| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586773
Identifier: 188586773
GI number: 188586773
Start: 2292203
End: 2292811
Strand: Reverse
Name: 188586773
Synonym: Nther_2164
Alternate gene names: NA
Gene position: 2292811-2292203 (Counterclockwise)
Preceding gene: 188586775
Following gene: 188586771
Centisome position: 72.43
GC content: 38.1
Gene sequence:
>609_bases ATGAATCAACATTATAGTGTGGGGATTCTGATTTTTGATCAGGTGGAGGTTCTAGATTTTACTGGACCTTATGAGGTGTT TTCAGTCACTAGATTTAAAGGTCAATCCTATGATTCTGAAGATAGGACTCCATTTCAAGTGGATACTATTTCGGAAACAG GTGAGCAAGTAGAGTGTCGTCATGGTCTTAAAGTACAGCCCGACAGATCTTTTCAGACTAGTGGACAATATGACATATTA GTAATTCCGGGTGGATTAGGTGTGAGATGGCAAGTGAAAAATTCAAAATTATTAGACTGGATCAGAAAGCAAAATGAAGG GACAATGTTAACAACTTCTGTCTGCACTGGTTCAATACTACTTGCCGAAGCTGGACTTTTGAAGGGCAAAAAAGCAACAA CTCATCATGAAAATTTAACAAAGCTAGCAAGCTCTTATCCAGAGGTTACTGTAGTACGAGATCAGAAAGTTGTGGATGAA GGTAATTTCATAACTTCTGCCGGGATTTCCGCTGGGATAAATATGGCTTTTCAAGTAGTTGAAAGGCTGTTTGGGGCTGA AATTTCTCAACAAACCCAGGAATTTATGGAATATAATCTTAAACAATAA
Upstream 100 bases:
>100_bases AGTGTATTTAAATCCACTGATAGCTTTTGTAAAAAAATGATATAATATACTATGGTAGTTATAACCAATATTATAGCTTA TAGCTGAAAGGGGATATTAT
Downstream 100 bases:
>100_bases TTTTAATTTTGATATATCAATACCACCACTAGCACAATATCAGAGACATTTGCTTGTTGACATTTTGCTTATTTAAATAT TGAGCCAAACAACACTGTAA
Product: ThiJ/PfpI domain protein
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; AraC Family Transcription Regulator; Intracellular Protease/Amidase; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator DarR; Hydratase; AraC Family Regulatory Helix-Turn-Helix Protein; ThiH/PfpI Family Amidotransferase; ADPA-Family Transcriptional Regulator; ADPA Family Transcriptional Regulator; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Intracellular Protease/Amidase Protein; AraC-Family Transcriptional Regulator; Regulatory Protein; DJ-1/PfpI Superfamily Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; ThiJ Family Protein; Transcription Regulator Protein Thij/Pfpi; Isonitrile Hydratase; Fis Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNQHYSVGILIFDQVEVLDFTGPYEVFSVTRFKGQSYDSEDRTPFQVDTISETGEQVECRHGLKVQPDRSFQTSGQYDIL VIPGGLGVRWQVKNSKLLDWIRKQNEGTMLTTSVCTGSILLAEAGLLKGKKATTHHENLTKLASSYPEVTVVRDQKVVDE GNFITSAGISAGINMAFQVVERLFGAEISQQTQEFMEYNLKQ
Sequences:
>Translated_202_residues MNQHYSVGILIFDQVEVLDFTGPYEVFSVTRFKGQSYDSEDRTPFQVDTISETGEQVECRHGLKVQPDRSFQTSGQYDIL VIPGGLGVRWQVKNSKLLDWIRKQNEGTMLTTSVCTGSILLAEAGLLKGKKATTHHENLTKLASSYPEVTVVRDQKVVDE GNFITSAGISAGINMAFQVVERLFGAEISQQTQEFMEYNLKQ >Mature_202_residues MNQHYSVGILIFDQVEVLDFTGPYEVFSVTRFKGQSYDSEDRTPFQVDTISETGEQVECRHGLKVQPDRSFQTSGQYDIL VIPGGLGVRWQVKNSKLLDWIRKQNEGTMLTTSVCTGSILLAEAGLLKGKKATTHHENLTKLASSYPEVTVVRDQKVVDE GNFITSAGISAGINMAFQVVERLFGAEISQQTQEFMEYNLKQ
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24653499, Length=151, Percent_Identity=32.4503311258278, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI28571932, Length=151, Percent_Identity=32.4503311258278, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22604; Mature: 22604
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQHYSVGILIFDQVEVLDFTGPYEVFSVTRFKGQSYDSEDRTPFQVDTISETGEQVECR CCCCEEEEEEEEECEEEEECCCCHHEEEEEEECCCCCCCCCCCCEEEECCCCCCCEEHHC HGLKVQPDRSFQTSGQYDILVIPGGLGVRWQVKNSKLLDWIRKQNEGTMLTTSVCTGSIL CCCEECCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCEEEEHHCCCEEE LAEAGLLKGKKATTHHENLTKLASSYPEVTVVRDQKVVDEGNFITSAGISAGINMAFQVV EECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCEEECCCCEEEECCCHHHHHHHHHHH ERLFGAEISQQTQEFMEYNLKQ HHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQHYSVGILIFDQVEVLDFTGPYEVFSVTRFKGQSYDSEDRTPFQVDTISETGEQVECR CCCCEEEEEEEEECEEEEECCCCHHEEEEEEECCCCCCCCCCCCEEEECCCCCCCEEHHC HGLKVQPDRSFQTSGQYDILVIPGGLGVRWQVKNSKLLDWIRKQNEGTMLTTSVCTGSIL CCCEECCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCEEEEHHCCCEEE LAEAGLLKGKKATTHHENLTKLASSYPEVTVVRDQKVVDEGNFITSAGISAGINMAFQVV EECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCEEECCCCEEEECCCHHHHHHHHHHH ERLFGAEISQQTQEFMEYNLKQ HHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA