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The map label for this gene is fdhB [H]

Identifier: 188587258

GI number: 188587258

Start: 2864946

End: 2865965

Strand: Reverse

Name: fdhB [H]

Synonym: Nther_2660

Alternate gene names: 188587258

Gene position: 2865965-2864946 (Counterclockwise)

Preceding gene: 188587259

Following gene: 188587257

Centisome position: 90.54

GC content: 37.94

Gene sequence:

>1020_bases
ATGCAAAAAATAACAGCAGAATTGAGAAAAATAGCCAAAAATCTATTGAGTTCAGGCCAAGTAGATATGGTCTTAGGATA
TACTCAAGGGGAACTGCCATATCAAACAGTTCCCTTTGTGGCTAGTTCTGAAGAAGATGTAGAAAACCTGGTCTTTGACG
GTTTTAGTGACAAGGCCTTATCCAAGTACCTCTTGGAAGATAACTTCCAAAGTAAAAAAATTGCTCTAGTTTTGAAAGGT
TGTGACTCTCGAGCACTTAAGCTAATGCTAGAAGAAAGTCGGGTTAACAGAGATAATCTATATCTAATTGGTGTTAACTG
TCCAGGAATCATTCGAAGAGATGCTTTGGCTAAACAGGCCGGATGCGATTTAAGCCAGGTAGATGTTGTACTACAGGAAG
ATAAAATTACCATCAACACAACTAATGGTTCAAATTGTGCTACAAGTTCCCAAGAAGTTTCATATCAGCAAGTAGTTTCA
CCATTTTGTTTAACCTGTGAACATCCTACTCCTTCCAAGGACCAAGTGGATACATTAATTGAAGAAGGAGAACCCAAGGC
TTTTTTAGACAATCAAACTTACAGTCATGAAGAAAGTTTTACTAATATTGGGGAACTAGAAAAATTGTCGGAAGAAGAGC
GGTTCGAATTCTGGAAAAAACAGTTGAATAGATGTAAACGATGTTACAGTTGTCGTAATGCATGTCCTGTTTGTACCTGT
AGAGTTTGTTTATTTGATAGAGAAAACCCTGATTATTTAGATAAAGCTACGGATCAACTTGCCCAGCATCAATTTTATCA
TGTTATCAGGGCATTTCATGTATCCGATCGCTGTGTTGGCTGTGGTGAGTGTTCAAGGGTTTGTCCTGAAAATATTCCAT
TGCACTTACTAAATCAAAAACTAGTTAAAGAATTAGAAAACTACTACGGTGAATATACGCCAGGTATAGACGAGTTACCA
GCACCGTTGTCTCAAGCTAATGCTGATGATCCGGATCCCTTCGAAAAGGAGGAGAAATAA

Upstream 100 bases:

>100_bases
GGATATCCGGTAACGAAGCAGCCAAATTTAAAGACACTGTCGAAAACTTTAATGAAAGACTTAAAAAACTTGGTGCTGCG
GACAAAGTGAGGGATATGAG

Downstream 100 bases:

>100_bases
TGAGCCAAATAATAAAGTTGAATTCCACGGCACAACTTTTGGAGGCATTCAAAGAATTAGAACAAGATTATCAAGTATAT
TGCCCAGTTACTCAAGATGA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQKITAELRKIAKNLLSSGQVDMVLGYTQGELPYQTVPFVASSEEDVENLVFDGFSDKALSKYLLEDNFQSKKIALVLKG
CDSRALKLMLEESRVNRDNLYLIGVNCPGIIRRDALAKQAGCDLSQVDVVLQEDKITINTTNGSNCATSSQEVSYQQVVS
PFCLTCEHPTPSKDQVDTLIEEGEPKAFLDNQTYSHEESFTNIGELEKLSEEERFEFWKKQLNRCKRCYSCRNACPVCTC
RVCLFDRENPDYLDKATDQLAQHQFYHVIRAFHVSDRCVGCGECSRVCPENIPLHLLNQKLVKELENYYGEYTPGIDELP
APLSQANADDPDPFEKEEK

Sequences:

>Translated_339_residues
MQKITAELRKIAKNLLSSGQVDMVLGYTQGELPYQTVPFVASSEEDVENLVFDGFSDKALSKYLLEDNFQSKKIALVLKG
CDSRALKLMLEESRVNRDNLYLIGVNCPGIIRRDALAKQAGCDLSQVDVVLQEDKITINTTNGSNCATSSQEVSYQQVVS
PFCLTCEHPTPSKDQVDTLIEEGEPKAFLDNQTYSHEESFTNIGELEKLSEEERFEFWKKQLNRCKRCYSCRNACPVCTC
RVCLFDRENPDYLDKATDQLAQHQFYHVIRAFHVSDRCVGCGECSRVCPENIPLHLLNQKLVKELENYYGEYTPGIDELP
APLSQANADDPDPFEKEEK
>Mature_339_residues
MQKITAELRKIAKNLLSSGQVDMVLGYTQGELPYQTVPFVASSEEDVENLVFDGFSDKALSKYLLEDNFQSKKIALVLKG
CDSRALKLMLEESRVNRDNLYLIGVNCPGIIRRDALAKQAGCDLSQVDVVLQEDKITINTTNGSNCATSSQEVSYQQVVS
PFCLTCEHPTPSKDQVDTLIEEGEPKAFLDNQTYSHEESFTNIGELEKLSEEERFEFWKKQLNRCKRCYSCRNACPVCTC
RVCLFDRENPDYLDKATDQLAQHQFYHVIRAFHVSDRCVGCGECSRVCPENIPLHLLNQKLVKELENYYGEYTPGIDELP
APLSQANADDPDPFEKEEK

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 38396; Mature: 38396

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKITAELRKIAKNLLSSGQVDMVLGYTQGELPYQTVPFVASSEEDVENLVFDGFSDKAL
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
SKYLLEDNFQSKKIALVLKGCDSRALKLMLEESRVNRDNLYLIGVNCPGIIRRDALAKQA
HHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
GCDLSQVDVVLQEDKITINTTNGSNCATSSQEVSYQQVVSPFCLTCEHPTPSKDQVDTLI
CCCHHHHHEEEECCEEEEEECCCCCCCCCHHHHHHHHHHCCHHEECCCCCCCHHHHHHHH
EEGEPKAFLDNQTYSHEESFTNIGELEKLSEEERFEFWKKQLNRCKRCYSCRNACPVCTC
HCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
RVCLFDRENPDYLDKATDQLAQHQFYHVIRAFHVSDRCVGCGECSRVCPENIPLHLLNQK
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHH
LVKELENYYGEYTPGIDELPAPLSQANADDPDPFEKEEK
HHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKITAELRKIAKNLLSSGQVDMVLGYTQGELPYQTVPFVASSEEDVENLVFDGFSDKAL
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
SKYLLEDNFQSKKIALVLKGCDSRALKLMLEESRVNRDNLYLIGVNCPGIIRRDALAKQA
HHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
GCDLSQVDVVLQEDKITINTTNGSNCATSSQEVSYQQVVSPFCLTCEHPTPSKDQVDTLI
CCCHHHHHEEEECCEEEEEECCCCCCCCCHHHHHHHHHHCCHHEECCCCCCCHHHHHHHH
EEGEPKAFLDNQTYSHEESFTNIGELEKLSEEERFEFWKKQLNRCKRCYSCRNACPVCTC
HCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
RVCLFDRENPDYLDKATDQLAQHQFYHVIRAFHVSDRCVGCGECSRVCPENIPLHLLNQK
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHH
LVKELENYYGEYTPGIDELPAPLSQANADDPDPFEKEEK
HHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]