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The map label for this gene is sdaAB [H]

Identifier: 188587443

GI number: 188587443

Start: 3085151

End: 3085816

Strand: Direct

Name: sdaAB [H]

Synonym: Nther_2853

Alternate gene names: 188587443

Gene position: 3085151-3085816 (Clockwise)

Preceding gene: 188587421

Following gene: 188587444

Centisome position: 97.46

GC content: 37.54

Gene sequence:

>666_bases
ATGAATACGAGCGTTTTTGATGTGTTGGGGCCTGTTATGATAGGTCCATCTAGTTCACATACAGCGGGAGCATGTCGTTT
GGGTTTAATGGCAAGAAAAATACTGCAAGATGAGCCAGTACAAGCAACAGTATTCCTTCATGAATCCTTTCAAAAAACTA
GATACGGTCATGGTACTGAAGTGGCCATTCTTGGTGGAATATTGGGAATTGCCCCGGATAACGAACAATTAAATGAAGCC
AAGGAAATTGCTAAATCAAAACAAGTCTCTTTTTTATTTCAGGAGAAAGATTTAAAAGGAGAACATCCTAATTCATGTCA
AATTAACTTAACAGCTCCAGATGGTAACCAGGTTACAATTGTTGGTTCTTCACTAGGTGGGGGTCTGATACAGATTTCAC
AAGTTGATGACTTTAATGTTAAGTTGTCAGGACAATACCATGCCTTAATAACCAAACATTTGGATCGTCCAGGATTAGTT
TTCCGAATTACAAGATATCTTTCCGATCAAGAAATTAATATTGCCTATATGCAAGTTTCACGGACTAGAAAGGGAGATAC
AGCATCTTTAATACTTGAAACTGATGATCCTATTTCCGAGTCTATTAAAGATAACTTAACCCAGGACGATGATATAGAAC
AAGCAAGAATTATTCAGCCGCTATAG

Upstream 100 bases:

>100_bases
AATAAAAGCTTTTACAAAAACCTACCTTTAAGTTAAGATACCACATATGCGGTAATTTTATCAAGCATTAGCAAATTAAA
TCTATAAGAGGTGATTATAT

Downstream 100 bases:

>100_bases
ATTTAACTAGAACTCAATGATTAGGAGGGATAAATATGAGCCATAACAATATCAGAGAAAGTTACAAAAACGGAAAGGAC
TTCGAATTTAATTCTTTAAG

Product: L-serine dehydratase, iron-sulfur-dependent, beta subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNTSVFDVLGPVMIGPSSSHTAGACRLGLMARKILQDEPVQATVFLHESFQKTRYGHGTEVAILGGILGIAPDNEQLNEA
KEIAKSKQVSFLFQEKDLKGEHPNSCQINLTAPDGNQVTIVGSSLGGGLIQISQVDDFNVKLSGQYHALITKHLDRPGLV
FRITRYLSDQEINIAYMQVSRTRKGDTASLILETDDPISESIKDNLTQDDDIEQARIIQPL

Sequences:

>Translated_221_residues
MNTSVFDVLGPVMIGPSSSHTAGACRLGLMARKILQDEPVQATVFLHESFQKTRYGHGTEVAILGGILGIAPDNEQLNEA
KEIAKSKQVSFLFQEKDLKGEHPNSCQINLTAPDGNQVTIVGSSLGGGLIQISQVDDFNVKLSGQYHALITKHLDRPGLV
FRITRYLSDQEINIAYMQVSRTRKGDTASLILETDDPISESIKDNLTQDDDIEQARIIQPL
>Mature_221_residues
MNTSVFDVLGPVMIGPSSSHTAGACRLGLMARKILQDEPVQATVFLHESFQKTRYGHGTEVAILGGILGIAPDNEQLNEA
KEIAKSKQVSFLFQEKDLKGEHPNSCQINLTAPDGNQVTIVGSSLGGGLIQISQVDDFNVKLSGQYHALITKHLDRPGLV
FRITRYLSDQEINIAYMQVSRTRKGDTASLILETDDPISESIKDNLTQDDDIEQARIIQPL

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 24200; Mature: 24200

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSVFDVLGPVMIGPSSSHTAGACRLGLMARKILQDEPVQATVFLHESFQKTRYGHGTE
CCCCHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCCCCE
VAILGGILGIAPDNEQLNEAKEIAKSKQVSFLFQEKDLKGEHPNSCQINLTAPDGNQVTI
EEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCEEEE
VGSSLGGGLIQISQVDDFNVKLSGQYHALITKHLDRPGLVFRITRYLSDQEINIAYMQVS
EECCCCCCEEEEEECCCCEEEECCCEEEEEEHHCCCCCCEEEEEHHCCCCCCEEEEEEEE
RTRKGDTASLILETDDPISESIKDNLTQDDDIEQARIIQPL
CCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MNTSVFDVLGPVMIGPSSSHTAGACRLGLMARKILQDEPVQATVFLHESFQKTRYGHGTE
CCCCHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCCCCE
VAILGGILGIAPDNEQLNEAKEIAKSKQVSFLFQEKDLKGEHPNSCQINLTAPDGNQVTI
EEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCEEEE
VGSSLGGGLIQISQVDDFNVKLSGQYHALITKHLDRPGLVFRITRYLSDQEINIAYMQVS
EECCCCCCEEEEEECCCCEEEECCCEEEEEEHHCCCCCCEEEEEHHCCCCCCEEEEEEEE
RTRKGDTASLILETDDPISESIKDNLTQDDDIEQARIIQPL
CCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]