| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587114
Identifier: 188587114
GI number: 188587114
Start: 2703846
End: 2704754
Strand: Reverse
Name: 188587114
Synonym: Nther_2508
Alternate gene names: NA
Gene position: 2704754-2703846 (Counterclockwise)
Preceding gene: 188587115
Following gene: 188587113
Centisome position: 85.44
GC content: 31.02
Gene sequence:
>909_bases TTGGATTTAAGTTTACTAATCTCAACAATAATAACTTCGACTGCTGCATTAGTTGCGATTATTGGCGGATTCTTGGTAAG CAGGGTTATTACATTATCCGGTGAAAAGAATTCAATTCAGAAGAAAATAAGGGAAATTGATAAAGAATTAAATATAAAAA AAGAGATGCTTGAATCTGCAAAGCAGGTAGTGGAAGAAGAGGATATTGATGATTTTGTTCAACATTATGCAGAAGATATA CTTTTCAACAAAAAATCGTTGGAGGACATTTTAGAAGAAGAGCAGAGTATTAATTTAAATAGAGACGTGATTGAATCTAC CATAGATAGAATTTTAGAAATCTCTCAATTCATTAAGGATAAAATTAAGTCTACAGATGACAATTATGTACTTCCAACTG ATTTTAATGAGTTTATTCGTGATAATAAAATCAAAATTGATGAAGATAGAGACAGAAGCTGGTATGAGTTAATATATGAT ATAATTTTACGTCATATACCCCAAAAACAACCGGGCATTTTAAATGTTGACGTCCTTAGTTCTATTTCTGACATTGGTTA TTTCAAGCCGATACTTTCCTCTCAAGAATATAATGCCAATGTTCGAAAAGTGAAACAACTTGAAGAAGACATTAAAGTAC TAGAAGCATTAATGAATGCAGAACAAGATATGCTAATGGGTTATGGAAAAATTTCTGGATTATGGGGTGGACTGGCAGTA CTTATATACGCTTGCATAGTTGGGATAATAATTCCAAGTTTCTTATTACCATATCCGATAGGATATTATGATGATTCGGC TATTAGAATATTATTGATAGCGTTATTTATAAGTGAATTAGTAGTGCTATTTTCGTATTTAGGATTTTCAATGTATAGGT TAACTAAGAAGGACGATATGATTGAATGA
Upstream 100 bases:
>100_bases GTGTTAAGCTACTATAGGTATGGTGGTTATGTGGGAGAGTAATGGGTGACGATGGAAAATCATATTGGCCCGGGTAAGTG AGTATTCAGAGGTGATATCA
Downstream 100 bases:
>100_bases ACGAAATTTGTAAAATAAGGATTAAGAATTTGAAATAAATATTTTATTGGGGTGAAGTAATGAATAGTAGGGCGAGGATT AAATTGGTGGCATTAGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MDLSLLISTIITSTAALVAIIGGFLVSRVITLSGEKNSIQKKIREIDKELNIKKEMLESAKQVVEEEDIDDFVQHYAEDI LFNKKSLEDILEEEQSINLNRDVIESTIDRILEISQFIKDKIKSTDDNYVLPTDFNEFIRDNKIKIDEDRDRSWYELIYD IILRHIPQKQPGILNVDVLSSISDIGYFKPILSSQEYNANVRKVKQLEEDIKVLEALMNAEQDMLMGYGKISGLWGGLAV LIYACIVGIIIPSFLLPYPIGYYDDSAIRILLIALFISELVVLFSYLGFSMYRLTKKDDMIE
Sequences:
>Translated_302_residues MDLSLLISTIITSTAALVAIIGGFLVSRVITLSGEKNSIQKKIREIDKELNIKKEMLESAKQVVEEEDIDDFVQHYAEDI LFNKKSLEDILEEEQSINLNRDVIESTIDRILEISQFIKDKIKSTDDNYVLPTDFNEFIRDNKIKIDEDRDRSWYELIYD IILRHIPQKQPGILNVDVLSSISDIGYFKPILSSQEYNANVRKVKQLEEDIKVLEALMNAEQDMLMGYGKISGLWGGLAV LIYACIVGIIIPSFLLPYPIGYYDDSAIRILLIALFISELVVLFSYLGFSMYRLTKKDDMIE >Mature_302_residues MDLSLLISTIITSTAALVAIIGGFLVSRVITLSGEKNSIQKKIREIDKELNIKKEMLESAKQVVEEEDIDDFVQHYAEDI LFNKKSLEDILEEEQSINLNRDVIESTIDRILEISQFIKDKIKSTDDNYVLPTDFNEFIRDNKIKIDEDRDRSWYELIYD IILRHIPQKQPGILNVDVLSSISDIGYFKPILSSQEYNANVRKVKQLEEDIKVLEALMNAEQDMLMGYGKISGLWGGLAV LIYACIVGIIIPSFLLPYPIGYYDDSAIRILLIALFISELVVLFSYLGFSMYRLTKKDDMIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34634; Mature: 34634
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSLLISTIITSTAALVAIIGGFLVSRVITLSGEKNSIQKKIREIDKELNIKKEMLESA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHH KQVVEEEDIDDFVQHYAEDILFNKKSLEDILEEEQSINLNRDVIESTIDRILEISQFIKD HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KIKSTDDNYVLPTDFNEFIRDNKIKIDEDRDRSWYELIYDIILRHIPQKQPGILNVDVLS HHCCCCCCEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHH SISDIGYFKPILSSQEYNANVRKVKQLEEDIKVLEALMNAEQDMLMGYGKISGLWGGLAV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LIYACIVGIIIPSFLLPYPIGYYDDSAIRILLIALFISELVVLFSYLGFSMYRLTKKDDM HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IE CC >Mature Secondary Structure MDLSLLISTIITSTAALVAIIGGFLVSRVITLSGEKNSIQKKIREIDKELNIKKEMLESA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHH KQVVEEEDIDDFVQHYAEDILFNKKSLEDILEEEQSINLNRDVIESTIDRILEISQFIKD HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KIKSTDDNYVLPTDFNEFIRDNKIKIDEDRDRSWYELIYDIILRHIPQKQPGILNVDVLS HHCCCCCCEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHH SISDIGYFKPILSSQEYNANVRKVKQLEEDIKVLEALMNAEQDMLMGYGKISGLWGGLAV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LIYACIVGIIIPSFLLPYPIGYYDDSAIRILLIALFISELVVLFSYLGFSMYRLTKKDDM HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA