Click here to switch to the map view.

The map label for this gene is 188587086

Identifier: 188587086

GI number: 188587086

Start: 2667018

End: 2668259

Strand: Reverse

Name: 188587086

Synonym: Nther_2480

Alternate gene names: NA

Gene position: 2668259-2667018 (Counterclockwise)

Preceding gene: 188587087

Following gene: 188587084

Centisome position: 84.29

GC content: 33.49

Gene sequence:

>1242_bases
ATGGTCAAAAAACTATTTTGTCTTATTTTGATGGGACTTATAATTACATTGTTAGGCGGGTGTGAGGACGCAGAGAAAAG
TGAGCAAGAATTTGATGAAGTAATACCAAAGGAAGAGCCAACTGAATTAGAAGAACTAACTGAAGAAGAAAAAGTCGAGG
ACTTTAAATACATGTACAATATAATGAAAGAAAATTATGTCAATTTATACGATATAGATACTGATTGGCTGGATATGAAA
GCTCACTTTAAGGCATCTGTGAAGGATACAGATGATAATTATGAGTTTTATCAACAAATGTATAATAGTTTAAGAGTTAT
CGATGATTTTCATTTGAGCATACACGATCCCGAAACATATTTTTCAAACCCCGAGTATGATTCAATTCCGGAAAGATTAC
AACAATTTGAGGATATTTATGAACACGCAGACAAGAAATATCAAGGATGGAAGGAAATATTTAACGAGAAAGGTTACGAT
ATTGACCCTGAACAATTACCACAAGAAGAACAATATTTAGAGGATGGAGTAGTTAATATAAACACCGAAATTATCGAAGA
AGGGAAAATTGCATATTTACAAATACATTCTTTTATGATTGATTCAAGCGAGGAAATTAGGAATTTTATGGAAGAAATTA
GTGATTATCCTTATTTAATAATTGATATTAGAGGTAATAAGGGAGGTATGCTGCATTGGCAAGATATTTTTTATAATTTA
GAGGAGGTTGACTATAAATCGTATTTGTTTTCCAAAGGAGGAGACTTGGCAAATTATTTCTTAGAACACAAAGTTTTGGA
GGATTATAATATAGACGATATAGAAGAGTATCCAGGATATGAAGATTTACCCGACTATATTCAAGAAAACTTTGAAGACT
ATATTTGGAAAGAAAAAACTATTGAACCTGAAGATCCTCTGGATTTTTCCGGAGAAATTTTCATATTAACAGACAGGTAT
GTCTATTCGGCATCTGATCGCTTAGTAAATTTTGCTAGAATAACAGACTTGGCAACGGTAGTCGGTACCAGAACTCGTGG
TGGTGGAATGAACGGTCCTCAACGTTTGTTATATTCTCTTCCCAACAGTGGATTAGTTGTCGAATTTGAAGGGTTTTTAG
GTTTAAATGCCGATGGTAAGAATAGTTATGTGGGCACTGAACCCGATATTGAGGTAGAGACACAAACTTATCAGGAGCTA
ATTGATGAAACGGTGGAGATTATTGAAGAAGGAAGATATTAA

Upstream 100 bases:

>100_bases
GAAACGGTGGAAATTATTGAAGAAGGAAGATATTGACATATTAATGCCAGACTTGATTAGTTTAAATTAATATTTTTTTG
GCGTTATGGGAGGAAAAGCG

Downstream 100 bases:

>100_bases
ACCTGAAGAAGATGAGCGACTAAAGCAAAAAAACAAATTGCTGAACTTAAATATAGTATGTAGCTGTTTTAGTTAAGAAC
GCCTAAAAATAAGTCGGGTA

Product: peptidase S41

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVKKLFCLILMGLIITLLGGCEDAEKSEQEFDEVIPKEEPTELEELTEEEKVEDFKYMYNIMKENYVNLYDIDTDWLDMK
AHFKASVKDTDDNYEFYQQMYNSLRVIDDFHLSIHDPETYFSNPEYDSIPERLQQFEDIYEHADKKYQGWKEIFNEKGYD
IDPEQLPQEEQYLEDGVVNINTEIIEEGKIAYLQIHSFMIDSSEEIRNFMEEISDYPYLIIDIRGNKGGMLHWQDIFYNL
EEVDYKSYLFSKGGDLANYFLEHKVLEDYNIDDIEEYPGYEDLPDYIQENFEDYIWKEKTIEPEDPLDFSGEIFILTDRY
VYSASDRLVNFARITDLATVVGTRTRGGGMNGPQRLLYSLPNSGLVVEFEGFLGLNADGKNSYVGTEPDIEVETQTYQEL
IDETVEIIEEGRY

Sequences:

>Translated_413_residues
MVKKLFCLILMGLIITLLGGCEDAEKSEQEFDEVIPKEEPTELEELTEEEKVEDFKYMYNIMKENYVNLYDIDTDWLDMK
AHFKASVKDTDDNYEFYQQMYNSLRVIDDFHLSIHDPETYFSNPEYDSIPERLQQFEDIYEHADKKYQGWKEIFNEKGYD
IDPEQLPQEEQYLEDGVVNINTEIIEEGKIAYLQIHSFMIDSSEEIRNFMEEISDYPYLIIDIRGNKGGMLHWQDIFYNL
EEVDYKSYLFSKGGDLANYFLEHKVLEDYNIDDIEEYPGYEDLPDYIQENFEDYIWKEKTIEPEDPLDFSGEIFILTDRY
VYSASDRLVNFARITDLATVVGTRTRGGGMNGPQRLLYSLPNSGLVVEFEGFLGLNADGKNSYVGTEPDIEVETQTYQEL
IDETVEIIEEGRY
>Mature_413_residues
MVKKLFCLILMGLIITLLGGCEDAEKSEQEFDEVIPKEEPTELEELTEEEKVEDFKYMYNIMKENYVNLYDIDTDWLDMK
AHFKASVKDTDDNYEFYQQMYNSLRVIDDFHLSIHDPETYFSNPEYDSIPERLQQFEDIYEHADKKYQGWKEIFNEKGYD
IDPEQLPQEEQYLEDGVVNINTEIIEEGKIAYLQIHSFMIDSSEEIRNFMEEISDYPYLIIDIRGNKGGMLHWQDIFYNL
EEVDYKSYLFSKGGDLANYFLEHKVLEDYNIDDIEEYPGYEDLPDYIQENFEDYIWKEKTIEPEDPLDFSGEIFILTDRY
VYSASDRLVNFARITDLATVVGTRTRGGGMNGPQRLLYSLPNSGLVVEFEGFLGLNADGKNSYVGTEPDIEVETQTYQEL
IDETVEIIEEGRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48631; Mature: 48631

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKLFCLILMGLIITLLGGCEDAEKSEQEFDEVIPKEEPTELEELTEEEKVEDFKYMYN
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IMKENYVNLYDIDTDWLDMKAHFKASVKDTDDNYEFYQQMYNSLRVIDDFHLSIHDPETY
HHHCCCCEEEECCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCHHH
FSNPEYDSIPERLQQFEDIYEHADKKYQGWKEIFNEKGYDIDPEQLPQEEQYLEDGVVNI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCEEC
NTEIIEEGKIAYLQIHSFMIDSSEEIRNFMEEISDYPYLIIDIRGNKGGMLHWQDIFYNL
CHHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHH
EEVDYKSYLFSKGGDLANYFLEHKVLEDYNIDDIEEYPGYEDLPDYIQENFEDYIWKEKT
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCC
IEPEDPLDFSGEIFILTDRYVYSASDRLVNFARITDLATVVGTRTRGGGMNGPQRLLYSL
CCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
PNSGLVVEFEGFLGLNADGKNSYVGTEPDIEVETQTYQELIDETVEIIEEGRY
CCCCEEEEECCCEECCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKKLFCLILMGLIITLLGGCEDAEKSEQEFDEVIPKEEPTELEELTEEEKVEDFKYMYN
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IMKENYVNLYDIDTDWLDMKAHFKASVKDTDDNYEFYQQMYNSLRVIDDFHLSIHDPETY
HHHCCCCEEEECCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCHHH
FSNPEYDSIPERLQQFEDIYEHADKKYQGWKEIFNEKGYDIDPEQLPQEEQYLEDGVVNI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCEEC
NTEIIEEGKIAYLQIHSFMIDSSEEIRNFMEEISDYPYLIIDIRGNKGGMLHWQDIFYNL
CHHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHH
EEVDYKSYLFSKGGDLANYFLEHKVLEDYNIDDIEEYPGYEDLPDYIQENFEDYIWKEKT
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCC
IEPEDPLDFSGEIFILTDRYVYSASDRLVNFARITDLATVVGTRTRGGGMNGPQRLLYSL
CCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
PNSGLVVEFEGFLGLNADGKNSYVGTEPDIEVETQTYQELIDETVEIIEEGRY
CCCCEEEEECCCEECCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA