Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188587115

Identifier: 188587115

GI number: 188587115

Start: 2705259

End: 2706251

Strand: Reverse

Name: 188587115

Synonym: Nther_2509

Alternate gene names: NA

Gene position: 2706251-2705259 (Counterclockwise)

Preceding gene: 188587117

Following gene: 188587114

Centisome position: 85.49

GC content: 29.51

Gene sequence:

>993_bases
ATGGATCGAAATCAAGAATTGGAATATAGAGGTAAACTAAGAAAGATTATGAATAGATACTTAGATAAATCACGAAAGTT
TTGTGAAAAATACAGCGTTCCTGATGGATTATTAGATATAATGACATTTGTTTATACCGATAACAATATCCCTTCTGAAT
TATTATATAGTGCTAAACTGTTTAATGACTTTGATTACTTCGTGTTTTCTAAAAGTACAAAAACACTACATGCAATCAGA
GCACTATTGAATGAGCAAGATTATCATTTTGATGAAGATATAATGATGCTGGTAAGAAGTATCTTTGAAGGCCATTTATT
TAGTAGATATTTTAGAGATAAAATTGATGACGATCAAAATAGAGAAGAACTGATAGAAGAATTCATAAGAAGCCCTATAG
GGGTGATTACAGACTACTTTTCACTGAAAAGAAATAAAGTAATAGATCAAAACAGTAACTTAGTCGCAGAGAGGAAAGGA
CCTAGTAAAGTAAAGCAGGGTAAAGATGAAAACTACTATTATTATTTTTACTCGTATTTATGTGAATTTACACACAGTAA
TTTTGGAACGATGAAGCATTATTTTAATGGTACACATTTCATCTATGATAAACAAAATCTCCTTTTAGAACCTGTTTTGT
TTTCTGTTTTTGCATTTACAAAAGTATTTGAAGGTATTGCGACTGTTCAAGGTGAGAACTTCGAAACATTTCACGTTGAA
AAAAGTTATTATGAATTAGTATATGATGCTTTAGACTTACAGGCTGAAATTTTTGATTACCTAATTGATAAATATAAAAA
CAGTGAACCGGATAAACTTGATTGGATTATTCAACTATATCTGTCAGAAGGAAATCCGAAAGGCAGAAATGATAAAATGG
TTAAAATGATGGGGAAAATGAAAAATTCATTGTATGAAGAAATTGGAAGTTTGAAGAAAAATAAACAGGATAACAATGGG
TATTTAATTAGACAATACCCTTATTGGGACTAA

Upstream 100 bases:

>100_bases
CCCTAGCTTCAAACTATACAAATAGGTTAAGACACTATTATTGAGGAATGTTTCCTGCTTGTATAAGTGATAATTTGGGG
GATGTAGGGAGAGTTTATAA

Downstream 100 bases:

>100_bases
AGTTATTAAAGAAGTACAATTATGCTATAGCTTGGGAAGTAAATGAAAGTCCAATAAAAAAGAATTATTTGCTTGAAAAA
AACCAAAGAATTTAATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MDRNQELEYRGKLRKIMNRYLDKSRKFCEKYSVPDGLLDIMTFVYTDNNIPSELLYSAKLFNDFDYFVFSKSTKTLHAIR
ALLNEQDYHFDEDIMMLVRSIFEGHLFSRYFRDKIDDDQNREELIEEFIRSPIGVITDYFSLKRNKVIDQNSNLVAERKG
PSKVKQGKDENYYYYFYSYLCEFTHSNFGTMKHYFNGTHFIYDKQNLLLEPVLFSVFAFTKVFEGIATVQGENFETFHVE
KSYYELVYDALDLQAEIFDYLIDKYKNSEPDKLDWIIQLYLSEGNPKGRNDKMVKMMGKMKNSLYEEIGSLKKNKQDNNG
YLIRQYPYWD

Sequences:

>Translated_330_residues
MDRNQELEYRGKLRKIMNRYLDKSRKFCEKYSVPDGLLDIMTFVYTDNNIPSELLYSAKLFNDFDYFVFSKSTKTLHAIR
ALLNEQDYHFDEDIMMLVRSIFEGHLFSRYFRDKIDDDQNREELIEEFIRSPIGVITDYFSLKRNKVIDQNSNLVAERKG
PSKVKQGKDENYYYYFYSYLCEFTHSNFGTMKHYFNGTHFIYDKQNLLLEPVLFSVFAFTKVFEGIATVQGENFETFHVE
KSYYELVYDALDLQAEIFDYLIDKYKNSEPDKLDWIIQLYLSEGNPKGRNDKMVKMMGKMKNSLYEEIGSLKKNKQDNNG
YLIRQYPYWD
>Mature_330_residues
MDRNQELEYRGKLRKIMNRYLDKSRKFCEKYSVPDGLLDIMTFVYTDNNIPSELLYSAKLFNDFDYFVFSKSTKTLHAIR
ALLNEQDYHFDEDIMMLVRSIFEGHLFSRYFRDKIDDDQNREELIEEFIRSPIGVITDYFSLKRNKVIDQNSNLVAERKG
PSKVKQGKDENYYYYFYSYLCEFTHSNFGTMKHYFNGTHFIYDKQNLLLEPVLFSVFAFTKVFEGIATVQGENFETFHVE
KSYYELVYDALDLQAEIFDYLIDKYKNSEPDKLDWIIQLYLSEGNPKGRNDKMVKMMGKMKNSLYEEIGSLKKNKQDNNG
YLIRQYPYWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39563; Mature: 39563

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNQELEYRGKLRKIMNRYLDKSRKFCEKYSVPDGLLDIMTFVYTDNNIPSELLYSAKL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
FNDFDYFVFSKSTKTLHAIRALLNEQDYHFDEDIMMLVRSIFEGHLFSRYFRDKIDDDQN
HCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
REELIEEFIRSPIGVITDYFSLKRNKVIDQNSNLVAERKGPSKVKQGKDENYYYYFYSYL
HHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCEEEHHHHHH
CEFTHSNFGTMKHYFNGTHFIYDKQNLLLEPVLFSVFAFTKVFEGIATVQGENFETFHVE
HHHHCCCCHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEH
KSYYELVYDALDLQAEIFDYLIDKYKNSEPDKLDWIIQLYLSEGNPKGRNDKMVKMMGKM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHH
KNSLYEEIGSLKKNKQDNNGYLIRQYPYWD
HHHHHHHHHHHHCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MDRNQELEYRGKLRKIMNRYLDKSRKFCEKYSVPDGLLDIMTFVYTDNNIPSELLYSAKL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
FNDFDYFVFSKSTKTLHAIRALLNEQDYHFDEDIMMLVRSIFEGHLFSRYFRDKIDDDQN
HCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
REELIEEFIRSPIGVITDYFSLKRNKVIDQNSNLVAERKGPSKVKQGKDENYYYYFYSYL
HHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCEEEHHHHHH
CEFTHSNFGTMKHYFNGTHFIYDKQNLLLEPVLFSVFAFTKVFEGIATVQGENFETFHVE
HHHHCCCCHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEH
KSYYELVYDALDLQAEIFDYLIDKYKNSEPDKLDWIIQLYLSEGNPKGRNDKMVKMMGKM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHH
KNSLYEEIGSLKKNKQDNNGYLIRQYPYWD
HHHHHHHHHHHHCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA