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The map label for this gene is ytrF [H]

Identifier: 188587224

GI number: 188587224

Start: 2821313

End: 2822716

Strand: Reverse

Name: ytrF [H]

Synonym: Nther_2626

Alternate gene names: 188587224

Gene position: 2822716-2821313 (Counterclockwise)

Preceding gene: 188587225

Following gene: 188587222

Centisome position: 89.17

GC content: 45.8

Gene sequence:

>1404_bases
ATGCGTAAGGCAGATCTGCTCATTTTAGCCAATAAAAATCTTTGGAGACGTAAAGTGCGTACCATATTGACCTGTATGGG
GGTGGTCATTGGGACTGCATCTATTGTGGTTATGATTTCCCTGGGAATAGGTCTTCAAGCCAGTATGGAAGAAAGTATGG
CACGCTGGGGTGATCTTAATATTATTCAGGTCAATCCAGGTATGCATCATGATCCGGAAAATCCCGAAGCTGCAGAAAGC
ACATCTCAAGAAGAAGTGGGGCTTGACGAAGAAGCTGTGGAAAAATTTAAATCCATGCCGGGAGTTAGTGCAGTTTCACC
CACCTATGAAGTTAGGGGTGAAGCTCAGATGGGCAGGGAAGAAGGACATTTTCGCATGGTTGGAGTCGACGTTGAAACCA
TGGAAGAACTGGAGTTCAGCTTACAAGATGGTCGGCTTCCTCGAGCGGAGGAAAGTTATACCGTCGTGGCTGGTCCCCAG
GTAATTAATACTTTTCGCGATCCCAGGGTAGAGCAAGGACCTGGAGCCCCTGGTTCAACTGGTGGCCATGAAGAACGTGA
GCCAACTGAACTATTAGAAGAAAGTGTTCAGGTTACATTCCACAATCGGGCTGACCGTGAAAGGCAGCAAAGGCACAACT
TTTTTGTTGTTGGAATTTTAGATGACGAGAGTATGCAGAGATCCTCACAAGTATATGCCTCTTTAGAAGATATAGATCGG
ATTCGAGACTTTGTTTATGAAGGGATTGAGGATGCCCGGCAGGAAACAGCTGCTATGGGGGGGCAAGGCGCCGCTCAGCA
GCAAAGCAGGCAGCAGCGAGACCAGGAAAAAGAATATGATTCGATAAAAATTAGAGCCGACAGTATAGAAAGTGCCCGGG
AACTATCAGATAATTTGCGGGATATGGGATACAATGCTTATTCCGCTTCAGATGCCCTGGAAGGAGTGGAAAACACCTCA
CGTACTATTCAAGCTATTTTGGGAGGAATTGGAGGAATCACACTCCTAGTTGCAGCCTTGAGTATTACCAATACTATGGT
CATGTCAATTTACGAGCGGACCAAGGAAATTGGAGTAATAAAAGTTATTGGGGCTTCTGCTTCTGATATTAGGGCTATGT
TCCTTACAGAAGCTTCTCTGATAGGTTTTTTTGGTGGAGTGATTGGCCTGGCTGTAAGTTACGGTGCATCCCATTTGCTA
AATCAGTTTGCCGGAAGATTTGTTGAAGGGGGAATCATGCCTGTTGCCGACCCGGCTGCTGAATCAGTGCAGATCTCCAT
TATCCCAGTCTGGTTAGCTTTATTTGCTCTAGGGTTTGCAATATTAATAGGATTGATTTCCGGCCTTTATCCGGCCATGA
GAGCCATTAAGCTCAGCCCTATAGTGGCAATTCGTAATGAATAA

Upstream 100 bases:

>100_bases
AGTCCTATGGTAATCATACCACTACTAGCGGTCATCGGTGTTGTAGCGTTTTTTGTATATCGCCGAGGACGTAGAAAAAA
GGAAGAAGAGGAGATGCTGG

Downstream 100 bases:

>100_bases
AGCTGGATTTCTGTATCATTTAGTAAAATAATAAGATTGGTAGAGTAGGAAATAAAAAGCCTAGACCCGGGTATGCTATT
AACTGAACGTGTCCCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRKADLLILANKNLWRRKVRTILTCMGVVIGTASIVVMISLGIGLQASMEESMARWGDLNIIQVNPGMHHDPENPEAAES
TSQEEVGLDEEAVEKFKSMPGVSAVSPTYEVRGEAQMGREEGHFRMVGVDVETMEELEFSLQDGRLPRAEESYTVVAGPQ
VINTFRDPRVEQGPGAPGSTGGHEEREPTELLEESVQVTFHNRADRERQQRHNFFVVGILDDESMQRSSQVYASLEDIDR
IRDFVYEGIEDARQETAAMGGQGAAQQQSRQQRDQEKEYDSIKIRADSIESARELSDNLRDMGYNAYSASDALEGVENTS
RTIQAILGGIGGITLLVAALSITNTMVMSIYERTKEIGVIKVIGASASDIRAMFLTEASLIGFFGGVIGLAVSYGASHLL
NQFAGRFVEGGIMPVADPAAESVQISIIPVWLALFALGFAILIGLISGLYPAMRAIKLSPIVAIRNE

Sequences:

>Translated_467_residues
MRKADLLILANKNLWRRKVRTILTCMGVVIGTASIVVMISLGIGLQASMEESMARWGDLNIIQVNPGMHHDPENPEAAES
TSQEEVGLDEEAVEKFKSMPGVSAVSPTYEVRGEAQMGREEGHFRMVGVDVETMEELEFSLQDGRLPRAEESYTVVAGPQ
VINTFRDPRVEQGPGAPGSTGGHEEREPTELLEESVQVTFHNRADRERQQRHNFFVVGILDDESMQRSSQVYASLEDIDR
IRDFVYEGIEDARQETAAMGGQGAAQQQSRQQRDQEKEYDSIKIRADSIESARELSDNLRDMGYNAYSASDALEGVENTS
RTIQAILGGIGGITLLVAALSITNTMVMSIYERTKEIGVIKVIGASASDIRAMFLTEASLIGFFGGVIGLAVSYGASHLL
NQFAGRFVEGGIMPVADPAAESVQISIIPVWLALFALGFAILIGLISGLYPAMRAIKLSPIVAIRNE
>Mature_467_residues
MRKADLLILANKNLWRRKVRTILTCMGVVIGTASIVVMISLGIGLQASMEESMARWGDLNIIQVNPGMHHDPENPEAAES
TSQEEVGLDEEAVEKFKSMPGVSAVSPTYEVRGEAQMGREEGHFRMVGVDVETMEELEFSLQDGRLPRAEESYTVVAGPQ
VINTFRDPRVEQGPGAPGSTGGHEEREPTELLEESVQVTFHNRADRERQQRHNFFVVGILDDESMQRSSQVYASLEDIDR
IRDFVYEGIEDARQETAAMGGQGAAQQQSRQQRDQEKEYDSIKIRADSIESARELSDNLRDMGYNAYSASDALEGVENTS
RTIQAILGGIGGITLLVAALSITNTMVMSIYERTKEIGVIKVIGASASDIRAMFLTEASLIGFFGGVIGLAVSYGASHLL
NQFAGRFVEGGIMPVADPAAESVQISIIPVWLALFALGFAILIGLISGLYPAMRAIKLSPIVAIRNE

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=196, Percent_Identity=30.1020408163265, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 51028; Mature: 51028

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKADLLILANKNLWRRKVRTILTCMGVVIGTASIVVMISLGIGLQASMEESMARWGDLN
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCE
IIQVNPGMHHDPENPEAAESTSQEEVGLDEEAVEKFKSMPGVSAVSPTYEVRGEAQMGRE
EEEECCCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCCCHHCCCC
EGHFRMVGVDVETMEELEFSLQDGRLPRAEESYTVVAGPQVINTFRDPRVEQGPGAPGST
CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCC
GGHEEREPTELLEESVQVTFHNRADRERQQRHNFFVVGILDDESMQRSSQVYASLEDIDR
CCCCCCCHHHHHHHHHHEEECCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHH
IRDFVYEGIEDARQETAAMGGQGAAQQQSRQQRDQEKEYDSIKIRADSIESARELSDNLR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
DMGYNAYSASDALEGVENTSRTIQAILGGIGGITLLVAALSITNTMVMSIYERTKEIGVI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
KVIGASASDIRAMFLTEASLIGFFGGVIGLAVSYGASHLLNQFAGRFVEGGIMPVADPAA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ESVQISIIPVWLALFALGFAILIGLISGLYPAMRAIKLSPIVAIRNE
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
>Mature Secondary Structure
MRKADLLILANKNLWRRKVRTILTCMGVVIGTASIVVMISLGIGLQASMEESMARWGDLN
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCE
IIQVNPGMHHDPENPEAAESTSQEEVGLDEEAVEKFKSMPGVSAVSPTYEVRGEAQMGRE
EEEECCCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCCCHHCCCC
EGHFRMVGVDVETMEELEFSLQDGRLPRAEESYTVVAGPQVINTFRDPRVEQGPGAPGST
CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCC
GGHEEREPTELLEESVQVTFHNRADRERQQRHNFFVVGILDDESMQRSSQVYASLEDIDR
CCCCCCCHHHHHHHHHHEEECCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHH
IRDFVYEGIEDARQETAAMGGQGAAQQQSRQQRDQEKEYDSIKIRADSIESARELSDNLR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
DMGYNAYSASDALEGVENTSRTIQAILGGIGGITLLVAALSITNTMVMSIYERTKEIGVI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
KVIGASASDIRAMFLTEASLIGFFGGVIGLAVSYGASHLLNQFAGRFVEGGIMPVADPAA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ESVQISIIPVWLALFALGFAILIGLISGLYPAMRAIKLSPIVAIRNE
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]