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The map label for this gene is yvyF [H]

Identifier: 188586848

GI number: 188586848

Start: 2376262

End: 2376678

Strand: Reverse

Name: yvyF [H]

Synonym: Nther_2239

Alternate gene names: 188586848

Gene position: 2376678-2376262 (Counterclockwise)

Preceding gene: 188586850

Following gene: 188586847

Centisome position: 75.08

GC content: 38.85

Gene sequence:

>417_bases
ATGCAAAACCTCAAAAACTGTAAGCGGTGCGGAAAGTTATTTTTAAAAACGACCCGAGATATTTGCCCTGATTGTCATCA
AAAGGAAGAAGATGATTTTTTGAAGGTGAAACAGTATCTGGATAAGAATCCTGGTGCGACAATTGTTGAAGTTTCCGAAG
AAACAGAAGTATCTCAAAAACAGATCAGAAAGTTCATTGAAGAGGGTAGATTACTGACCTCAAAATACGAAGCCCTGACA
ATTGAGTGTAAGCGCTGTGGTAAGGAGATTTCTCAAGGTAAATATTGTGAAAGCTGTCAAGGAGAACTTTCCCAGCAATT
TGAATCCGTCAAAGGAGAGCCCAAACAAACAGATGATGAAACTAAAGAAACAGGCAAAGTACATATTAAGGATCGTGTGG
ACAAGCGCAGAAGATAA

Upstream 100 bases:

>100_bases
ACATTATATAAAAGTTATTAATTTGGAGTAATCCGAACCCAAATTCTCACGAACAGGAGGTGAAAACCTGGGTTACTAAA
AGTAGTAACCGGGGAAAGCC

Downstream 100 bases:

>100_bases
GATGTTAGGATGATAATAAGATATGGTGGATAATTATCATAGGATAATAGGATGATAAGATAAAAAGATGATAAGATAAA
AGGATGATAAAATTTTTGCG

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MQNLKNCKRCGKLFLKTTRDICPDCHQKEEDDFLKVKQYLDKNPGATIVEVSEETEVSQKQIRKFIEEGRLLTSKYEALT
IECKRCGKEISQGKYCESCQGELSQQFESVKGEPKQTDDETKETGKVHIKDRVDKRRR

Sequences:

>Translated_138_residues
MQNLKNCKRCGKLFLKTTRDICPDCHQKEEDDFLKVKQYLDKNPGATIVEVSEETEVSQKQIRKFIEEGRLLTSKYEALT
IECKRCGKEISQGKYCESCQGELSQQFESVKGEPKQTDDETKETGKVHIKDRVDKRRR
>Mature_138_residues
MQNLKNCKRCGKLFLKTTRDICPDCHQKEEDDFLKVKQYLDKNPGATIVEVSEETEVSQKQIRKFIEEGRLLTSKYEALT
IECKRCGKEISQGKYCESCQGELSQQFESVKGEPKQTDDETKETGKVHIKDRVDKRRR

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022258 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16064; Mature: 16064

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLKNCKRCGKLFLKTTRDICPDCHQKEEDDFLKVKQYLDKNPGATIVEVSEETEVSQK
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
QIRKFIEEGRLLTSKYEALTIECKRCGKEISQGKYCESCQGELSQQFESVKGEPKQTDDE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
TKETGKVHIKDRVDKRRR
HHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MQNLKNCKRCGKLFLKTTRDICPDCHQKEEDDFLKVKQYLDKNPGATIVEVSEETEVSQK
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
QIRKFIEEGRLLTSKYEALTIECKRCGKEISQGKYCESCQGELSQQFESVKGEPKQTDDE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
TKETGKVHIKDRVDKRRR
HHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]