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The map label for this gene is ysaA [C]

Identifier: 188586666

GI number: 188586666

Start: 2174262

End: 2174711

Strand: Reverse

Name: ysaA [C]

Synonym: Nther_2056

Alternate gene names: 188586666

Gene position: 2174711-2174262 (Counterclockwise)

Preceding gene: 188586667

Following gene: 188586665

Centisome position: 68.7

GC content: 42.89

Gene sequence:

>450_bases
ATGGCTATCCGAAAATTAATTGCAAGTTTCGATCTTTGTACCGGTTGTGAAATCTGTACATTGGTCTGTTCCAGGCGATT
GGCCGGAGGTTATAATCCACGTTTTGCCCGGCTACGTCTTGAATCAAAAATGGATGCTTTAGTATCAGATCCGATAGTCT
GTAATCAATGTGACAATGCATTCTGTGAAAAAGTATGTCCCGTATCAGCTATAAAACGGGAAAACGGAATCCCTGTCGTC
GTACAAGATGAATGTATCGGATGCGGCCAATGCCAAAAGTATTGCCCTCGAGATGTAATTGTGATGATGGACAAAAAAGC
TTCCAAATGTGATCTCTGTGGTGGAGACCCCCTTTGTGTCAAAAATTGTCCCACAGGGGCGTTAACCTATTGTGATCATG
GAGACTGTGATCATGGAGAGTCTGGAGAAAAAAGGGGTGAAGTTAAATGA

Upstream 100 bases:

>100_bases
AGGCCTTTTAATGCAATTGTCAAAAGGCCTTTTTTTATATACAATGTATTCAGTCTGTTCAGTAAAAACTTTATAAAAAT
AATAAAAAGGGTGACTTAAT

Downstream 100 bases:

>100_bases
AACTCCGTAACTTAGGTGCAATGAATCAGATTTTGCATGTAGATTTAAGCAACAATAAATCCTGGACTGAAGAAATTTCC
GAGGACATTAAAGAGTTGTT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAIRKLIASFDLCTGCEICTLVCSRRLAGGYNPRFARLRLESKMDALVSDPIVCNQCDNAFCEKVCPVSAIKRENGIPVV
VQDECIGCGQCQKYCPRDVIVMMDKKASKCDLCGGDPLCVKNCPTGALTYCDHGDCDHGESGEKRGEVK

Sequences:

>Translated_149_residues
MAIRKLIASFDLCTGCEICTLVCSRRLAGGYNPRFARLRLESKMDALVSDPIVCNQCDNAFCEKVCPVSAIKRENGIPVV
VQDECIGCGQCQKYCPRDVIVMMDKKASKCDLCGGDPLCVKNCPTGALTYCDHGDCDHGESGEKRGEVK
>Mature_148_residues
AIRKLIASFDLCTGCEICTLVCSRRLAGGYNPRFARLRLESKMDALVSDPIVCNQCDNAFCEKVCPVSAIKRENGIPVVV
QDECIGCGQCQKYCPRDVIVMMDKKASKCDLCGGDPLCVKNCPTGALTYCDHGDCDHGESGEKRGEVK

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI2367245, Length=137, Percent_Identity=35.036496350365, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87082180, Length=124, Percent_Identity=33.0645161290323, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1789067, Length=167, Percent_Identity=34.1317365269461, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1787872, Length=139, Percent_Identity=35.2517985611511, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1787122, Length=141, Percent_Identity=35.4609929078014, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87082179, Length=134, Percent_Identity=32.8358208955224, Blast_Score=61, Evalue=3e-11,
Organism=Escherichia coli, GI1790326, Length=159, Percent_Identity=32.0754716981132, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 16219; Mature: 16088

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
14.8 %Cys+Met (Translated Protein)
12.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
14.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRKLIASFDLCTGCEICTLVCSRRLAGGYNPRFARLRLESKMDALVSDPIVCNQCDNA
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCEEECCCCHH
FCEKVCPVSAIKRENGIPVVVQDECIGCGQCQKYCPRDVIVMMDKKASKCDLCGGDPLCV
HHHHHCCHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCEEE
KNCPTGALTYCDHGDCDHGESGEKRGEVK
CCCCCCCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIRKLIASFDLCTGCEICTLVCSRRLAGGYNPRFARLRLESKMDALVSDPIVCNQCDNA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCEEECCCCHH
FCEKVCPVSAIKRENGIPVVVQDECIGCGQCQKYCPRDVIVMMDKKASKCDLCGGDPLCV
HHHHHCCHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCEEE
KNCPTGALTYCDHGDCDHGESGEKRGEVK
CCCCCCCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]