| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yuaC [H]
Identifier: 188586667
GI number: 188586667
Start: 2174878
End: 2175429
Strand: Reverse
Name: yuaC [H]
Synonym: Nther_2057
Alternate gene names: 188586667
Gene position: 2175429-2174878 (Counterclockwise)
Preceding gene: 188586668
Following gene: 188586666
Centisome position: 68.72
GC content: 36.23
Gene sequence:
>552_bases ATGAGTGGAAAAGAGCAGCAAAATGGAAATGATTCCTTTGAGAAACTTCAAGAATTGAGATCGGAAATCAGTGTCGCTAT GGCTCAAACCATGGACCTATATGGAGTTCCCCCTTCTATTGGGAGATTATATGCCATACTTTATTTCAGTGATGAACCAA AGACTTTAGATGAACTGAGAGATATGATGGGTATGAGTAAAACCAGTATGAGCACTGGTGTCAGACGCTTAGAAAAAAAT AAGATGGTGAAAAAAGTATGGAAAAAAGGGGTTCGCAAGCATTTATACGAAGGAGAAACAGATTTTTTTAATACCTTTCT TAACTTCTTCATTCCTATGTGGAAGAGAGAAATTGAAGTAAACATGGAAGCCATTAAAAAAGTTGAGCCGGAACTAAAAG AAATGGCTGAAAGTAGTGATGGAGAAGTCAGTAAAGAGGCGGAAAAAGACTTGAAAAAGTTAGAAGAAGCAAAGCAATAT TATATATGGCTTAATAAATTGGCCAGAAGTATAGAATCGGGAGAGATATTCGACTTTATTCCCAAAGAATAG
Upstream 100 bases:
>100_bases GAGCTCCTAGTACACTTGATATTGATTGAAAATTATGTAACAATATAAGTCATACAGGACATACTGTATAGCAATAATCC TTAAAAGAAGGTGAATATAA
Downstream 100 bases:
>100_bases TATATTTCGGTAAAATTAAGAGCACAGAAGAGAAAATCGAAGAAGTAACTACGTCATAAAATCTCAAGGCCTTTTAATGC AATTGTCAAAAGGCCTTTTT
Product: YuaC
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSGKEQQNGNDSFEKLQELRSEISVAMAQTMDLYGVPPSIGRLYAILYFSDEPKTLDELRDMMGMSKTSMSTGVRRLEKN KMVKKVWKKGVRKHLYEGETDFFNTFLNFFIPMWKREIEVNMEAIKKVEPELKEMAESSDGEVSKEAEKDLKKLEEAKQY YIWLNKLARSIESGEIFDFIPKE
Sequences:
>Translated_183_residues MSGKEQQNGNDSFEKLQELRSEISVAMAQTMDLYGVPPSIGRLYAILYFSDEPKTLDELRDMMGMSKTSMSTGVRRLEKN KMVKKVWKKGVRKHLYEGETDFFNTFLNFFIPMWKREIEVNMEAIKKVEPELKEMAESSDGEVSKEAEKDLKKLEEAKQY YIWLNKLARSIESGEIFDFIPKE >Mature_182_residues SGKEQQNGNDSFEKLQELRSEISVAMAQTMDLYGVPPSIGRLYAILYFSDEPKTLDELRDMMGMSKTSMSTGVRRLEKNK MVKKVWKKGVRKHLYEGETDFFNTFLNFFIPMWKREIEVNMEAIKKVEPELKEMAESSDGEVSKEAEKDLKKLEEAKQYY IWLNKLARSIESGEIFDFIPKE
Specific function: Unknown
COG id: COG1510
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1563 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21373; Mature: 21242
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKEQQNGNDSFEKLQELRSEISVAMAQTMDLYGVPPSIGRLYAILYFSDEPKTLDELR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEEECCCCCHHHHHH DMMGMSKTSMSTGVRRLEKNKMVKKVWKKGVRKHLYEGETDFFNTFLNFFIPMWKREIEV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH NMEAIKKVEPELKEMAESSDGEVSKEAEKDLKKLEEAKQYYIWLNKLARSIESGEIFDFI HHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PKE CCC >Mature Secondary Structure SGKEQQNGNDSFEKLQELRSEISVAMAQTMDLYGVPPSIGRLYAILYFSDEPKTLDELR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEEECCCCCHHHHHH DMMGMSKTSMSTGVRRLEKNKMVKKVWKKGVRKHLYEGETDFFNTFLNFFIPMWKREIEV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH NMEAIKKVEPELKEMAESSDGEVSKEAEKDLKKLEEAKQYYIWLNKLARSIESGEIFDFI HHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PKE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8752328; 9384377 [H]