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The map label for this gene is 188586926

Identifier: 188586926

GI number: 188586926

Start: 2466590

End: 2467291

Strand: Reverse

Name: 188586926

Synonym: Nther_2318

Alternate gene names: NA

Gene position: 2467291-2466590 (Counterclockwise)

Preceding gene: 188586927

Following gene: 188586925

Centisome position: 77.94

GC content: 38.75

Gene sequence:

>702_bases
TTGAAAAAACTCAAAAAATACCGTGGACTATTAGTATCACTTATTTTGGCAATTGTTACTGTACTGATTATCCATCAGTA
CATTTCTTCTCTAGAAACAGCTTATGAAGGTACTGGACCTAGAGAGATAGATGGCGAAGATCAAGTAGCTGTTGTAGTGG
CTACAAGCAATTTAGACACAGGGACAATTCTGACTCAGGATCATTTAGATACCAGAAAAGTTCCAGAGCAAACTGCTCAT
CCTCAAGCTGTAACGGATAAAGAAGAAATAACTGGAGAAGTATTGAAACAAGATGTGGTTGAGCACGAAGTTCTAATGTC
TAGTAGGGTTCTTGGTGAAGAAGAAGCTAATAAATTATCAGAAGTAATACCTGAAAACAAGAGGGCTATGTCAGTTGCCG
TGGATCAAGTTTCTGGTGTTGCCGGTTTTATTCAGGCTGGAGATTATGTGGATGTAGTAGCAACAAAGGATGAAGAAGAT
AGAGAAGGACAAGAGCCTTCCCAAGATAGTAGTTCAGAAATTATCCTAGATAACTTACAAGTCTTAGCTGTTGGTGATAG
AATCCTGTATTCAAGACAAGAATTGGTCCAAGAAGTTTCAACTGTAACCCTGGCCGTTAATCGTAATGAAGCTACTGAAC
TTACCCATGCTGAAGAAGAACATGTGATCAGGTTGCTATTACAGCCTATTACCGAGAATTAA

Upstream 100 bases:

>100_bases
GAATTTTCCAGGAGAAAGTTGCTGATGGAGAGCTTGATGAAGATTTAGAAGATTATGGGCTAAGAGGTACAAAGCTTGTC
AGATAAAGGAGTGACGTAGA

Downstream 100 bases:

>100_bases
AGGGAGGGGTAGAAATGAAACGTAAGATAGATATTTTAATAGCCGATGATATTTCAGAAACCAGAGAAAATATCAAGCGA
TTTTTAGGATTTGAGCGGGA

Product: Flp pilus assembly protein CpaB

Products: NA

Alternate protein names: SAF Domain-Containing Protein; Flp Pilus Assembly CpaB; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Flp Pilus Assembly Protein RcpC/CpaB; Flp Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Flp Pilus Assembly Protein CpaB-Like Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKKLKKYRGLLVSLILAIVTVLIIHQYISSLETAYEGTGPREIDGEDQVAVVVATSNLDTGTILTQDHLDTRKVPEQTAH
PQAVTDKEEITGEVLKQDVVEHEVLMSSRVLGEEEANKLSEVIPENKRAMSVAVDQVSGVAGFIQAGDYVDVVATKDEED
REGQEPSQDSSSEIILDNLQVLAVGDRILYSRQELVQEVSTVTLAVNRNEATELTHAEEEHVIRLLLQPITEN

Sequences:

>Translated_233_residues
MKKLKKYRGLLVSLILAIVTVLIIHQYISSLETAYEGTGPREIDGEDQVAVVVATSNLDTGTILTQDHLDTRKVPEQTAH
PQAVTDKEEITGEVLKQDVVEHEVLMSSRVLGEEEANKLSEVIPENKRAMSVAVDQVSGVAGFIQAGDYVDVVATKDEED
REGQEPSQDSSSEIILDNLQVLAVGDRILYSRQELVQEVSTVTLAVNRNEATELTHAEEEHVIRLLLQPITEN
>Mature_233_residues
MKKLKKYRGLLVSLILAIVTVLIIHQYISSLETAYEGTGPREIDGEDQVAVVVATSNLDTGTILTQDHLDTRKVPEQTAH
PQAVTDKEEITGEVLKQDVVEHEVLMSSRVLGEEEANKLSEVIPENKRAMSVAVDQVSGVAGFIQAGDYVDVVATKDEED
REGQEPSQDSSSEIILDNLQVLAVGDRILYSRQELVQEVSTVTLAVNRNEATELTHAEEEHVIRLLLQPITEN

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25693; Mature: 25693

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKKYRGLLVSLILAIVTVLIIHQYISSLETAYEGTGPREIDGEDQVAVVVATSNLDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
GTILTQDHLDTRKVPEQTAHPQAVTDKEEITGEVLKQDVVEHEVLMSSRVLGEEEANKLS
CCEEECCCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EVIPENKRAMSVAVDQVSGVAGFIQAGDYVDVVATKDEEDREGQEPSQDSSSEIILDNLQ
HHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCCCCCCEECCCCE
VLAVGDRILYSRQELVQEVSTVTLAVNRNEATELTHAEEEHVIRLLLQPITEN
EEEECHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLKKYRGLLVSLILAIVTVLIIHQYISSLETAYEGTGPREIDGEDQVAVVVATSNLDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
GTILTQDHLDTRKVPEQTAHPQAVTDKEEITGEVLKQDVVEHEVLMSSRVLGEEEANKLS
CCEEECCCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EVIPENKRAMSVAVDQVSGVAGFIQAGDYVDVVATKDEEDREGQEPSQDSSSEIILDNLQ
HHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCCCCCCEECCCCE
VLAVGDRILYSRQELVQEVSTVTLAVNRNEATELTHAEEEHVIRLLLQPITEN
EEEECHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA