFHPEFKSRPGAPHPLFNSFVQQALKNSLSSK EECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA