| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is tarA [H]
Identifier: 188586980
GI number: 188586980
Start: 2532756
End: 2533583
Strand: Reverse
Name: tarA [H]
Synonym: Nther_2372
Alternate gene names: 188586980
Gene position: 2533583-2532756 (Counterclockwise)
Preceding gene: 188586981
Following gene: 188586979
Centisome position: 80.04
GC content: 39.13
Gene sequence:
>828_bases GTGGGTACAACGGATTATAATCAAAATGAATTTAATAATCAAACAGGGGAACGAATATATTCAACAGAGTACGAAAAGTT GATAGTTAAGAGAGAGCAAGTCCTGGGTCAGCCCGTGGACTTGCTAACTTATGATAAAGCGTTGTCCTTGACACAATCAT GGTTAAGCAATCCGGTTGAGACCTGTGAAACAAAGTTTATTTTTGCACAAAATCCCGAAAAAGTTCTCAGGAGTATGGAT GAACCTGAACTTAGCTCAGTTCTTGAAGAAGCAGATTTACTGATACCAGACGGCAGTGGTGTAGTCTGGGCTTTGAATAG AAAAGGATATGATTTACCAGGTCGGGTAACTGGTATAGATTTAATGCATAGACTGCTGGCTCAGGCAGAAGAACTGGGTG CAGGAGTGTATTTTCTCGGGGGCAAGGAAACGGTTATCAACAAGGCTATCAAAAAAATGAATAAGGAGTTTCCCGGTTTA CAAATCAAGGGATTTCATCACGGTTATTTTTCTCAACAGGAGGAAGATAAAATAGTAAAAACAATTAATCAGTCTGATGC CAGTTTACTATTTGTAGCCATGGGAAGCCCTAAGCAGGAGTTGTTTTTGGCTAGAAATAGAGACAAACTGGCAATTAATT TAGGTATGGGAATAGGTGGAAGTCTGGACGTTATTGCCGGTGAAGTTAACCGGGCTCCTGAAATATTTCAAAAATTAAAG CTGGAATGGTTTTACAGGATAGTCACAGATCCCAAACGAATTAGTAGAGGAATGCAAATTCCACGTTTTATTGGCAAGAT TATTTTTAGCTCTAAAGAGGAAATTTGA
Upstream 100 bases:
>100_bases TCTGATTTATCATAAGGATAGAGTATTTTCCCCTACTTGTGAACGCTTTATAGCTCATGTACAAGACCAAAAAATTTAGC TGAAACAGAGAGGTGTTACG
Downstream 100 bases:
>100_bases AAAAAAATGTAGAAGTGTTATTATCTAATAATAAATTACATTTTATACATCGCCCATCTACAATTAATATAATTTAGATT TAAATAGTAGTGAGGATTGA
Product: glycosyl transferase, WecB/TagA/CpsF family
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MGTTDYNQNEFNNQTGERIYSTEYEKLIVKREQVLGQPVDLLTYDKALSLTQSWLSNPVETCETKFIFAQNPEKVLRSMD EPELSSVLEEADLLIPDGSGVVWALNRKGYDLPGRVTGIDLMHRLLAQAEELGAGVYFLGGKETVINKAIKKMNKEFPGL QIKGFHHGYFSQQEEDKIVKTINQSDASLLFVAMGSPKQELFLARNRDKLAINLGMGIGGSLDVIAGEVNRAPEIFQKLK LEWFYRIVTDPKRISRGMQIPRFIGKIIFSSKEEI
Sequences:
>Translated_275_residues MGTTDYNQNEFNNQTGERIYSTEYEKLIVKREQVLGQPVDLLTYDKALSLTQSWLSNPVETCETKFIFAQNPEKVLRSMD EPELSSVLEEADLLIPDGSGVVWALNRKGYDLPGRVTGIDLMHRLLAQAEELGAGVYFLGGKETVINKAIKKMNKEFPGL QIKGFHHGYFSQQEEDKIVKTINQSDASLLFVAMGSPKQELFLARNRDKLAINLGMGIGGSLDVIAGEVNRAPEIFQKLK LEWFYRIVTDPKRISRGMQIPRFIGKIIFSSKEEI >Mature_274_residues GTTDYNQNEFNNQTGERIYSTEYEKLIVKREQVLGQPVDLLTYDKALSLTQSWLSNPVETCETKFIFAQNPEKVLRSMDE PELSSVLEEADLLIPDGSGVVWALNRKGYDLPGRVTGIDLMHRLLAQAEELGAGVYFLGGKETVINKAIKKMNKEFPGLQ IKGFHHGYFSQQEEDKIVKTINQSDASLLFVAMGSPKQELFLARNRDKLAINLGMGIGGSLDVIAGEVNRAPEIFQKLKL EWFYRIVTDPKRISRGMQIPRFIGKIIFSSKEEI
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=190, Percent_Identity=37.3684210526316, Blast_Score=119, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 31049; Mature: 30918
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTDYNQNEFNNQTGERIYSTEYEKLIVKREQVLGQPVDLLTYDKALSLTQSWLSNPVE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH TCETKFIFAQNPEKVLRSMDEPELSSVLEEADLLIPDGSGVVWALNRKGYDLPGRVTGID HHCEEEEEECCHHHHHHCCCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCHHHH LMHRLLAQAEELGAGVYFLGGKETVINKAIKKMNKEFPGLQIKGFHHGYFSQQEEDKIVK HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH TINQSDASLLFVAMGSPKQELFLARNRDKLAINLGMGIGGSLDVIAGEVNRAPEIFQKLK HHCCCCCEEEEEEECCCHHHHHEECCCCEEEEEECCCCCCCHHEEECCCCCCHHHHHHHH LEWFYRIVTDPKRISRGMQIPRFIGKIIFSSKEEI HHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure GTTDYNQNEFNNQTGERIYSTEYEKLIVKREQVLGQPVDLLTYDKALSLTQSWLSNPVE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH TCETKFIFAQNPEKVLRSMDEPELSSVLEEADLLIPDGSGVVWALNRKGYDLPGRVTGID HHCEEEEEECCHHHHHHCCCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCHHHH LMHRLLAQAEELGAGVYFLGGKETVINKAIKKMNKEFPGLQIKGFHHGYFSQQEEDKIVK HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH TINQSDASLLFVAMGSPKQELFLARNRDKLAINLGMGIGGSLDVIAGEVNRAPEIFQKLK HHCCCCCEEEEEEECCCHHHHHEECCCCEEEEEECCCCCCCHHEEECCCCCCHHHHHHHH LEWFYRIVTDPKRISRGMQIPRFIGKIIFSSKEEI HHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]