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The map label for this gene is spoIIR [H]

Identifier: 188587459

GI number: 188587459

Start: 3101016

End: 3101720

Strand: Reverse

Name: spoIIR [H]

Synonym: Nther_2869

Alternate gene names: 188587459

Gene position: 3101720-3101016 (Counterclockwise)

Preceding gene: 188587460

Following gene: 188587458

Centisome position: 97.98

GC content: 35.04

Gene sequence:

>705_bases
ATGATTAATATGAACAAATTTATTAATAAATTCAGGGAGTTAACAGACCGTACAAAACTATTAATCATTACGCACAAGAT
AACTAAGAGAACATTTCTAATTATATTTATGTGTGTTTTGGGAGTATTTTTTGCTACCCACTCACTGTTTCTAGGTGTAG
AAGAGTTAACGAACTCTATTGGCCATAGGCATGAGTCTCAAAATCAAGTTGATGAAGATATACTTAGATTACATATAATA
CCAAATAGTGATCTGGAACAGGATCAAGATGCTAAGGAAAAAGTTAGAAATTGGCTAATAGGAGAATTAATGAAAAACAG
GGAGATAAAAAACAGAAGGGCATTTACTAATTACATAGAAACCCATAAGGATGAACTTGAGGAGGAAATGGAAAATCACT
TAGTAAATAACGGTTATTACCATGATGTTAACTTATCCCTAAAGGAGAAAGTGTTTCCAACTAGGAGATATCGGACTGAA
GTTTTACCAGGAGGAGAGTACGAATCTCTAGTTGTTACTTTAGATAAAGGTCAGGGAAGCAATTGGTGGTGCGTCCTATT
CCCCCCATTATGCTACGTGGACTTGGCAGTCATGAATGACGAGAAATTAGAAGATCCCGAAGAAGATCAGGAGACAAAAG
GGGATAGTGATGAGCTAGAACTTAAATTTGTATTGTTTGAATGGGTTTCTGAACTGTTATCATAA

Upstream 100 bases:

>100_bases
CAGGCCCAGGTTTCTCGTTTGGAGAAATCAGCTTTATTACAGTTGAGAAAACTAGTTAAAGAAGAAGTGGCAGCTAATCG
GGAGGGGAGGTCGAATCAAG

Downstream 100 bases:

>100_bases
ATCAAGATCTTTCCGGTTGCTAAAGTCTGTGTAATAAATTATAATGGCGTAGAGTGATAGTAAACAAACTAGCGGGGGGT
ACCTTAAGTGGGAACAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MINMNKFINKFRELTDRTKLLIITHKITKRTFLIIFMCVLGVFFATHSLFLGVEELTNSIGHRHESQNQVDEDILRLHII
PNSDLEQDQDAKEKVRNWLIGELMKNREIKNRRAFTNYIETHKDELEEEMENHLVNNGYYHDVNLSLKEKVFPTRRYRTE
VLPGGEYESLVVTLDKGQGSNWWCVLFPPLCYVDLAVMNDEKLEDPEEDQETKGDSDELELKFVLFEWVSELLS

Sequences:

>Translated_234_residues
MINMNKFINKFRELTDRTKLLIITHKITKRTFLIIFMCVLGVFFATHSLFLGVEELTNSIGHRHESQNQVDEDILRLHII
PNSDLEQDQDAKEKVRNWLIGELMKNREIKNRRAFTNYIETHKDELEEEMENHLVNNGYYHDVNLSLKEKVFPTRRYRTE
VLPGGEYESLVVTLDKGQGSNWWCVLFPPLCYVDLAVMNDEKLEDPEEDQETKGDSDELELKFVLFEWVSELLS
>Mature_234_residues
MINMNKFINKFRELTDRTKLLIITHKITKRTFLIIFMCVLGVFFATHSLFLGVEELTNSIGHRHESQNQVDEDILRLHII
PNSDLEQDQDAKEKVRNWLIGELMKNREIKNRRAFTNYIETHKDELEEEMENHLVNNGYYHDVNLSLKEKVFPTRRYRTE
VLPGGEYESLVVTLDKGQGSNWWCVLFPPLCYVDLAVMNDEKLEDPEEDQETKGDSDELELKFVLFEWVSELLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 27638; Mature: 27638

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINMNKFINKFRELTDRTKLLIITHKITKRTFLIIFMCVLGVFFATHSLFLGVEELTNSI
CCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHRHESQNQVDEDILRLHIIPNSDLEQDQDAKEKVRNWLIGELMKNREIKNRRAFTNYIE
HCCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
THKDELEEEMENHLVNNGYYHDVNLSLKEKVFPTRRYRTEVLPGGEYESLVVTLDKGQGS
HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCC
NWWCVLFPPLCYVDLAVMNDEKLEDPEEDQETKGDSDELELKFVLFEWVSELLS
CEEEEEECHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MINMNKFINKFRELTDRTKLLIITHKITKRTFLIIFMCVLGVFFATHSLFLGVEELTNSI
CCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHRHESQNQVDEDILRLHIIPNSDLEQDQDAKEKVRNWLIGELMKNREIKNRRAFTNYIE
HCCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
THKDELEEEMENHLVNNGYYHDVNLSLKEKVFPTRRYRTEVLPGGEYESLVVTLDKGQGS
HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCC
NWWCVLFPPLCYVDLAVMNDEKLEDPEEDQETKGDSDELELKFVLFEWVSELLS
CEEEEEECHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]