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The map label for this gene is ctpB [H]

Identifier: 188586802

GI number: 188586802

Start: 2328109

End: 2329539

Strand: Reverse

Name: ctpB [H]

Synonym: Nther_2193

Alternate gene names: 188586802

Gene position: 2329539-2328109 (Counterclockwise)

Preceding gene: 188586803

Following gene: 188586801

Centisome position: 73.59

GC content: 40.67

Gene sequence:

>1431_bases
TTGCGCATACGGACAATTTTACTGATTGTATTTTTGTTAATATTTACTAACCTGGTAACATTTATGGGTGCTAGTGCTTT
TATGGAAGATAATACTCAGAGTCAGGTCAAAGAGAATGCAGATATCTTCGAGGAATTTGACTCAGAAGGTGATTTGGAAT
TATTAGAAGATGTACTTGGCATTTTAGAGAATAAATACCTGGAAGAGGTAGATCGGGGAGAATTAATGGAAGGTGCCCTA
GAAGGCATGCTAGAAACTTTGGATGATCCCCAGACTAACTATTTAACTCCTAGAGATTATCAAGATTTAATGGTTCGAAC
TGAAGGGAGTTATGGCGGTATCGGAATTGAAGTCTTTATGGATGAAGATTATGTGACAATTGTTGCACCTATTTCTGGTA
CACCAGGTGAAGAAAAAGGATTGCGGTCCGGTGACCGAATTATATCCATTGATGGAGATGACATTGTCGGAATAGACCTA
CAAGATGCAGTAGATAAAATGCGAGGAGAACCAGGCTCTACAGTTGAAATAGAGATTGAACGACCTGGCTTGGATGAAAA
CATGGAGTTTGAAATTACAAGACAGGATATTGAGATTGAAACAGTTAACCATGAAATGAAAGAAAATGATCTAGGTTATA
TAGAGATCACTAACTTTTCTCAAACCACAGGGGAGGAATTCAGTGAAGCCATTACGGAGCTTGAACAGGGAGATATGGAA
GGGCTAGTTCTAGACTTACGGGATAATCCAGGTGGTTTACTTAATGCCGCTATAGAAGTGGGACAGGAAATAGTTCCCGC
AGGTCCAATAGTCCATGTGGTAGGACGTCAAGATACATTAGAAACCCATGAATCTTTTGGTGACGGTGTAGATTATCCTA
TGGTGGTTTTGGTAAACCAAAACAGTGCCAGTGCTTCTGAAATCTTGGCAGGTGCCCTGCAGGATACTGAAACTGCTACC
ATTGCCGGTTCAACAACTTTTGGAAAAGCATCAGTGCAAAATGTGGAACCTTTAGCTCATGGCGGTGCCCTTCAATATAC
CATGGCCAAATATCAAACACCCGATGGTCGGGATATCCATGAGGAAGGCCTCAACCCTGATGTAGAGATAGACCCACCTA
AAATTTTGGAACTAACGCGACAGCCTATTAGTACTGATCTATCCATGGGGGATGAAGGAGAAGAAGTTGAAACCTTACAA
TCAATTCTCAAAGAACTTGACTACTTTACTGAAGAAGTTACTGGTGAATTCGATGAACACACCAGAGATGCTCTAGAAAA
ATTCCAGCAGGCCCGTGGTATATCAGCTACAGGTGAAATGGAAGATATGGTGATTCGTGAATTCCATGATATGATTGAGG
AATACTTGGAAGAAGATGACGAAAAGCTAGAGCGCGGTCTAGAAATATTACTTGAAAAAGTAACTGAATAA

Upstream 100 bases:

>100_bases
GATAAAATAAATTTATAAACTCAAAAGTCGGCTTTTAAGGCCGACTTTTTGAGTATTGTAAGATTATTCAGACAATAACT
GGAAGCGGGGGCTGATATAC

Downstream 100 bases:

>100_bases
TAGAGGAAAGTAAGTATATATAATTTAATTCAAAAAGTCGGCTTAGATGCCGGCTTTTTGATTATTTTAGTAGATAGTTG
AGAATTAGCAGGAAAACTGG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal processing protease [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MRIRTILLIVFLLIFTNLVTFMGASAFMEDNTQSQVKENADIFEEFDSEGDLELLEDVLGILENKYLEEVDRGELMEGAL
EGMLETLDDPQTNYLTPRDYQDLMVRTEGSYGGIGIEVFMDEDYVTIVAPISGTPGEEKGLRSGDRIISIDGDDIVGIDL
QDAVDKMRGEPGSTVEIEIERPGLDENMEFEITRQDIEIETVNHEMKENDLGYIEITNFSQTTGEEFSEAITELEQGDME
GLVLDLRDNPGGLLNAAIEVGQEIVPAGPIVHVVGRQDTLETHESFGDGVDYPMVVLVNQNSASASEILAGALQDTETAT
IAGSTTFGKASVQNVEPLAHGGALQYTMAKYQTPDGRDIHEEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQ
SILKELDYFTEEVTGEFDEHTRDALEKFQQARGISATGEMEDMVIREFHDMIEEYLEEDDEKLERGLEILLEKVTE

Sequences:

>Translated_476_residues
MRIRTILLIVFLLIFTNLVTFMGASAFMEDNTQSQVKENADIFEEFDSEGDLELLEDVLGILENKYLEEVDRGELMEGAL
EGMLETLDDPQTNYLTPRDYQDLMVRTEGSYGGIGIEVFMDEDYVTIVAPISGTPGEEKGLRSGDRIISIDGDDIVGIDL
QDAVDKMRGEPGSTVEIEIERPGLDENMEFEITRQDIEIETVNHEMKENDLGYIEITNFSQTTGEEFSEAITELEQGDME
GLVLDLRDNPGGLLNAAIEVGQEIVPAGPIVHVVGRQDTLETHESFGDGVDYPMVVLVNQNSASASEILAGALQDTETAT
IAGSTTFGKASVQNVEPLAHGGALQYTMAKYQTPDGRDIHEEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQ
SILKELDYFTEEVTGEFDEHTRDALEKFQQARGISATGEMEDMVIREFHDMIEEYLEEDDEKLERGLEILLEKVTE
>Mature_476_residues
MRIRTILLIVFLLIFTNLVTFMGASAFMEDNTQSQVKENADIFEEFDSEGDLELLEDVLGILENKYLEEVDRGELMEGAL
EGMLETLDDPQTNYLTPRDYQDLMVRTEGSYGGIGIEVFMDEDYVTIVAPISGTPGEEKGLRSGDRIISIDGDDIVGIDL
QDAVDKMRGEPGSTVEIEIERPGLDENMEFEITRQDIEIETVNHEMKENDLGYIEITNFSQTTGEEFSEAITELEQGDME
GLVLDLRDNPGGLLNAAIEVGQEIVPAGPIVHVVGRQDTLETHESFGDGVDYPMVVLVNQNSASASEILAGALQDTETAT
IAGSTTFGKASVQNVEPLAHGGALQYTMAKYQTPDGRDIHEEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQ
SILKELDYFTEEVTGEFDEHTRDALEKFQQARGISATGEMEDMVIREFHDMIEEYLEEDDEKLERGLEILLEKVTE

Specific function: Involved in the signal transduction pathway leading to the proteolytic activation of the mother cell transcription factor pro-sigma-K during sporulation. The signaling serine protease CtpB triggers pro-sigma-K processing by cleaving the regulatory protein

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Forespore intermembrane space. Note=Is expressed in both the mother cell and forespore compartments but that synthesis in the forespore is both necessary and sufficient for the proper timing of pro-sigma-K processing [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=309, Percent_Identity=31.7152103559871, Blast_Score=143, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41; PF01471 PG_binding_1 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52913; Mature: 52913

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRTILLIVFLLIFTNLVTFMGASAFMEDNTQSQVKENADIFEEFDSEGDLELLEDVLG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ILENKYLEEVDRGELMEGALEGMLETLDDPQTNYLTPRDYQDLMVRTEGSYGGIGIEVFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEECCCCCCEEEEEEE
DEDYVTIVAPISGTPGEEKGLRSGDRIISIDGDDIVGIDLQDAVDKMRGEPGSTVEIEIE
CCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCCCEEEEEEE
RPGLDENMEFEITRQDIEIETVNHEMKENDLGYIEITNFSQTTGEEFSEAITELEQGDME
CCCCCCCCEEEEEECCEEEEECCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCC
GLVLDLRDNPGGLLNAAIEVGQEIVPAGPIVHVVGRQDTLETHESFGDGVDYPMVVLVNQ
EEEEEECCCCCHHHHHHHHHCHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCEEEEEEC
NSASASEILAGALQDTETATIAGSTTFGKASVQNVEPLAHGGALQYTMAKYQTPDGRDIH
CCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCCHHHCCCCEEEEHHHCCCCCCCCHH
EEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQSILKELDYFTEEVTGEFDEH
HCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
TRDALEKFQQARGISATGEMEDMVIREFHDMIEEYLEEDDEKLERGLEILLEKVTE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIRTILLIVFLLIFTNLVTFMGASAFMEDNTQSQVKENADIFEEFDSEGDLELLEDVLG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ILENKYLEEVDRGELMEGALEGMLETLDDPQTNYLTPRDYQDLMVRTEGSYGGIGIEVFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEECCCCCCEEEEEEE
DEDYVTIVAPISGTPGEEKGLRSGDRIISIDGDDIVGIDLQDAVDKMRGEPGSTVEIEIE
CCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCCCEEEEEEE
RPGLDENMEFEITRQDIEIETVNHEMKENDLGYIEITNFSQTTGEEFSEAITELEQGDME
CCCCCCCCEEEEEECCEEEEECCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCC
GLVLDLRDNPGGLLNAAIEVGQEIVPAGPIVHVVGRQDTLETHESFGDGVDYPMVVLVNQ
EEEEEECCCCCHHHHHHHHHCHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCEEEEEEC
NSASASEILAGALQDTETATIAGSTTFGKASVQNVEPLAHGGALQYTMAKYQTPDGRDIH
CCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCCHHHCCCCEEEEHHHCCCCCCCCHH
EEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQSILKELDYFTEEVTGEFDEH
HCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
TRDALEKFQQARGISATGEMEDMVIREFHDMIEEYLEEDDEKLERGLEILLEKVTE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9570401; 9384377 [H]