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The map label for this gene is yibP [H]

Identifier: 188586803

GI number: 188586803

Start: 2329675

End: 2330913

Strand: Reverse

Name: yibP [H]

Synonym: Nther_2194

Alternate gene names: 188586803

Gene position: 2330913-2329675 (Counterclockwise)

Preceding gene: 188586804

Following gene: 188586802

Centisome position: 73.63

GC content: 41.0

Gene sequence:

>1239_bases
GTGAATAATTTTAAATGCAGTAGCATCAAACATCGTAGGGACAGACAGTTTATATTCTTTTCCCTGATTGCTGTATTTAT
ACTAACTAATATAGTAATTACAGAAGCTTCTTCAGAAGATGAGGATATTCAGGAAAAGATTCAGGAAATAGAACAAGAAC
GACAGAGCCTAGAAAGTGAAATGGATGAGCTAGAAGAAAATATTGAGCATTTACAACAACAGGAGCGTGAAGTCGTTCAA
CGGATTCAGGAAATCGATTACAGATTGAGCCAGCAAGAACAAGAGCTCATTGAATTAGATAACGAAATTGGTGAAACAGA
GGATCAAATTGAAAAAACCACCGAGGAGCTGGAACAGGCGGAAGAAGAATTGGAAGAAAAGGAAGAGTTCCTGGGTACCA
GGATGAGGGCTACATATAAACAGGGTAATGTTTCCTACTTAGAAGTACTTTTTGAAGCCCAGGATTTTATTGACTTCCTA
TCCAGGCTGACTTATGTGCAGTCAATAGTAGATAAGGATTTAGAATTAATTGCTGAGGTTGAAGAAGAACGAGATCGGAT
TCAGGCCAAAAAAGAAGAATTGGAAGAACAGAAGGAAGATCTACAAACATTGTACGCAGAAGCTGAAGAGAAAAAACAGG
AGATTGAGCAGAATCGTCAGGAACAACAGAGGCTTCACGCGGAATTGGAAGAACAGCGAGAACAGGAACAGGAGCTATTA
AGACAAAAAGAAAATGAAGCCGATCAGTTATTAGAGGCTATTCGGGATTTACAAAGCCAGTCAGGCGAAATGGTTACACC
TATAGAATGGCCTGTGCCTGATTTTGGTAGAAACTATATCACATCACCCTTTGGAAATAGGACCCATCCTATTACCGGAC
GTGAAAGTTTCCACAGCGGTTTAGACATTGGAATTGCTCATCATCGCTGGCCGGGCTCTAATCAGTATCAGGGGAATCCG
GTTAATGCAGTATCAGCTGATTCAGGTGTAGTAATATATGCAGGTATTATGGGATCTCTAAATTCGGGTTATGGCCGTAT
TGTAATTGTCGATCACGGTGGGGGATACTCAACTTGGTATGCACATCTTAATTCCATCCTCGTATCCGAAGGGGAAGAAG
TATCTCGTGGACAACCTGTTGGTTTAATAGGTTCTACAGGCAGCAGTACAGGACCACATCTCCACTTTGAGGTGCGGAAA
AATGATAATCCTCAGAACCCCTTGGAGTATCTGAATTAA

Upstream 100 bases:

>100_bases
AGCTTTAGGTAGTATTGCATCTTTAAGGCGATTTTTGCGAGTTTAAAAATCATACAATCAGCTTATCAAAAAAGCGGGAA
AGTAAAGGGGGCACGCCGGG

Downstream 100 bases:

>100_bases
GTTAACTTATAACATGACAAATCAAGCTGGTTTATGATAAAATAAATTTATAAACTCAAAAGTCGGCTTTTAAGGCCGAC
TTTTTGAGTATTGTAAGATT

Product: Peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNNFKCSSIKHRRDRQFIFFSLIAVFILTNIVITEASSEDEDIQEKIQEIEQERQSLESEMDELEENIEHLQQQEREVVQ
RIQEIDYRLSQQEQELIELDNEIGETEDQIEKTTEELEQAEEELEEKEEFLGTRMRATYKQGNVSYLEVLFEAQDFIDFL
SRLTYVQSIVDKDLELIAEVEEERDRIQAKKEELEEQKEDLQTLYAEAEEKKQEIEQNRQEQQRLHAELEEQREQEQELL
RQKENEADQLLEAIRDLQSQSGEMVTPIEWPVPDFGRNYITSPFGNRTHPITGRESFHSGLDIGIAHHRWPGSNQYQGNP
VNAVSADSGVVIYAGIMGSLNSGYGRIVIVDHGGGYSTWYAHLNSILVSEGEEVSRGQPVGLIGSTGSSTGPHLHFEVRK
NDNPQNPLEYLN

