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The map label for this gene is 188586923

Identifier: 188586923

GI number: 188586923

Start: 2461336

End: 2462289

Strand: Reverse

Name: 188586923

Synonym: Nther_2314

Alternate gene names: NA

Gene position: 2462289-2461336 (Counterclockwise)

Preceding gene: 188586924

Following gene: 188586922

Centisome position: 77.78

GC content: 37.63

Gene sequence:

>954_bases
ATGCCAGGTACACTAATGCTTTATCTCACTATTACGGCTTGTATGACAGGTATCTTTTTAAATATGTATCAATTTTTGTT
TAGAAAACGTATTGAAACAAAAAATCGGCTTTCTAAGTTAAATGAGTTAACAGATGGAAGTGCGGGTTCAGGTTTTGAGC
ACACTCCCAGGACACCACTGCAAAAAGCCTTAGCCCTTCCTGTTCATCGGCGGGTGGTTTTGCCCTTATTTCATAAGTTA
ACTGCCTTCCTAGAAAAACTATTACCTCATAAAGTCTTTACTGGCTTTAAGAAGGATATAATATCGGCCGGATTATCCCA
ACATTTAAATGCCACTGAACTATTAGCTGCCTATTTTTTGATTATTTGTCTCGGATTAGTAATGGCAGTATTTTTTGTAA
CCTTTCTTTCAACCCCTGTATGGACCGGAATGGTTTTAGTTATACTCGGTTTTATAGGTCCGAAATTGTGGCTTTCCAGT
AAAGTTAATACAAGAAAAAATGAGATTCAAAGAGCCCTTCCAGAATTTTTAGATCTGCTCACAGTTAGTGTAGAAGCAGG
ATTAGGTTTTGAATCTTCACTAAAAAAGGTAGCAGAGGAAGGAACTGGCCCCCTGGCTGTAGAAATAAAAAGAGTAACCC
AGGAAATTAGTATGGGAAAAAGTCGTAAAGAAGCCCTGATTGATCTGAAAGAGCGCATTGACCTCCAAGATCTATCAACT
TTTATTAATGCTATTATCCAAGCGGAACAATTGGGTGTCGGTATTAGCCGAGTTTTAAAAGTGGAATCAAAAGAGTTTCG
CAGAAAGAGGAGACAGAGAGCAGAAGAACAGGCTATGAAAGCCCCTGTCAAGCTCTTGATTCCCCTGATTTTATTTATTT
TCCCTACTATTTTTATTATTTTACTCGGACCTGCAGCACTTAGGATTATGGATAATTTAATAGGAACTTTTTAA

Upstream 100 bases:

>100_bases
TATTTAGCCAAATTATAGGAGTGTTTTTTATTAAAAAGGTAGTTGATATTGAAGTATAAGTAAAAGTTTTGAGGATTAAC
CAGTTAAGGGAGTGAATACT

Downstream 100 bases:

>100_bases
TTAAATAATCTGTTTGAGTTACTTGTTTAGATAAAATTTTATAATTTATCATATACTATATTTATATTAGAAACTTAGAA
GCCAAGGGGGAAAATGAGTC

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; TadC Family Type II/IV Secretion System Protein; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Assembly Protein TadB; Pilus Component Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Secretion System Protein TadC; Pilus Assembly Protein TadC; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Type II Secretion System F Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Components Of Type IV Pilus

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MPGTLMLYLTITACMTGIFLNMYQFLFRKRIETKNRLSKLNELTDGSAGSGFEHTPRTPLQKALALPVHRRVVLPLFHKL
TAFLEKLLPHKVFTGFKKDIISAGLSQHLNATELLAAYFLIICLGLVMAVFFVTFLSTPVWTGMVLVILGFIGPKLWLSS
KVNTRKNEIQRALPEFLDLLTVSVEAGLGFESSLKKVAEEGTGPLAVEIKRVTQEISMGKSRKEALIDLKERIDLQDLST
FINAIIQAEQLGVGISRVLKVESKEFRRKRRQRAEEQAMKAPVKLLIPLILFIFPTIFIILLGPAALRIMDNLIGTF

Sequences:

>Translated_317_residues
MPGTLMLYLTITACMTGIFLNMYQFLFRKRIETKNRLSKLNELTDGSAGSGFEHTPRTPLQKALALPVHRRVVLPLFHKL
TAFLEKLLPHKVFTGFKKDIISAGLSQHLNATELLAAYFLIICLGLVMAVFFVTFLSTPVWTGMVLVILGFIGPKLWLSS
KVNTRKNEIQRALPEFLDLLTVSVEAGLGFESSLKKVAEEGTGPLAVEIKRVTQEISMGKSRKEALIDLKERIDLQDLST
FINAIIQAEQLGVGISRVLKVESKEFRRKRRQRAEEQAMKAPVKLLIPLILFIFPTIFIILLGPAALRIMDNLIGTF
>Mature_316_residues
PGTLMLYLTITACMTGIFLNMYQFLFRKRIETKNRLSKLNELTDGSAGSGFEHTPRTPLQKALALPVHRRVVLPLFHKLT
AFLEKLLPHKVFTGFKKDIISAGLSQHLNATELLAAYFLIICLGLVMAVFFVTFLSTPVWTGMVLVILGFIGPKLWLSSK
VNTRKNEIQRALPEFLDLLTVSVEAGLGFESSLKKVAEEGTGPLAVEIKRVTQEISMGKSRKEALIDLKERIDLQDLSTF
INAIIQAEQLGVGISRVLKVESKEFRRKRRQRAEEQAMKAPVKLLIPLILFIFPTIFIILLGPAALRIMDNLIGTF

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35549; Mature: 35418

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTLMLYLTITACMTGIFLNMYQFLFRKRIETKNRLSKLNELTDGSAGSGFEHTPRTPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
QKALALPVHRRVVLPLFHKLTAFLEKLLPHKVFTGFKKDIISAGLSQHLNATELLAAYFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IICLGLVMAVFFVTFLSTPVWTGMVLVILGFIGPKLWLSSKVNTRKNEIQRALPEFLDLL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TVSVEAGLGFESSLKKVAEEGTGPLAVEIKRVTQEISMGKSRKEALIDLKERIDLQDLST
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
FINAIIQAEQLGVGISRVLKVESKEFRRKRRQRAEEQAMKAPVKLLIPLILFIFPTIFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGPAALRIMDNLIGTF
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PGTLMLYLTITACMTGIFLNMYQFLFRKRIETKNRLSKLNELTDGSAGSGFEHTPRTPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH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HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA