Click here to switch to the map view.

The map label for this gene is 188587225

Identifier: 188587225

GI number: 188587225

Start: 2822709

End: 2824766

Strand: Reverse

Name: 188587225

Synonym: Nther_2627

Alternate gene names: NA

Gene position: 2824766-2822709 (Counterclockwise)

Preceding gene: 188587226

Following gene: 188587224

Centisome position: 89.23

GC content: 39.41

Gene sequence:

>2058_bases
TTGAAAAAGATTGTATCAATATGCGCTTTTTTAATTTCAGTAACTCTTTTTGTATCACCTAGCTTAGTTTGGGCACAGGA
GGGGGATGATGACATTCCTAGTCCAGTCTTAATGATCGAAGACGTGGAACCTGGGAGTGCTATAGCAGGTGAAAGTTTTT
ATATTAAGCTAGTTATAAAAAACGAAGGAGAACATAAAGCAAGAAACGTATTTGCGGAGGTTGATTCACCAGGAACTACA
AGAACTTATTTTACTCGTGACTCTCAACCTGACCACGACGAACCAGATCTGAATGAGATTGGACCAGGAGAAACAAGAAG
CCTTACTATTCCAGTAGCAGTAAGTGAAGATGCAGAATCAAAGAGCTATCAACTTTCCATTAACTTAAAAAGTCAAAATG
TCCTTTTTGAATCCAGTTCAAGTGGTTCAGCTACTTTGACAATTGATGTAGGATATGAAAATCTCAAACCAGTTATAGAT
ATGGAAGATGTGATTATAGAACCTGATGCACCACAAATAGGTGAGGATTTTCAGACAACTATAAAGCTAAAAAACAAGGG
TGCTGTGGATGCAAATAACTTGAATATTGAACTTAATGAACTGGAGAACTTTAACCTTGTTGATGTAAGCAATAGACGTT
TAGTTGAAACGTTAGAAAGTGGTGACCAAGAACAAATCACTTTTCAATTAAAACCAAAGGAAGATAGAGAAAGCAATCGT
ATAGAATTAGACATTGCTTATGATCAAAGACACGAAACAGGAGAAAGTTCTGAAACCTTATCAGTAAATCTTCCTTTAGA
AACTCCCGAAGCAGAGTCTCTCCCAGTTTTAACGGTGGATTCTTTTGAAATAGAAGATGGAACAGAAGAAGGAGAGTATA
AAGGATTAGTAACAGTAGAAAACCTGGGAGAACAAGAAGCCCAGGACATCAGAATATCTCTAACAGGAGATCATGTTAGA
ACTATTGGAACATCCAATGTAAAAAATATTTTATCACTAGAGGGAGAAGAGGAAAAAGAGCTTGAATATGAACTAGGTAT
TACTCCGCCTTCAGATAACGAGGTATTAGATCTACAAGTGGAGATGGAATACCAGGACGCTTATGGAAATGACCGTCCAA
AAGCCTCGGAGCAAATAGGGATAGCTAAAACTGAAGTGGATGAAGGCCTAGTGACAGATGGTGAACCAAAAGTACTTATT
AGTGAATATACTTTGGATCCTAGAGAAATTCAGGCCGGGAATGAATTTTCATTATCTTTATTAATTGAAAATACCCATGA
CAGACCTATACAAAATATTAAAGCTTCCATTAATCCTCCAGATATTGGGGAAGAAGGCGGAAGCGGTGGAACTGTCTTTT
CCCCTGTACAGGGAAGTAATAGCTTTTATATTCGTAATATTCAAGGTAGATCCCATGTTGAGCAAGAAATCGGGTTATAT
GTAGACCCGGGGGCCGAAGCTCGTACCTACACTGTACCTGTCGAACTAGAATATGAGGACCAAAACGCCGAGTCATACAC
GGAAACGGAGTATGTTAACATTTCTGTTACTCAAGAAAGCCGTTTTGATGTATTGTCAGTAGAAACGCCTCCAACTGCCC
ACGTGGGAGAGCCGGCAACTATCAATGCAGAATTTGTCAACTCAGGTAAAGTAGATCTAAGTAATTTCACAGTAACGCTG
GAAGGAGACTTTCCCAAAGAGCAAGCATCATATTATGTAGGTAACTTAGAACAGGATACTAGTGACTTTTACCAAGGAAC
TATTATACCCGATGAAGAGGGGATCTTAGAAGGTGAGCTTGTATTTTCATATCTTGACCATCGAAATGAAGAGGTGGAAA
TTACTGAAGAATTTGAGATGGCGGTAGAACCACCACCGGAACCGCCAGAAGATATGAAAGAAAAACCCCCAAGACCCGAC
GAAAAAGGTGGCAGTATGGACTCTTTCTGGAGTCCTATGGTAATCATACCACTACTAGCGGTCATCGGTGTTGTAGCGTT
TTTTGTATATCGCCGAGGACGTAGAAAAAAGGAAGAAGAGGAGATGCTGGATGCGTAA

Upstream 100 bases:

>100_bases
TATTTATAGTAATTAGAGGTTTTTAAATGAAGGAATTTTAATAGAATTTATCTATTTAATTTAAATATCTAATCTCAAAA
AAGGGAAGGGGAGTATTTTC

Downstream 100 bases:

>100_bases
GGCAGATCTGCTCATTTTAGCCAATAAAAATCTTTGGAGACGTAAAGTGCGTACCATATTGACCTGTATGGGGGTGGTCA
TTGGGACTGCATCTATTGTG

Product: S-layer domain-like protein

Products: NA

Alternate protein names: S-Layer Domain Protein; S-Layer Domain-Like Protein; S-Layer Protein

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MKKIVSICAFLISVTLFVSPSLVWAQEGDDDIPSPVLMIEDVEPGSAIAGESFYIKLVIKNEGEHKARNVFAEVDSPGTT
RTYFTRDSQPDHDEPDLNEIGPGETRSLTIPVAVSEDAESKSYQLSINLKSQNVLFESSSSGSATLTIDVGYENLKPVID
MEDVIIEPDAPQIGEDFQTTIKLKNKGAVDANNLNIELNELENFNLVDVSNRRLVETLESGDQEQITFQLKPKEDRESNR
IELDIAYDQRHETGESSETLSVNLPLETPEAESLPVLTVDSFEIEDGTEEGEYKGLVTVENLGEQEAQDIRISLTGDHVR
TIGTSNVKNILSLEGEEEKELEYELGITPPSDNEVLDLQVEMEYQDAYGNDRPKASEQIGIAKTEVDEGLVTDGEPKVLI
SEYTLDPREIQAGNEFSLSLLIENTHDRPIQNIKASINPPDIGEEGGSGGTVFSPVQGSNSFYIRNIQGRSHVEQEIGLY
VDPGAEARTYTVPVELEYEDQNAESYTETEYVNISVTQESRFDVLSVETPPTAHVGEPATINAEFVNSGKVDLSNFTVTL
EGDFPKEQASYYVGNLEQDTSDFYQGTIIPDEEGILEGELVFSYLDHRNEEVEITEEFEMAVEPPPEPPEDMKEKPPRPD
EKGGSMDSFWSPMVIIPLLAVIGVVAFFVYRRGRRKKEEEEMLDA

Sequences:

>Translated_685_residues
MKKIVSICAFLISVTLFVSPSLVWAQEGDDDIPSPVLMIEDVEPGSAIAGESFYIKLVIKNEGEHKARNVFAEVDSPGTT
RTYFTRDSQPDHDEPDLNEIGPGETRSLTIPVAVSEDAESKSYQLSINLKSQNVLFESSSSGSATLTIDVGYENLKPVID
MEDVIIEPDAPQIGEDFQTTIKLKNKGAVDANNLNIELNELENFNLVDVSNRRLVETLESGDQEQITFQLKPKEDRESNR
IELDIAYDQRHETGESSETLSVNLPLETPEAESLPVLTVDSFEIEDGTEEGEYKGLVTVENLGEQEAQDIRISLTGDHVR
TIGTSNVKNILSLEGEEEKELEYELGITPPSDNEVLDLQVEMEYQDAYGNDRPKASEQIGIAKTEVDEGLVTDGEPKVLI
SEYTLDPREIQAGNEFSLSLLIENTHDRPIQNIKASINPPDIGEEGGSGGTVFSPVQGSNSFYIRNIQGRSHVEQEIGLY
VDPGAEARTYTVPVELEYEDQNAESYTETEYVNISVTQESRFDVLSVETPPTAHVGEPATINAEFVNSGKVDLSNFTVTL
EGDFPKEQASYYVGNLEQDTSDFYQGTIIPDEEGILEGELVFSYLDHRNEEVEITEEFEMAVEPPPEPPEDMKEKPPRPD
EKGGSMDSFWSPMVIIPLLAVIGVVAFFVYRRGRRKKEEEEMLDA
>Mature_685_residues
MKKIVSICAFLISVTLFVSPSLVWAQEGDDDIPSPVLMIEDVEPGSAIAGESFYIKLVIKNEGEHKARNVFAEVDSPGTT
RTYFTRDSQPDHDEPDLNEIGPGETRSLTIPVAVSEDAESKSYQLSINLKSQNVLFESSSSGSATLTIDVGYENLKPVID
MEDVIIEPDAPQIGEDFQTTIKLKNKGAVDANNLNIELNELENFNLVDVSNRRLVETLESGDQEQITFQLKPKEDRESNR
IELDIAYDQRHETGESSETLSVNLPLETPEAESLPVLTVDSFEIEDGTEEGEYKGLVTVENLGEQEAQDIRISLTGDHVR
TIGTSNVKNILSLEGEEEKELEYELGITPPSDNEVLDLQVEMEYQDAYGNDRPKASEQIGIAKTEVDEGLVTDGEPKVLI
SEYTLDPREIQAGNEFSLSLLIENTHDRPIQNIKASINPPDIGEEGGSGGTVFSPVQGSNSFYIRNIQGRSHVEQEIGLY
VDPGAEARTYTVPVELEYEDQNAESYTETEYVNISVTQESRFDVLSVETPPTAHVGEPATINAEFVNSGKVDLSNFTVTL
EGDFPKEQASYYVGNLEQDTSDFYQGTIIPDEEGILEGELVFSYLDHRNEEVEITEEFEMAVEPPPEPPEDMKEKPPRPD
EKGGSMDSFWSPMVIIPLLAVIGVVAFFVYRRGRRKKEEEEMLDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76088; Mature: 76088

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVSICAFLISVTLFVSPSLVWAQEGDDDIPSPVLMIEDVEPGSAIAGESFYIKLVIK
CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEE
NEGEHKARNVFAEVDSPGTTRTYFTRDSQPDHDEPDLNEIGPGETRSLTIPVAVSEDAES
CCCCCCHHEEEEECCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCC
KSYQLSINLKSQNVLFESSSSGSATLTIDVGYENLKPVIDMEDVIIEPDAPQIGEDFQTT
CEEEEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCEECCCCEEECCCCCCCCCCCEEE
IKLKNKGAVDANNLNIELNELENFNLVDVSNRRLVETLESGDQEQITFQLKPKEDRESNR
EEECCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCE
IELDIAYDQRHETGESSETLSVNLPLETPEAESLPVLTVDSFEIEDGTEEGEYKGLVTVE
EEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECEEECCCCCCCCEEEEEEEC
NLGEQEAQDIRISLTGDHVRTIGTSNVKNILSLEGEEEKELEYELGITPPSDNEVLDLQV
CCCCCCCCEEEEEEECCEEEECCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEE
EMEYQDAYGNDRPKASEQIGIAKTEVDEGLVTDGEPKVLISEYTLDPREIQAGNEFSLSL
EEEEECCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEE
LIENTHDRPIQNIKASINPPDIGEEGGSGGTVFSPVQGSNSFYIRNIQGRSHVEQEIGLY
EEECCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHCCEE
VDPGAEARTYTVPVELEYEDQNAESYTETEYVNISVTQESRFDVLSVETPPTAHVGEPAT
ECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCE
INAEFVNSGKVDLSNFTVTLEGDFPKEQASYYVGNLEQDTSDFYQGTIIPDEEGILEGEL
EEEEEECCCCEEEEEEEEEEECCCCHHHHHEEECCCCCCCHHHHCCEECCCCCCCCCHHH
VFSYLDHRNEEVEITEEFEMAVEPPPEPPEDMKEKPPRPDEKGGSMDSFWSPMVIIPLLA
HHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHH
VIGVVAFFVYRRGRRKKEEEEMLDA
HHHHHHHHHHHHCCCCCCHHHHHCC
>Mature Secondary Structure
MKKIVSICAFLISVTLFVSPSLVWAQEGDDDIPSPVLMIEDVEPGSAIAGESFYIKLVIK
CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEE
NEGEHKARNVFAEVDSPGTTRTYFTRDSQPDHDEPDLNEIGPGETRSLTIPVAVSEDAES
CCCCCCHHEEEEECCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCC
KSYQLSINLKSQNVLFESSSSGSATLTIDVGYENLKPVIDMEDVIIEPDAPQIGEDFQTT
CEEEEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCEECCCCEEECCCCCCCCCCCEEE
IKLKNKGAVDANNLNIELNELENFNLVDVSNRRLVETLESGDQEQITFQLKPKEDRESNR
EEECCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCE
IELDIAYDQRHETGESSETLSVNLPLETPEAESLPVLTVDSFEIEDGTEEGEYKGLVTVE
EEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECEEECCCCCCCCEEEEEEEC
NLGEQEAQDIRISLTGDHVRTIGTSNVKNILSLEGEEEKELEYELGITPPSDNEVLDLQV
CCCCCCCCEEEEEEECCEEEECCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEE
EMEYQDAYGNDRPKASEQIGIAKTEVDEGLVTDGEPKVLISEYTLDPREIQAGNEFSLSL
EEEEECCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEE
LIENTHDRPIQNIKASINPPDIGEEGGSGGTVFSPVQGSNSFYIRNIQGRSHVEQEIGLY
EEECCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHCCEE
VDPGAEARTYTVPVELEYEDQNAESYTETEYVNISVTQESRFDVLSVETPPTAHVGEPAT
ECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCE
INAEFVNSGKVDLSNFTVTLEGDFPKEQASYYVGNLEQDTSDFYQGTIIPDEEGILEGEL
EEEEEECCCCEEEEEEEEEEECCCCHHHHHEEECCCCCCCHHHHCCEECCCCCCCCCHHH
VFSYLDHRNEEVEITEEFEMAVEPPPEPPEDMKEKPPRPDEKGGSMDSFWSPMVIIPLLA
HHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHH
VIGVVAFFVYRRGRRKKEEEEMLDA
HHHHHHHHHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA