| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188586786
Identifier: 188586786
GI number: 188586786
Start: 2301528
End: 2303615
Strand: Reverse
Name: 188586786
Synonym: Nther_2177
Alternate gene names: NA
Gene position: 2303615-2301528 (Counterclockwise)
Preceding gene: 188586788
Following gene: 188586785
Centisome position: 72.77
GC content: 36.83
Gene sequence:
>2088_bases ATGAGAAAATTTTCATTTTATGTAATTATAACTATTATTTTTATACCTGTACTAATTGTTTCTAACTCATCTGTAGCTAA AGGAGAGGAAGGAACTAATTACCACGATAACATGGAGTATCATTTAGACTTTTTAATAGATGAAGAATTGGCAGGAAGAA AAGTGGGTACTGAGGGAAATGAAACAACCGTAAAGTACTTGGAAGATAAGTTTAAGGAATATGGTCTTAAATCACCAGAA GACCTGGGATATCCCAGGTTTGAAGGCTATCAACATGAAATTAATACACCCCTAGTTCGATGGGGTGGTGAACCTACTTT TGAAATCGAACTAGAAGATGAAACAAAGGAACTAGATTACAGGACAGATTATCGGCCGCGGAAGGACGATTATAGTGCAG GTGGAAATTATCAGGGAGAATTTAAGCATCTTGAAGAATATCAACAGATGTTTGAGATACGGGACGATTTAGAAGGAAGT GCGGTGTTGGTTGATTATTATGGTTCTGATTTTGAAGAACGGGGTTATGATGAATATGAAATGGATAAGTGGTTGGTACA TCAAGGGGCAGAAGTTGTGATATACCCTGAAGAGGAGGATATGATATCTGAACGCAATTTAGAAATTGGGGAGAAAAAAA CTTTTATTCATTCGCGCGGTATTATAAAAATTGGAGTTACTCCAAAACTGTTTCAAGAACTGGTGGAAGGTCAAGATGAA AGTTTCTTAAATGTTGAGATCCCCTTAGAAATTGATGAAGAGGCTGCAGCTTCTAATGTTATGGGAGTAATGCCTGGCAA AGATGAATTATTGGATGGTTACATTATGTTAGCAGTTTCCCTTGATGGTTATGGTCGAGATGGAGAAGGTAATTATGATC CAGCAGTTTCCGAAAGTGTTATACCTCAAGCGATTATGCTAGAAACTATCAGAGAATTAACAGAGTCAGATTTTAAGCCA GATAAAACTGTAGTTTTTGCAGCATTTAATGCAGAACAATTAGGTAATATGGGATCCCGGGAATACTTGGATGATTCACC TTTTCCCGGGGAACTAAAAGAAGTCATTTATCTAGAAAATATATTTTACGGTGAAAATAGTGAAAAACAGTTGCATGTAA ATACTTTTGAAAGCCCCAGGGCCGAGAGAATGCCATCAGCTCGATTGATGAGAAAAATGGCTGATGTTGGGGATGACTTT AATATTGATGTTGAAAAGGACCATCAGACTATGGTGGGTTCTCATCATGTCTTCAGACATAGTGGGATGATTGCAGTATC CCTATCAGGCGAACTAAGTGACCCCAATCTGGAAACTGATAAAGATGGTTTGGAAATAAGACACGGTGATTTGGAATTAG AGCATGACGAACTAAATACATTGGTAGAGTACAATAAAGCTGCCCTTGAGACTATAACTGAACAGGATGTTTTAAAGGAA ATCCGGGGAGGCGCGTCAATTGCCTTAATCCCCCTGGCCGGCCTAGCAATTGCTGTTCCTGTAACTAGGGGTAAAAATGC TAAAAAATCAGTATTAATAACTTTAGCAGTAGTAACTGTATTTATCTTTGCTACGGCTCTTCACTCCATGCATTATCAGC TCGATAATACATGGCAGCTGCCAGAGGAGATAAGCCTTGATCCTTTTATACTGCTTAACGGGTTGGCCTTGGCTATACCT TCGGTAATGGCAATGTTTTTCTGGACCTGGCTTTATTATATTCCCAGTGTAATAGCCGCAGCAATTTCTAATTGGTATAT TACCAGATTTCAAATAATTATAACTTCAGCTGTACTGTACTTCTGTAATGTTCATTTACTGATTAACAATTATTCACACT ACTATAATGCTTTATATCCCAATTTTCTTCAGTTTAGTTATGTAGAATACGTGCTACCTTTAATAGTACTAGGAATATCC TTATTGATATTTACATTGATTAAAAAAGTAACTGATTTGGATGGATTGCCCTTATTGATGTTATTGATTTTGATTAATTA TGTTTTACTAATTTATTTAATCGCGCCTCACTTTATGTCACAGGAAGTTATAGAGCTCAGGCGTAACAATCAAACTATCA CTTATTAA
Upstream 100 bases:
>100_bases AGCGCCCAAACATTCAGAAAATTCTATTGACAAAAAACTAATACCATCGTAGTATAAAGTCAAATCTTTATTATGGAAAA AAATAGCTGGGGGGAATAAT
Downstream 100 bases:
>100_bases TAATGTTGTTGATACTGTAAGATTTTTAGTTATCAAGATTCTACTTTAATACAGCCTTGTAAAAAAACTATGATTAATTC TAATACCAGCAGGATTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MRKFSFYVIITIIFIPVLIVSNSSVAKGEEGTNYHDNMEYHLDFLIDEELAGRKVGTEGNETTVKYLEDKFKEYGLKSPE DLGYPRFEGYQHEINTPLVRWGGEPTFEIELEDETKELDYRTDYRPRKDDYSAGGNYQGEFKHLEEYQQMFEIRDDLEGS AVLVDYYGSDFEERGYDEYEMDKWLVHQGAEVVIYPEEEDMISERNLEIGEKKTFIHSRGIIKIGVTPKLFQELVEGQDE SFLNVEIPLEIDEEAAASNVMGVMPGKDELLDGYIMLAVSLDGYGRDGEGNYDPAVSESVIPQAIMLETIRELTESDFKP DKTVVFAAFNAEQLGNMGSREYLDDSPFPGELKEVIYLENIFYGENSEKQLHVNTFESPRAERMPSARLMRKMADVGDDF NIDVEKDHQTMVGSHHVFRHSGMIAVSLSGELSDPNLETDKDGLEIRHGDLELEHDELNTLVEYNKAALETITEQDVLKE IRGGASIALIPLAGLAIAVPVTRGKNAKKSVLITLAVVTVFIFATALHSMHYQLDNTWQLPEEISLDPFILLNGLALAIP SVMAMFFWTWLYYIPSVIAAAISNWYITRFQIIITSAVLYFCNVHLLINNYSHYYNALYPNFLQFSYVEYVLPLIVLGIS LLIFTLIKKVTDLDGLPLLMLLILINYVLLIYLIAPHFMSQEVIELRRNNQTITY
Sequences:
>Translated_695_residues MRKFSFYVIITIIFIPVLIVSNSSVAKGEEGTNYHDNMEYHLDFLIDEELAGRKVGTEGNETTVKYLEDKFKEYGLKSPE DLGYPRFEGYQHEINTPLVRWGGEPTFEIELEDETKELDYRTDYRPRKDDYSAGGNYQGEFKHLEEYQQMFEIRDDLEGS AVLVDYYGSDFEERGYDEYEMDKWLVHQGAEVVIYPEEEDMISERNLEIGEKKTFIHSRGIIKIGVTPKLFQELVEGQDE SFLNVEIPLEIDEEAAASNVMGVMPGKDELLDGYIMLAVSLDGYGRDGEGNYDPAVSESVIPQAIMLETIRELTESDFKP DKTVVFAAFNAEQLGNMGSREYLDDSPFPGELKEVIYLENIFYGENSEKQLHVNTFESPRAERMPSARLMRKMADVGDDF NIDVEKDHQTMVGSHHVFRHSGMIAVSLSGELSDPNLETDKDGLEIRHGDLELEHDELNTLVEYNKAALETITEQDVLKE IRGGASIALIPLAGLAIAVPVTRGKNAKKSVLITLAVVTVFIFATALHSMHYQLDNTWQLPEEISLDPFILLNGLALAIP SVMAMFFWTWLYYIPSVIAAAISNWYITRFQIIITSAVLYFCNVHLLINNYSHYYNALYPNFLQFSYVEYVLPLIVLGIS LLIFTLIKKVTDLDGLPLLMLLILINYVLLIYLIAPHFMSQEVIELRRNNQTITY >Mature_695_residues MRKFSFYVIITIIFIPVLIVSNSSVAKGEEGTNYHDNMEYHLDFLIDEELAGRKVGTEGNETTVKYLEDKFKEYGLKSPE DLGYPRFEGYQHEINTPLVRWGGEPTFEIELEDETKELDYRTDYRPRKDDYSAGGNYQGEFKHLEEYQQMFEIRDDLEGS AVLVDYYGSDFEERGYDEYEMDKWLVHQGAEVVIYPEEEDMISERNLEIGEKKTFIHSRGIIKIGVTPKLFQELVEGQDE SFLNVEIPLEIDEEAAASNVMGVMPGKDELLDGYIMLAVSLDGYGRDGEGNYDPAVSESVIPQAIMLETIRELTESDFKP DKTVVFAAFNAEQLGNMGSREYLDDSPFPGELKEVIYLENIFYGENSEKQLHVNTFESPRAERMPSARLMRKMADVGDDF NIDVEKDHQTMVGSHHVFRHSGMIAVSLSGELSDPNLETDKDGLEIRHGDLELEHDELNTLVEYNKAALETITEQDVLKE IRGGASIALIPLAGLAIAVPVTRGKNAKKSVLITLAVVTVFIFATALHSMHYQLDNTWQLPEEISLDPFILLNGLALAIP SVMAMFFWTWLYYIPSVIAAAISNWYITRFQIIITSAVLYFCNVHLLINNYSHYYNALYPNFLQFSYVEYVLPLIVLGIS LLIFTLIKKVTDLDGLPLLMLLILINYVLLIYLIAPHFMSQEVIELRRNNQTITY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79322; Mature: 79322
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFSFYVIITIIFIPVLIVSNSSVAKGEEGTNYHDNMEYHLDFLIDEELAGRKVGTEGN CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHCCCCCCCCCC ETTVKYLEDKFKEYGLKSPEDLGYPRFEGYQHEINTPLVRWGGEPTFEIELEDETKELDY HHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHCCCCEEEECCCCEEEEEECCCCCCCCC RTDYRPRKDDYSAGGNYQGEFKHLEEYQQMFEIRDDLEGSAVLVDYYGSDFEERGYDEYE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCHHH MDKWLVHQGAEVVIYPEEEDMISERNLEIGEKKTFIHSRGIIKIGVTPKLFQELVEGQDE HHHHHHHCCCEEEEECCCHHHHHHCCCCCCCHHEEEECCCEEEECCCHHHHHHHHCCCCC SFLNVEIPLEIDEEAAASNVMGVMPGKDELLDGYIMLAVSLDGYGRDGEGNYDPAVSESV CEEEEEECEEECCHHHHCCCEECCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHH IPQAIMLETIRELTESDFKPDKTVVFAAFNAEQLGNMGSREYLDDSPFPGELKEVIYLEN CHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH IFYGENSEKQLHVNTFESPRAERMPSARLMRKMADVGDDFNIDVEKDHQTMVGSHHVFRH EEECCCCCCEEEEECCCCCCHHCCCHHHHHHHHHHCCCCCCEEECCCCHHHHCCCCEEEC SGMIAVSLSGELSDPNLETDKDGLEIRHGDLELEHDELNTLVEYNKAALETITEQDVLKE CCEEEEEECCCCCCCCCCCCCCCCEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IRGGASIALIPLAGLAIAVPVTRGKNAKKSVLITLAVVTVFIFATALHSMHYQLDNTWQL HCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PEEISLDPFILLNGLALAIPSVMAMFFWTWLYYIPSVIAAAISNWYITRFQIIITSAVLY CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCNVHLLINNYSHYYNALYPNFLQFSYVEYVLPLIVLGISLLIFTLIKKVTDLDGLPLLM HHHHHHEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LLILINYVLLIYLIAPHFMSQEVIELRRNNQTITY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKFSFYVIITIIFIPVLIVSNSSVAKGEEGTNYHDNMEYHLDFLIDEELAGRKVGTEGN CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHCCCCCCCCCC ETTVKYLEDKFKEYGLKSPEDLGYPRFEGYQHEINTPLVRWGGEPTFEIELEDETKELDY HHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHCCCCEEEECCCCEEEEEECCCCCCCCC RTDYRPRKDDYSAGGNYQGEFKHLEEYQQMFEIRDDLEGSAVLVDYYGSDFEERGYDEYE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCHHH MDKWLVHQGAEVVIYPEEEDMISERNLEIGEKKTFIHSRGIIKIGVTPKLFQELVEGQDE HHHHHHHCCCEEEEECCCHHHHHHCCCCCCCHHEEEECCCEEEECCCHHHHHHHHCCCCC SFLNVEIPLEIDEEAAASNVMGVMPGKDELLDGYIMLAVSLDGYGRDGEGNYDPAVSESV CEEEEEECEEECCHHHHCCCEECCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHH IPQAIMLETIRELTESDFKPDKTVVFAAFNAEQLGNMGSREYLDDSPFPGELKEVIYLEN CHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH IFYGENSEKQLHVNTFESPRAERMPSARLMRKMADVGDDFNIDVEKDHQTMVGSHHVFRH EEECCCCCCEEEEECCCCCCHHCCCHHHHHHHHHHCCCCCCEEECCCCHHHHCCCCEEEC SGMIAVSLSGELSDPNLETDKDGLEIRHGDLELEHDELNTLVEYNKAALETITEQDVLKE CCEEEEEECCCCCCCCCCCCCCCCEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IRGGASIALIPLAGLAIAVPVTRGKNAKKSVLITLAVVTVFIFATALHSMHYQLDNTWQL HCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PEEISLDPFILLNGLALAIPSVMAMFFWTWLYYIPSVIAAAISNWYITRFQIIITSAVLY CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCNVHLLINNYSHYYNALYPNFLQFSYVEYVLPLIVLGISLLIFTLIKKVTDLDGLPLLM HHHHHHEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LLILINYVLLIYLIAPHFMSQEVIELRRNNQTITY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA