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The map label for this gene is 188587088

Identifier: 188587088

GI number: 188587088

Start: 2669858

End: 2670526

Strand: Reverse

Name: 188587088

Synonym: Nther_2482

Alternate gene names: NA

Gene position: 2670526-2669858 (Counterclockwise)

Preceding gene: 188587089

Following gene: 188587087

Centisome position: 84.36

GC content: 37.22

Gene sequence:

>669_bases
ATGAGTTATTGTCAAACATTGCGTGAATTAGGTAGTGACGTATGGGACGGTTGGCATGAGCACCCTTTCATTAAAGGAAT
AGGCAATGGGAACCTGGAAAGGGAAAAATTTATCTTTTGGATTAAGCAGGATTATCTGTATTTAAAAGACTATGCCCGGG
TATTCGCTTTAGCTGGTGGTAAAGCTAGAAAATTAGAACAGATGCAGATGTTTGCCAGTTTAATGGATGGAATATTAAAC
ACTGAAATGAAATTACACAGAGATTATTGTGCTGAATTTGGAATTGATACTCAAGAATTAGAAAAGATTAGTAAGTCACC
AACTTGTCAGGCTTATACGGATTTTCTAGTTAGAACCTCTGCCAATGAAACTGTTGGAGTAACTGTAGCGGCGTTACTGC
CATGTTTATGGGGTTTTTATGAAATTGGAAGTAATTTGAAACAAACAGGGGATACTAGCAGCTCCAACCCTTATAGACAT
TGGATAGAAATGTACTCTTCACAAGAATTTGCTGATCTCGCAAAATGGGGAAAAGATTTTATGGAATACTTTGCTGAAGA
AGCTGGTCAGGAAGAATGGGAAAGTATGAAACAGGCTTTTCTAATAAGCAGCAAATACGAGGCAATGTTCTGGGAAATGG
CACATATATTAGAAGAATGGAAGTTTTAA

Upstream 100 bases:

>100_bases
TGTATCTCTGTGTATATGGTCGGCACTTGGTGCACCTTGATGCATATGGGCCTGCTCTACCTTTTATTAAAAGTAAAAAT
ATAATTTGTGAGGTGATATC

Downstream 100 bases:

>100_bases
GGGAGTTATATTATTTGTAGCATTAGATGTACCTAGGGGTAGGGTATTCACTTGATGGTTAATTACATAAACTAATTGGA
TATTTAAAAACATACTAGGA

Product: transcriptional activator, TenA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSYCQTLRELGSDVWDGWHEHPFIKGIGNGNLEREKFIFWIKQDYLYLKDYARVFALAGGKARKLEQMQMFASLMDGILN
TEMKLHRDYCAEFGIDTQELEKISKSPTCQAYTDFLVRTSANETVGVTVAALLPCLWGFYEIGSNLKQTGDTSSSNPYRH
WIEMYSSQEFADLAKWGKDFMEYFAEEAGQEEWESMKQAFLISSKYEAMFWEMAHILEEWKF

Sequences:

>Translated_222_residues
MSYCQTLRELGSDVWDGWHEHPFIKGIGNGNLEREKFIFWIKQDYLYLKDYARVFALAGGKARKLEQMQMFASLMDGILN
TEMKLHRDYCAEFGIDTQELEKISKSPTCQAYTDFLVRTSANETVGVTVAALLPCLWGFYEIGSNLKQTGDTSSSNPYRH
WIEMYSSQEFADLAKWGKDFMEYFAEEAGQEEWESMKQAFLISSKYEAMFWEMAHILEEWKF
>Mature_221_residues
SYCQTLRELGSDVWDGWHEHPFIKGIGNGNLEREKFIFWIKQDYLYLKDYARVFALAGGKARKLEQMQMFASLMDGILNT
EMKLHRDYCAEFGIDTQELEKISKSPTCQAYTDFLVRTSANETVGVTVAALLPCLWGFYEIGSNLKQTGDTSSSNPYRHW
IEMYSSQEFADLAKWGKDFMEYFAEEAGQEEWESMKQAFLISSKYEAMFWEMAHILEEWKF

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=202, Percent_Identity=32.6732673267327, Blast_Score=110, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324997, Length=201, Percent_Identity=30.8457711442786, Blast_Score=106, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6325378, Length=201, Percent_Identity=30.8457711442786, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 25937; Mature: 25805

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYCQTLRELGSDVWDGWHEHPFIKGIGNGNLEREKFIFWIKQDYLYLKDYARVFALAGG
CCHHHHHHHHHHHHHCCHHCCCCEEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHCCC
KARKLEQMQMFASLMDGILNTEMKLHRDYCAEFGIDTQELEKISKSPTCQAYTDFLVRTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCC
ANETVGVTVAALLPCLWGFYEIGSNLKQTGDTSSSNPYRHWIEMYSSQEFADLAKWGKDF
CCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
MEYFAEEAGQEEWESMKQAFLISSKYEAMFWEMAHILEEWKF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYCQTLRELGSDVWDGWHEHPFIKGIGNGNLEREKFIFWIKQDYLYLKDYARVFALAGG
CHHHHHHHHHHHHHCCHHCCCCEEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHCCC
KARKLEQMQMFASLMDGILNTEMKLHRDYCAEFGIDTQELEKISKSPTCQAYTDFLVRTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCC
ANETVGVTVAALLPCLWGFYEIGSNLKQTGDTSSSNPYRHWIEMYSSQEFADLAKWGKDF
CCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
MEYFAEEAGQEEWESMKQAFLISSKYEAMFWEMAHILEEWKF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]