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The map label for this gene is yqeB [H]

Identifier: 188586819

GI number: 188586819

Start: 2346095

End: 2346979

Strand: Reverse

Name: yqeB [H]

Synonym: Nther_2210

Alternate gene names: 188586819

Gene position: 2346979-2346095 (Counterclockwise)

Preceding gene: 188586820

Following gene: 188586818

Centisome position: 74.14

GC content: 49.94

Gene sequence:

>885_bases
ATGATAAGTGAGCCAACTACAAATGAGCCAACTATGAGTGAGTCAACCATGATTGAGCCACCCATGAGTAAGCCAACCAA
CGATATTTATGATAACTTGGTTTTGATAAAAGGTGCCGGTGATCTGGCTACAGGAGTAGCTCACAGATTATTTCGGGCCG
GAATACCTGTAATGATGACTGAGATTTCCAGACCTACTGTGGTGCGAAGAACGGTAGCCTTTGCCGAAGCCGTCTTTGAT
GGAAGTGCCCAGGTGGAGCGGGTTACTGCCAACTTGATTCAAAAGCCAGAAGACAGAACAAAGGTATTGGAGGCGGGGGA
GATCCCCCTGTTGGTTGATCCAGAGCTTAACTGTTTGGAAACAGTCCGGCCCCAGATTTTAGTGGAGGCCACCCTGGCGA
AAAAGAATACAGGCATATCTAAGGACGATGCTCCTATAGTCATTGCCCTGGGACCTGGATATATAGCTGGTCAGGACGTG
GATGCCGTGGTAGAGACCAAGAGGGGCCATTATTTAGGACGGGTTGTCTATCAGGGAAGAGCCCTTCCCAATACTGGAGT
ACCGGGAGAAGTTGCGGGTTACACCCGGGAGCGGGTACTGTATTCTCCTGGAACCGGAATGATAGAGAACTTTGCTAGGA
TTGGTGACAAAGTAGAAGCCGGTGAGCAGGTGGCTTTGGTGGAGGGCCAGCCCATTAGAGCCCAAGTATCGGGAGTATTA
AGAGGTATGATCAGACAAGGTCTAAAAGTGAAACAAGGCATGAAAGTAGGGGATGTTGATCCCCGGGCCGATGTGGAACA
CTGCTGGACCATTTCCGATAAAGCCAGGTCTGTTGCCGGTGGGGTACTGGAAGCTAGCCTGGCCCTGTCAAGATCAAAAA
TCTAA

Upstream 100 bases:

>100_bases
GCACCTATAGGCCTTGATATAGGTGGGAATACTCCTCCGGAGATTGCTGTCAGCATTATTGCCGAGATTCAAAAGGTCAG
ATATAAGGGGGAGGGCCGAA

Downstream 100 bases:

>100_bases
AGGATCTAAGGATTTAAAGAATCTAAGAATCTAAAGGAAATCTAAATGGATCTAATGAATCTAATTGGATTGGATATGAA
GGAGCTGATTTCGTGATCAA

Product: biotin/lipoyl attachment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MISEPTTNEPTMSESTMIEPPMSKPTNDIYDNLVLIKGAGDLATGVAHRLFRAGIPVMMTEISRPTVVRRTVAFAEAVFD
GSAQVERVTANLIQKPEDRTKVLEAGEIPLLVDPELNCLETVRPQILVEATLAKKNTGISKDDAPIVIALGPGYIAGQDV
DAVVETKRGHYLGRVVYQGRALPNTGVPGEVAGYTRERVLYSPGTGMIENFARIGDKVEAGEQVALVEGQPIRAQVSGVL
RGMIRQGLKVKQGMKVGDVDPRADVEHCWTISDKARSVAGGVLEASLALSRSKI

Sequences:

>Translated_294_residues
MISEPTTNEPTMSESTMIEPPMSKPTNDIYDNLVLIKGAGDLATGVAHRLFRAGIPVMMTEISRPTVVRRTVAFAEAVFD
GSAQVERVTANLIQKPEDRTKVLEAGEIPLLVDPELNCLETVRPQILVEATLAKKNTGISKDDAPIVIALGPGYIAGQDV
DAVVETKRGHYLGRVVYQGRALPNTGVPGEVAGYTRERVLYSPGTGMIENFARIGDKVEAGEQVALVEGQPIRAQVSGVL
RGMIRQGLKVKQGMKVGDVDPRADVEHCWTISDKARSVAGGVLEASLALSRSKI
>Mature_294_residues
MISEPTTNEPTMSESTMIEPPMSKPTNDIYDNLVLIKGAGDLATGVAHRLFRAGIPVMMTEISRPTVVRRTVAFAEAVFD
GSAQVERVTANLIQKPEDRTKVLEAGEIPLLVDPELNCLETVRPQILVEATLAKKNTGISKDDAPIVIALGPGYIAGQDV
DAVVETKRGHYLGRVVYQGRALPNTGVPGEVAGYTRERVLYSPGTGMIENFARIGDKVEAGEQVALVEGQPIRAQVSGVL
RGMIRQGLKVKQGMKVGDVDPRADVEHCWTISDKARSVAGGVLEASLALSRSKI

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=268, Percent_Identity=47.3880597014925, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 31566; Mature: 31566

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISEPTTNEPTMSESTMIEPPMSKPTNDIYDNLVLIKGAGDLATGVAHRLFRAGIPVMMT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEH
EISRPTVVRRTVAFAEAVFDGSAQVERVTANLIQKPEDRTKVLEAGEIPLLVDPELNCLE
HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHH
TVRPQILVEATLAKKNTGISKDDAPIVIALGPGYIAGQDVDAVVETKRGHYLGRVVYQGR
HCCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCEECCCCHHHHHHHHCCCEEEEHEEECC
ALPNTGVPGEVAGYTRERVLYSPGTGMIENFARIGDKVEAGEQVALVEGQPIRAQVSGVL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCHHCCCCEEEEECCCCHHHHHHHHH
RGMIRQGLKVKQGMKVGDVDPRADVEHCWTISDKARSVAGGVLEASLALSRSKI
HHHHHHCCHHHCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISEPTTNEPTMSESTMIEPPMSKPTNDIYDNLVLIKGAGDLATGVAHRLFRAGIPVMMT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEH
EISRPTVVRRTVAFAEAVFDGSAQVERVTANLIQKPEDRTKVLEAGEIPLLVDPELNCLE
HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHH
TVRPQILVEATLAKKNTGISKDDAPIVIALGPGYIAGQDVDAVVETKRGHYLGRVVYQGR
HCCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCEECCCCHHHHHHHHCCCEEEEHEEECC
ALPNTGVPGEVAGYTRERVLYSPGTGMIENFARIGDKVEAGEQVALVEGQPIRAQVSGVL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCHHCCCCEEEEECCCCHHHHHHHHH
RGMIRQGLKVKQGMKVGDVDPRADVEHCWTISDKARSVAGGVLEASLALSRSKI
HHHHHHCCHHHCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]