Click here to switch to the map view.

The map label for this gene is 188586847

Identifier: 188586847

GI number: 188586847

Start: 2375655

End: 2375984

Strand: Reverse

Name: 188586847

Synonym: Nther_2238

Alternate gene names: NA

Gene position: 2375984-2375655 (Counterclockwise)

Preceding gene: 188586848

Following gene: 188586846

Centisome position: 75.06

GC content: 42.12

Gene sequence:

>330_bases
ATGGATAAAATTAGAGGGGACTATAATCAGTATTTGAGAACCTATCAAAAAAGTATCTCCCAACTGGATAAGGTCCAAAA
AATTGAGAAAACAGGCAAGGGCCGGGGAGGAGAAGGTGCCAAGAAAAAGGATTCTCTGGAACTTACAGGTCTGTCTAAGG
AGATTAAGGTGGCCAGGGAAAAGATCTCTCAACTGGATTCACAGGAGAAAGCTCGGGTCAACGAATTAAAAGAATCCATA
CAAAGTGGCACCTATGACGTTTCTGGTGACGAAATTGCCGGTAAAATCATTGAAACTGCCCGAGAAGTTCAATTTGACCG
GGAAGTATAA

Upstream 100 bases:

>100_bases
ATTTAAGTTTTTGCTCCCAGCGGCCGACTTTATTTATAGGTGCAAATTAGGATTTCGGACTTGTGTCAATATATTCCTGT
ATAATTAGGAGTGACTTGTT

Downstream 100 bases:

>100_bases
TTCTCAGTTATCTGGATATATAGATAACTACAGTTAAGTTAATCTCGGCTTAGATTAAATGGGGTGAATTATACATGGAC
AAACTATTACAAGATCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDKIRGDYNQYLRTYQKSISQLDKVQKIEKTGKGRGGEGAKKKDSLELTGLSKEIKVAREKISQLDSQEKARVNELKESI
QSGTYDVSGDEIAGKIIETAREVQFDREV

Sequences:

>Translated_109_residues
MDKIRGDYNQYLRTYQKSISQLDKVQKIEKTGKGRGGEGAKKKDSLELTGLSKEIKVAREKISQLDSQEKARVNELKESI
QSGTYDVSGDEIAGKIIETAREVQFDREV
>Mature_109_residues
MDKIRGDYNQYLRTYQKSISQLDKVQKIEKTGKGRGGEGAKKKDSLELTGLSKEIKVAREKISQLDSQEKARVNELKESI
QSGTYDVSGDEIAGKIIETAREVQFDREV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12309; Mature: 12309

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIRGDYNQYLRTYQKSISQLDKVQKIEKTGKGRGGEGAKKKDSLELTGLSKEIKVARE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
KISQLDSQEKARVNELKESIQSGTYDVSGDEIAGKIIETAREVQFDREV
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKIRGDYNQYLRTYQKSISQLDKVQKIEKTGKGRGGEGAKKKDSLELTGLSKEIKVARE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
KISQLDSQEKARVNELKESIQSGTYDVSGDEIAGKIIETAREVQFDREV
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA