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The map label for this gene is yqeB [H]

Identifier: 188586820

GI number: 188586820

Start: 2346969

End: 2347766

Strand: Reverse

Name: yqeB [H]

Synonym: Nther_2211

Alternate gene names: 188586820

Gene position: 2347766-2346969 (Counterclockwise)

Preceding gene: 188586821

Following gene: 188586819

Centisome position: 74.17

GC content: 43.73

Gene sequence:

>798_bases
ATGAATAATCGAGAGTTTTACCAACTAGTGATCGATGCACTTAAGGAGAAAACTCCGTGTGCAGTAGCAACAGTAGTAAA
ATCATCTGGTTCCAGTCCTGCTAGAGAAGGAGCTAAAATGCTGGTTTATGAAGATGGCAGCATTGCAGGTACTGTAGGCG
GGGGTGCTCTAGAGGCCAGGACAATAGAAGAAGGTCTTAATTGCATCCAAACTAATCAACCTAAATTTTTGGACTATAGT
TTGAGCAAAGGAGAGGCTTCAGAATTGGGAATGGTTTGTGGTGGTAATGCCAGTATTTTCGTAGAACCAATGTTGACATC
TCCCGAACTGGTACTAGTAGGGGCAGGTCATATTTCCCAGGAAGTGGCTAAGCTGGCTCAGAACTTGGATTATCAGATCA
CTGTAATGGACGATCGGGCGGAATTTGCCTCTCGAGAAAATTTTCCCGGAGCCCATGATATATATTCCGGAGAAATTGAA
GAAACTCTATTGGAGTTTTCCATAGGGCCAAACACTTACATTGTAATTGTGACTCGAGGACATGCCCACGATCAAAAAGC
CCTGGAAACGGTTTTAGATTCTCAGGCGGCCTATATTGGCATGATTGGCAGTAAAAATAAGGTGAGAGAAGTGGTGAACA
GTTTAAAGGATAAGGGTTACAGTCAGGAACAGATTGATAGGATCTACGCACCTATAGGCCTTGATATAGGTGGGAATACT
CCTCCGGAGATTGCTGTCAGCATTATTGCCGAGATTCAAAAGGTCAGATATAAGGGGGAGGGCCGAAATGATAAGTGA

Upstream 100 bases:

>100_bases
GTTCAGAGGAAATCGCCGCTCTTGGTCATGGCGGTCTCTGTCTTCAGTGTGAACAATGCAAGTATCCCAACTGTCAATTT
GGAAAGGGGAGTGTATAAAT

Downstream 100 bases:

>100_bases
GCCAACTACAAATGAGCCAACTATGAGTGAGTCAACCATGATTGAGCCACCCATGAGTAAGCCAACCAACGATATTTATG
ATAACTTGGTTTTGATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNNREFYQLVIDALKEKTPCAVATVVKSSGSSPAREGAKMLVYEDGSIAGTVGGGALEARTIEEGLNCIQTNQPKFLDYS
LSKGEASELGMVCGGNASIFVEPMLTSPELVLVGAGHISQEVAKLAQNLDYQITVMDDRAEFASRENFPGAHDIYSGEIE
ETLLEFSIGPNTYIVIVTRGHAHDQKALETVLDSQAAYIGMIGSKNKVREVVNSLKDKGYSQEQIDRIYAPIGLDIGGNT
PPEIAVSIIAEIQKVRYKGEGRNDK

Sequences:

>Translated_265_residues
MNNREFYQLVIDALKEKTPCAVATVVKSSGSSPAREGAKMLVYEDGSIAGTVGGGALEARTIEEGLNCIQTNQPKFLDYS
LSKGEASELGMVCGGNASIFVEPMLTSPELVLVGAGHISQEVAKLAQNLDYQITVMDDRAEFASRENFPGAHDIYSGEIE
ETLLEFSIGPNTYIVIVTRGHAHDQKALETVLDSQAAYIGMIGSKNKVREVVNSLKDKGYSQEQIDRIYAPIGLDIGGNT
PPEIAVSIIAEIQKVRYKGEGRNDK
>Mature_265_residues
MNNREFYQLVIDALKEKTPCAVATVVKSSGSSPAREGAKMLVYEDGSIAGTVGGGALEARTIEEGLNCIQTNQPKFLDYS
LSKGEASELGMVCGGNASIFVEPMLTSPELVLVGAGHISQEVAKLAQNLDYQITVMDDRAEFASRENFPGAHDIYSGEIE
ETLLEFSIGPNTYIVIVTRGHAHDQKALETVLDSQAAYIGMIGSKNKVREVVNSLKDKGYSQEQIDRIYAPIGLDIGGNT
PPEIAVSIIAEIQKVRYKGEGRNDK

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=248, Percent_Identity=36.2903225806452, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 28616; Mature: 28616

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNREFYQLVIDALKEKTPCAVATVVKSSGSSPAREGAKMLVYEDGSIAGTVGGGALEAR
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHH
TIEEGLNCIQTNQPKFLDYSLSKGEASELGMVCGGNASIFVEPMLTSPELVLVGAGHISQ
HHHHHHHHHCCCCCCEEEEECCCCCHHHCCEEECCCCEEEEEECCCCCCEEEEECCHHHH
EVAKLAQNLDYQITVMDDRAEFASRENFPGAHDIYSGEIEETLLEFSIGPNTYIVIVTRG
HHHHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHEECCCCEEEEEEECC
HAHDQKALETVLDSQAAYIGMIGSKNKVREVVNSLKDKGYSQEQIDRIYAPIGLDIGGNT
CCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCC
PPEIAVSIIAEIQKVRYKGEGRNDK
CHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNNREFYQLVIDALKEKTPCAVATVVKSSGSSPAREGAKMLVYEDGSIAGTVGGGALEAR
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHH
TIEEGLNCIQTNQPKFLDYSLSKGEASELGMVCGGNASIFVEPMLTSPELVLVGAGHISQ
HHHHHHHHHCCCCCCEEEEECCCCCHHHCCEEECCCCEEEEEECCCCCCEEEEECCHHHH
EVAKLAQNLDYQITVMDDRAEFASRENFPGAHDIYSGEIEETLLEFSIGPNTYIVIVTRG
HHHHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHEECCCCEEEEEEECC
HAHDQKALETVLDSQAAYIGMIGSKNKVREVVNSLKDKGYSQEQIDRIYAPIGLDIGGNT
CCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCC
PPEIAVSIIAEIQKVRYKGEGRNDK
CHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]