Sequences:

>Translated_412_residues
MNNFKCSSIKHRRDRQFIFFSLIAVFILTNIVITEASSEDEDIQEKIQEIEQERQSLESEMDELEENIEHLQQQEREVVQ
RIQEIDYRLSQQEQELIELDNEIGETEDQIEKTTEELEQAEEELEEKEEFLGTRMRATYKQGNVSYLEVLFEAQDFIDFL
SRLTYVQSIVDKDLELIAEVEEERDRIQAKKEELEEQKEDLQTLYAEAEEKKQEIEQNRQEQQRLHAELEEQREQEQELL
RQKENEADQLLEAIRDLQSQSGEMVTPIEWPVPDFGRNYITSPFGNRTHPITGRESFHSGLDIGIAHHRWPGSNQYQGNP
VNAVSADSGVVIYAGIMGSLNSGYGRIVIVDHGGGYSTWYAHLNSILVSEGEEVSRGQPVGLIGSTGSSTGPHLHFEVRK
NDNPQNPLEYLN
>Mature_412_residues
MNNFKCSSIKHRRDRQFIFFSLIAVFILTNIVITEASSEDEDIQEKIQEIEQERQSLESEMDELEENIEHLQQQEREVVQ
RIQEIDYRLSQQEQELIELDNEIGETEDQIEKTTEELEQAEEELEEKEEFLGTRMRATYKQGNVSYLEVLFEAQDFIDFL
SRLTYVQSIVDKDLELIAEVEEERDRIQAKKEELEEQKEDLQTLYAEAEEKKQEIEQNRQEQQRLHAELEEQREQEQELL
RQKENEADQLLEAIRDLQSQSGEMVTPIEWPVPDFGRNYITSPFGNRTHPITGRESFHSGLDIGIAHHRWPGSNQYQGNP
VNAVSADSGVVIYAGIMGSLNSGYGRIVIVDHGGGYSTWYAHLNSILVSEGEEVSRGQPVGLIGSTGSSTGPHLHFEVRK
NDNPQNPLEYLN

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=427, Percent_Identity=23.4192037470726, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87081989, Length=130, Percent_Identity=42.3076923076923, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789099, Length=88, Percent_Identity=40.9090909090909, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 47672; Mature: 47672

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFKCSSIKHRRDRQFIFFSLIAVFILTNIVITEASSEDEDIQEKIQEIEQERQSLESE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MDELEENIEHLQQQEREVVQRIQEIDYRLSQQEQELIELDNEIGETEDQIEKTTEELEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EEELEEKEEFLGTRMRATYKQGNVSYLEVLFEAQDFIDFLSRLTYVQSIVDKDLELIAEV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEERDRIQAKKEELEEQKEDLQTLYAEAEEKKQEIEQNRQEQQRLHAELEEQREQEQELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKENEADQLLEAIRDLQSQSGEMVTPIEWPVPDFGRNYITSPFGNRTHPITGRESFHSG
HHHCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
LDIGIAHHRWPGSNQYQGNPVNAVSADSGVVIYAGIMGSLNSGYGRIVIVDHGGGYSTWY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCCCHHHHH
AHLNSILVSEGEEVSRGQPVGLIGSTGSSTGPHLHFEVRKNDNPQNPLEYLN
HHHHHHHHHCCCHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHCC
>Mature Secondary Structure
MNNFKCSSIKHRRDRQFIFFSLIAVFILTNIVITEASSEDEDIQEKIQEIEQERQSLESE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MDELEENIEHLQQQEREVVQRIQEIDYRLSQQEQELIELDNEIGETEDQIEKTTEELEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EEELEEKEEFLGTRMRATYKQGNVSYLEVLFEAQDFIDFLSRLTYVQSIVDKDLELIAEV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEERDRIQAKKEELEEQKEDLQTLYAEAEEKKQEIEQNRQEQQRLHAELEEQREQEQELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKENEADQLLEAIRDLQSQSGEMVTPIEWPVPDFGRNYITSPFGNRTHPITGRESFHSG
HHHCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
LDIGIAHHRWPGSNQYQGNPVNAVSADSGVVIYAGIMGSLNSGYGRIVIVDHGGGYSTWY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCCCHHHHH
AHLNSILVSEGEEVSRGQPVGLIGSTGSSTGPHLHFEVRKNDNPQNPLEYLN
HHHHHHHHHCCCHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]