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The map label for this gene is ybjE [H]

Identifier: 188587084

GI number: 188587084

Start: 2665074

End: 2666012

Strand: Reverse

Name: ybjE [H]

Synonym: Nther_2478

Alternate gene names: 188587084

Gene position: 2666012-2665074 (Counterclockwise)

Preceding gene: 188587086

Following gene: 188587083

Centisome position: 84.22

GC content: 35.89

Gene sequence:

>939_bases
ATGTGGTGGATTATATTACCTTTGATAGTAGGTTTGATTATTTCTTTAAAATTGCCTTCTAAAGTAACCAATATCCCTAT
TAGTAAAATTATCAACTGTAGTATTTATGTATTGTTATTTGTAATGGGAATTAGATTGGGAGCTGACCCTGAAGTGATGG
AGGAGTTAAGCAATTTAGGGGCTTATGCATTTGTTATAGCAGTGGTTACAATCATTGGAAGTTTGATTGTTTTGTTTGGA
TTAAATAAAGTTGTAAATTTAAAGTTTTCATCCGAACAAGTAGATTATGAAGAAGATGAATGGGATGAAACTGGTGCCGA
ATATACTTTTACAGTTATCTTAGTTTTACTGGTAATAGCAGGGACGATCTTTGGTTGGCTCTTTGTGTCAGATTCGTTTT
TACCCGTGCTGGACAGTCTTACTACCTGGATATTAGGGATGTTATTATTCGGTGTTGGACTGGACTTGGGCATGTCCAGG
TCTGTTTTTGAAAATATTACAAATCAGGGTATAAAATTTTTAATTCTTTGTTTGGCAACACCTTTAGGAGTGGTTTTTGG
CACTGTTTTAGCGGGTGTTGTACTAGCATTATTCACTGATTTTATAACCTGGAATGAGGGGGCAGCCCTTGCTTCGGGTT
TTGGTTGGTATAGTTTGTCTGCAGTTATCATTTCTGAAGTGCATAGTCCATTATTAGGTGCAGTCGGTTTTTTAGCCAAT
ATTTTCAGGGAGATTTTAGCAATTATCTTTACTCCCATTATAGCCAAATATTTAGGTGGAGTTGTTTCAATAGCCCCCGG
GGGTGCAACTACAATGGACGTAACTCTTCCTATCATTTCTAAAAGTGCAGGGAAAGAATTTATACCAATAGCTTTTTTTA
ACGGACTAATTCTTTCTTTGTTAGTTCCGATTCTGGTTAACTTTTTTGTTGCGTTATGA

Upstream 100 bases:

>100_bases
GACTTCACAGAAATTTTAATAACCCAAAGGATATAGATATCCTTGCATGGAAGAAGATAGTAGCCAGTATTAGATACAAC
AAAGTTTGGAGGGAAAGCAA

Downstream 100 bases:

>100_bases
GGTGGTTTGCTATGAATAACGAGGCCAAAGAGACCAAAAAGTTCAAAGGGAATATTTTTAATATTCAAAGGTTTTCAATT
CATGATGGCCCTGGAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MWWIILPLIVGLIISLKLPSKVTNIPISKIINCSIYVLLFVMGIRLGADPEVMEELSNLGAYAFVIAVVTIIGSLIVLFG
LNKVVNLKFSSEQVDYEEDEWDETGAEYTFTVILVLLVIAGTIFGWLFVSDSFLPVLDSLTTWILGMLLFGVGLDLGMSR
SVFENITNQGIKFLILCLATPLGVVFGTVLAGVVLALFTDFITWNEGAALASGFGWYSLSAVIISEVHSPLLGAVGFLAN
IFREILAIIFTPIIAKYLGGVVSIAPGGATTMDVTLPIISKSAGKEFIPIAFFNGLILSLLVPILVNFFVAL

Sequences:

>Translated_312_residues
MWWIILPLIVGLIISLKLPSKVTNIPISKIINCSIYVLLFVMGIRLGADPEVMEELSNLGAYAFVIAVVTIIGSLIVLFG
LNKVVNLKFSSEQVDYEEDEWDETGAEYTFTVILVLLVIAGTIFGWLFVSDSFLPVLDSLTTWILGMLLFGVGLDLGMSR
SVFENITNQGIKFLILCLATPLGVVFGTVLAGVVLALFTDFITWNEGAALASGFGWYSLSAVIISEVHSPLLGAVGFLAN
IFREILAIIFTPIIAKYLGGVVSIAPGGATTMDVTLPIISKSAGKEFIPIAFFNGLILSLLVPILVNFFVAL
>Mature_312_residues
MWWIILPLIVGLIISLKLPSKVTNIPISKIINCSIYVLLFVMGIRLGADPEVMEELSNLGAYAFVIAVVTIIGSLIVLFG
LNKVVNLKFSSEQVDYEEDEWDETGAEYTFTVILVLLVIAGTIFGWLFVSDSFLPVLDSLTTWILGMLLFGVGLDLGMSR
SVFENITNQGIKFLILCLATPLGVVFGTVLAGVVLALFTDFITWNEGAALASGFGWYSLSAVIISEVHSPLLGAVGFLAN
IFREILAIIFTPIIAKYLGGVVSIAPGGATTMDVTLPIISKSAGKEFIPIAFFNGLILSLLVPILVNFFVAL

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=310, Percent_Identity=28.3870967741935, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 33645; Mature: 33645

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWIILPLIVGLIISLKLPSKVTNIPISKIINCSIYVLLFVMGIRLGADPEVMEELSNLG
CHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
AYAFVIAVVTIIGSLIVLFGLNKVVNLKFSSEQVDYEEDEWDETGAEYTFTVILVLLVIA
HHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
GTIFGWLFVSDSFLPVLDSLTTWILGMLLFGVGLDLGMSRSVFENITNQGIKFLILCLAT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
PLGVVFGTVLAGVVLALFTDFITWNEGAALASGFGWYSLSAVIISEVHSPLLGAVGFLAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IFREILAIIFTPIIAKYLGGVVSIAPGGATTMDVTLPIISKSAGKEFIPIAFFNGLILSL
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHH
LVPILVNFFVAL
HHHHHHHHHHHC
>Mature Secondary Structure
MWWIILPLIVGLIISLKLPSKVTNIPISKIINCSIYVLLFVMGIRLGADPEVMEELSNLG
CHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
AYAFVIAVVTIIGSLIVLFGLNKVVNLKFSSEQVDYEEDEWDETGAEYTFTVILVLLVIA
HHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
GTIFGWLFVSDSFLPVLDSLTTWILGMLLFGVGLDLGMSRSVFENITNQGIKFLILCLAT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
PLGVVFGTVLAGVVLALFTDFITWNEGAALASGFGWYSLSAVIISEVHSPLLGAVGFLAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IFREILAIIFTPIIAKYLGGVVSIAPGGATTMDVTLPIISKSAGKEFIPIAFFNGLILSL
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHH
LVPILVNFFVAL
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]