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The map label for this gene is fecD [C]

Identifier: 188587215

GI number: 188587215

Start: 2810027

End: 2811130

Strand: Reverse

Name: fecD [C]

Synonym: Nther_2616

Alternate gene names: 188587215

Gene position: 2811130-2810027 (Counterclockwise)

Preceding gene: 188587216

Following gene: 188587214

Centisome position: 88.8

GC content: 38.41

Gene sequence:

>1104_bases
ATGAGTAGAAATATTCAGCAACAAGAGATCCAAAACCCTGAACAGGCCTACATATCTTCAACAAACAAAAAGATCTTGGT
AATTTTGTGTTTAATCACTGTTTTATTTATTGTATCTCTATTAGCCCTTTCATACGGAGCTTCTTCCGTTGGCCCGGTAG
ATGCTTTTAATATTTTAACTTCACCAATCAGAAGTACAGATGCAGTAGCTGAAGTTTCAAATACAGAAAAAATCATAGTA
TTACAGCTGCGTTTACCTCGGGTCCTTTTGGCAGTGATGGCGGGATTTTCTTTGGCAGGAGCAGGCGTAGTGATGCAGGG
GATTTTAAGAAATCCACTGGTAAGTCCTTATACCTTGGGGCTTTCCAGTGGAGCTGCTTTTGGCGCTGCCTTAGCCATAG
TACTGCAGGTTGGAATTTTTGGAAGCGGGTTATCCAGTTATCATGAATTATTTATACCTGCTAATGCCTTTGTCTTCGCT
ATGTTGACCATGTTTTTTATTTATATCATTTCTAGTATGAAAGGGGCTACTTCCGAAACCTTGATTTTGGCAGGTGTAGC
CATAGGTTATTTCTTTTCAGCCCTGGTTTCAGCTTTAAAATATATCAGTGATTCCGATGAATTACCGGAACTGGTTTACT
GGTTAATGGGAAGTATTATTGGAGCTAACTGGACTAATATTATAATTATCTTTATCCCAATGGTGATTTCAATAGTGATT
TTATTACGTTATTCCTGGGATTTAAATGTTTTAGGTGGAGGAGAAGAAGTAGCCAAAAGTTTAGGTGTTGATGTCAAAAG
GATGAAGATAATTTGTCTGATATTTTCATCTTTGATTGCTGCTGTAGCTGTAGCTTTTACCGGTATTATTGGTTTTGTGG
GTCTGGTAGGTCCTCACATCAGCAGGATAATAGTAGGAGCTGATTATCGATTTTTACTGCCAACTTCTTGTTTCATGGGA
GCTTTGTTACTTTTATCAGCCGATACCCTGGCGAGAACTATGATTGCTCCGTCAGAAATACCTGTGGGAATAGTTACTTC
ATTACTTGGGGTTCCCTTCTTTTTATATCTACTATTAAAAAAGAGAAAGGTTTGGTGGCAGTGA

Upstream 100 bases:

>100_bases
TACCCAGAACAATTTAACGATGTTGAACCAAAAGAGATTCATAGGGAATTACTAGAAGAATATTACGGTTTAGAATATCA
AGGGGTGTGGGTATATCCCC

Downstream 100 bases:

>100_bases
AACTATCGGCAGAAGGAATCACATTTTCGTATGGAAGCAGAAGCGTTTTGGATGATGTAACCTTTCAGGTCCCAGAAGGA
CAAGTTACTAGCATAATAGG

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSRNIQQQEIQNPEQAYISSTNKKILVILCLITVLFIVSLLALSYGASSVGPVDAFNILTSPIRSTDAVAEVSNTEKIIV
LQLRLPRVLLAVMAGFSLAGAGVVMQGILRNPLVSPYTLGLSSGAAFGAALAIVLQVGIFGSGLSSYHELFIPANAFVFA
MLTMFFIYIISSMKGATSETLILAGVAIGYFFSALVSALKYISDSDELPELVYWLMGSIIGANWTNIIIIFIPMVISIVI
LLRYSWDLNVLGGGEEVAKSLGVDVKRMKIICLIFSSLIAAVAVAFTGIIGFVGLVGPHISRIIVGADYRFLLPTSCFMG
ALLLLSADTLARTMIAPSEIPVGIVTSLLGVPFFLYLLLKKRKVWWQ

Sequences:

>Translated_367_residues
MSRNIQQQEIQNPEQAYISSTNKKILVILCLITVLFIVSLLALSYGASSVGPVDAFNILTSPIRSTDAVAEVSNTEKIIV
LQLRLPRVLLAVMAGFSLAGAGVVMQGILRNPLVSPYTLGLSSGAAFGAALAIVLQVGIFGSGLSSYHELFIPANAFVFA
MLTMFFIYIISSMKGATSETLILAGVAIGYFFSALVSALKYISDSDELPELVYWLMGSIIGANWTNIIIIFIPMVISIVI
LLRYSWDLNVLGGGEEVAKSLGVDVKRMKIICLIFSSLIAAVAVAFTGIIGFVGLVGPHISRIIVGADYRFLLPTSCFMG
ALLLLSADTLARTMIAPSEIPVGIVTSLLGVPFFLYLLLKKRKVWWQ
>Mature_366_residues
SRNIQQQEIQNPEQAYISSTNKKILVILCLITVLFIVSLLALSYGASSVGPVDAFNILTSPIRSTDAVAEVSNTEKIIVL
QLRLPRVLLAVMAGFSLAGAGVVMQGILRNPLVSPYTLGLSSGAAFGAALAIVLQVGIFGSGLSSYHELFIPANAFVFAM
LTMFFIYIISSMKGATSETLILAGVAIGYFFSALVSALKYISDSDELPELVYWLMGSIIGANWTNIIIIFIPMVISIVIL
LRYSWDLNVLGGGEEVAKSLGVDVKRMKIICLIFSSLIAAVAVAFTGIIGFVGLVGPHISRIIVGADYRFLLPTSCFMGA
LLLLSADTLARTMIAPSEIPVGIVTSLLGVPFFLYLLLKKRKVWWQ

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=307, Percent_Identity=33.2247557003257, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788004, Length=292, Percent_Identity=35.958904109589, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790741, Length=310, Percent_Identity=31.2903225806452, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786805, Length=292, Percent_Identity=34.9315068493151, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786347, Length=292, Percent_Identity=31.8493150684932, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786804, Length=346, Percent_Identity=28.6127167630058, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 39481; Mature: 39350

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNIQQQEIQNPEQAYISSTNKKILVILCLITVLFIVSLLALSYGASSVGPVDAFNILT
CCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SPIRSTDAVAEVSNTEKIIVLQLRLPRVLLAVMAGFSLAGAGVVMQGILRNPLVSPYTLG
HCCCCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEC
LSSGAAFGAALAIVLQVGIFGSGLSSYHELFIPANAFVFAMLTMFFIYIISSMKGATSET
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LILAGVAIGYFFSALVSALKYISDSDELPELVYWLMGSIIGANWTNIIIIFIPMVISIVI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LLRYSWDLNVLGGGEEVAKSLGVDVKRMKIICLIFSSLIAAVAVAFTGIIGFVGLVGPHI
HHHHCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIIVGADYRFLLPTSCFMGALLLLSADTLARTMIAPSEIPVGIVTSLLGVPFFLYLLLK
HHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KRKVWWQ
HHHHCCC
>Mature Secondary Structure 
SRNIQQQEIQNPEQAYISSTNKKILVILCLITVLFIVSLLALSYGASSVGPVDAFNILT
CCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SPIRSTDAVAEVSNTEKIIVLQLRLPRVLLAVMAGFSLAGAGVVMQGILRNPLVSPYTLG
HCCCCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEC
LSSGAAFGAALAIVLQVGIFGSGLSSYHELFIPANAFVFAMLTMFFIYIISSMKGATSET
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LILAGVAIGYFFSALVSALKYISDSDELPELVYWLMGSIIGANWTNIIIIFIPMVISIVI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LLRYSWDLNVLGGGEEVAKSLGVDVKRMKIICLIFSSLIAAVAVAFTGIIGFVGLVGPHI
HHHHCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIIVGADYRFLLPTSCFMGALLLLSADTLARTMIAPSEIPVGIVTSLLGVPFFLYLLLK
HHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KRKVWWQ
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]