| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is mgm [H]
Identifier: 188586766
GI number: 188586766
Start: 2282487
End: 2284337
Strand: Reverse
Name: mgm [H]
Synonym: Nther_2157
Alternate gene names: 188586766
Gene position: 2284337-2282487 (Counterclockwise)
Preceding gene: 188586767
Following gene: 188586765
Centisome position: 72.16
GC content: 41.11
Gene sequence:
>1851_bases ATGAGTAGTGAAAGGCCAAATACTAAGCGAATTATTCGTGAAGATATTGACAGAATAAGAGCTTATGAAAAGGCTTTTGA TGTGGATATGCCCTATATTGGCGAGGACGGAGAAATTAAAAACTTGCCAGACCCATTTCCTAGAGAAGTTAATGGAGTAG TTAGAAGCGGTTACCGCTTAACAGAACTAGGGAGACAGGCTGAAAAAGAGAAAATGCCAGTTATGAACCCAATTTTAGGC AGGAATACAGCTGAAGAAACCTTCAAAGAATCCAAGATTATGTACGACAAAGCTGAAGAACTAGGCGTTCAAATGTTTCA TTTCGTTCACTCTGAGGCCACTCGGCATATAGATCCTTTAGATGGAATAGAGTTGGTTGAACAGTCACGTGGTAAAGGTG GAATTACACCTAAAGGTGAAAGAGAGTATGTTCAAATGGGTGGTGGAAGTGTCCATCCCATGAGGATAAATGCAACTGGG GACACTCCTCATATTTCGATTTTGAATTCATTGATGGCAGGTTTTGATGGAACAGATATTGGACCAGTTATTCACGTTCA TTTCGGAGGCCGAGGAATTCATGACTACAAGACTAAGGTGACTAACAGTTACAAAGCAATTCAAATTTGTGCAGAAAATA ATATCTTTGTTCAATTGGATTCACACAAGCATGTAAATAATATTTTAGGTACTGACGGAATGGCCCTGGCCATGTGTTTA TTATCCGAAGGTTTGGCAGTTAAAGCTGGGTTGGATAGAGCTTTAAGTGCTATTCAGATGAACGTAGGTGGTATCAACCT GTTAGCTGATATAGCAGTAATGAAAGCATTTAAAGAGACGACCTGGAGTGAGTTTATTATCGTTGTACCTGAAACGTTCC AGGATCCACCAGCAGATTTTAGGGCAGAGCAGGCTCACTTTGCTAGAATGGCAGTCAGTGCCAAATTGGGAGAAGCTAAC TTTTACAGGCCTAAAGCAGCAGAATCAGTAGGTATTCCAACAGGCGAATCAATGTCAAAGGCCATTTGGGCATCTCAGAA TGTCTTTGAGAGCATGTATCAAACTGAGATAAATGATCCCTTTATCGAGAAGAGAAAAGAAGAAATCCAAACAGAAGCCA TGGCAGTACTATCAGCAGCTCTCAAAATGGATAGAATGTTATCGCCTGAAGAAATCACCGAAGAATTTTGGCAACAGTTT GATTCAGAAGAGCTGATAGATCTTATTGTCACTGCTGGAAAGAGCGGAGTTCTAGATACACCAAGAGCAGGTGGATGGGA TCTACAGAGATACGTAAAAACTCATAGGGATCAGGATGGAATACGCAGATATATTCCGGGTTGTACACCTCAAGGTGTAG ATGAGCAGTATATGCCGATAGCGAAAGAAGATGTAGAACCACCTAAAGAAACTGAAGTCATCCACGATGAAAAAATAGTC CTTGCTACAGTAGGCGCGGATGCCCATGTAATTGGTATAAACAAGGTTAAAGAAGCATGTGAAGAAGCCGGTTACGAAGT TATTTTCTTAAGAGGAATGAACTTACCAGAGGCGGTAGCCGAAGTTGCTGCCGAAACCCAAGCGAAATTGGTGGGAGTCA GTAATTTACTTGGTCTAGGTGGCTCATTGTATCCGCGAGTTGATCAAAGGCTAAGAGAACTTGGTTTAAGAGATGAAGTT CACTTGATGGCCGGAGGCCGAATAGCGGAAAAAGAAGAGGAACACAAAGAGTACGAAGAAAGAATCGAAAAAGAAGGTCC TGGCTTTTTAGGTGTAGATGTTTTCTTTGGACCTGGTAGTTCTTATGAAGAGATTGTAGATTGGATTAATACAAAACTCG GCAATAAATAA
Upstream 100 bases:
>100_bases TTCCAACTAGAGGAGCTATCACAAGTCACCATGGAAACACTGGAAGCCGGTGGACTGATCAACAAAGTCAAAATGATATT AAATATAAGAGGTGATATGA
Downstream 100 bases:
>100_bases GAAAAGAGATAAGGAACTGTTAAGTTATTAAATTCCTTCCGGTAACTATTTATCAATCGTTTCAAAGGCCGGAACTAAGG AGGGGTTAGTGTGGATCAGG
Product: 2-methyleneglutarate mutase
Products: NA
Alternate protein names: Alpha-methyleneglutarate mutase [H]
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MSSERPNTKRIIREDIDRIRAYEKAFDVDMPYIGEDGEIKNLPDPFPREVNGVVRSGYRLTELGRQAEKEKMPVMNPILG RNTAEETFKESKIMYDKAEELGVQMFHFVHSEATRHIDPLDGIELVEQSRGKGGITPKGEREYVQMGGGSVHPMRINATG DTPHISILNSLMAGFDGTDIGPVIHVHFGGRGIHDYKTKVTNSYKAIQICAENNIFVQLDSHKHVNNILGTDGMALAMCL LSEGLAVKAGLDRALSAIQMNVGGINLLADIAVMKAFKETTWSEFIIVVPETFQDPPADFRAEQAHFARMAVSAKLGEAN FYRPKAAESVGIPTGESMSKAIWASQNVFESMYQTEINDPFIEKRKEEIQTEAMAVLSAALKMDRMLSPEEITEEFWQQF DSEELIDLIVTAGKSGVLDTPRAGGWDLQRYVKTHRDQDGIRRYIPGCTPQGVDEQYMPIAKEDVEPPKETEVIHDEKIV LATVGADAHVIGINKVKEACEEAGYEVIFLRGMNLPEAVAEVAAETQAKLVGVSNLLGLGGSLYPRVDQRLRELGLRDEV HLMAGGRIAEKEEEHKEYEERIEKEGPGFLGVDVFFGPGSSYEEIVDWINTKLGNK
Sequences:
>Translated_616_residues MSSERPNTKRIIREDIDRIRAYEKAFDVDMPYIGEDGEIKNLPDPFPREVNGVVRSGYRLTELGRQAEKEKMPVMNPILG RNTAEETFKESKIMYDKAEELGVQMFHFVHSEATRHIDPLDGIELVEQSRGKGGITPKGEREYVQMGGGSVHPMRINATG DTPHISILNSLMAGFDGTDIGPVIHVHFGGRGIHDYKTKVTNSYKAIQICAENNIFVQLDSHKHVNNILGTDGMALAMCL LSEGLAVKAGLDRALSAIQMNVGGINLLADIAVMKAFKETTWSEFIIVVPETFQDPPADFRAEQAHFARMAVSAKLGEAN FYRPKAAESVGIPTGESMSKAIWASQNVFESMYQTEINDPFIEKRKEEIQTEAMAVLSAALKMDRMLSPEEITEEFWQQF DSEELIDLIVTAGKSGVLDTPRAGGWDLQRYVKTHRDQDGIRRYIPGCTPQGVDEQYMPIAKEDVEPPKETEVIHDEKIV LATVGADAHVIGINKVKEACEEAGYEVIFLRGMNLPEAVAEVAAETQAKLVGVSNLLGLGGSLYPRVDQRLRELGLRDEV HLMAGGRIAEKEEEHKEYEERIEKEGPGFLGVDVFFGPGSSYEEIVDWINTKLGNK >Mature_615_residues SSERPNTKRIIREDIDRIRAYEKAFDVDMPYIGEDGEIKNLPDPFPREVNGVVRSGYRLTELGRQAEKEKMPVMNPILGR NTAEETFKESKIMYDKAEELGVQMFHFVHSEATRHIDPLDGIELVEQSRGKGGITPKGEREYVQMGGGSVHPMRINATGD TPHISILNSLMAGFDGTDIGPVIHVHFGGRGIHDYKTKVTNSYKAIQICAENNIFVQLDSHKHVNNILGTDGMALAMCLL SEGLAVKAGLDRALSAIQMNVGGINLLADIAVMKAFKETTWSEFIIVVPETFQDPPADFRAEQAHFARMAVSAKLGEANF YRPKAAESVGIPTGESMSKAIWASQNVFESMYQTEINDPFIEKRKEEIQTEAMAVLSAALKMDRMLSPEEITEEFWQQFD SEELIDLIVTAGKSGVLDTPRAGGWDLQRYVKTHRDQDGIRRYIPGCTPQGVDEQYMPIAKEDVEPPKETEVIHDEKIVL ATVGADAHVIGINKVKEACEEAGYEVIFLRGMNLPEAVAEVAAETQAKLVGVSNLLGLGGSLYPRVDQRLRELGLRDEVH LMAGGRIAEKEEEHKEYEERIEKEGPGFLGVDVFFGPGSSYEEIVDWINTKLGNK
Specific function: Involved in the fermentation of nicotinate to ammonia, propionate, acetate and carbon dioxide [H]
COG id: COG2185
COG function: function code I; Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR006158 [H]
Pfam domain/function: PF02310 B12-binding [H]
EC number: =5.4.99.4 [H]
Molecular weight: Translated: 68495; Mature: 68363
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSERPNTKRIIREDIDRIRAYEKAFDVDMPYIGEDGEIKNLPDPFPREVNGVVRSGYRL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHH TELGRQAEKEKMPVMNPILGRNTAEETFKESKIMYDKAEELGVQMFHFVHSEATRHIDPL HHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGIELVEQSRGKGGITPKGEREYVQMGGGSVHPMRINATGDTPHISILNSLMAGFDGTDI HHHHHHHHCCCCCCCCCCCCCHHHCCCCCEECEEEEECCCCCCHHHHHHHHHHCCCCCCC GPVIHVHFGGRGIHDYKTKVTNSYKAIQICAENNIFVQLDSHKHVNNILGTDGMALAMCL CCEEEEEECCCCCCHHHHHHCCCCEEEEEEECCCEEEEECCCCHHHHHHCCCHHHHHHHH LSEGLAVKAGLDRALSAIQMNVGGINLLADIAVMKAFKETTWSEFIIVVPETFQDPPADF HHCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCH RAEQAHFARMAVSAKLGEANFYRPKAAESVGIPTGESMSKAIWASQNVFESMYQTEINDP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH FIEKRKEEIQTEAMAVLSAALKMDRMLSPEEITEEFWQQFDSEELIDLIVTAGKSGVLDT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC PRAGGWDLQRYVKTHRDQDGIRRYIPGCTPQGVDEQYMPIAKEDVEPPKETEVIHDEKIV CCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEE LATVGADAHVIGINKVKEACEEAGYEVIFLRGMNLPEAVAEVAAETQAKLVGVSNLLGLG EEEECCCEEEEEHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC GSLYPRVDQRLRELGLRDEVHLMAGGRIAEKEEEHKEYEERIEKEGPGFLGVDVFFGPGS CCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC SYEEIVDWINTKLGNK CHHHHHHHHHHHCCCC >Mature Secondary Structure SSERPNTKRIIREDIDRIRAYEKAFDVDMPYIGEDGEIKNLPDPFPREVNGVVRSGYRL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHH TELGRQAEKEKMPVMNPILGRNTAEETFKESKIMYDKAEELGVQMFHFVHSEATRHIDPL HHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGIELVEQSRGKGGITPKGEREYVQMGGGSVHPMRINATGDTPHISILNSLMAGFDGTDI HHHHHHHHCCCCCCCCCCCCCHHHCCCCCEECEEEEECCCCCCHHHHHHHHHHCCCCCCC GPVIHVHFGGRGIHDYKTKVTNSYKAIQICAENNIFVQLDSHKHVNNILGTDGMALAMCL CCEEEEEECCCCCCHHHHHHCCCCEEEEEEECCCEEEEECCCCHHHHHHCCCHHHHHHHH LSEGLAVKAGLDRALSAIQMNVGGINLLADIAVMKAFKETTWSEFIIVVPETFQDPPADF HHCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCH RAEQAHFARMAVSAKLGEANFYRPKAAESVGIPTGESMSKAIWASQNVFESMYQTEINDP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH FIEKRKEEIQTEAMAVLSAALKMDRMLSPEEITEEFWQQFDSEELIDLIVTAGKSGVLDT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC PRAGGWDLQRYVKTHRDQDGIRRYIPGCTPQGVDEQYMPIAKEDVEPPKETEVIHDEKIV CCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEE LATVGADAHVIGINKVKEACEEAGYEVIFLRGMNLPEAVAEVAAETQAKLVGVSNLLGLG EEEECCCEEEEEHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC GSLYPRVDQRLRELGLRDEVHLMAGGRIAEKEEEHKEYEERIEKEGPGFLGVDVFFGPGS CCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC SYEEIVDWINTKLGNK CHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168499 [H]