Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is tyrA [H]

Identifier: 188586661

GI number: 188586661

Start: 2167490

End: 2168395

Strand: Direct

Name: tyrA [H]

Synonym: Nther_2051

Alternate gene names: 188586661

Gene position: 2167490-2168395 (Clockwise)

Preceding gene: 188586660

Following gene: 188586662

Centisome position: 68.47

GC content: 35.43

Gene sequence:

>906_bases
ATGAACAAAAACAATTTGCTGGTCATAGGCTTGGGATTAATGGCTGGGAGCCTGGCTCTTTCACTAAAAGAATGTGATTG
TTTTAATAAAATCACTGGATATGACATCAATAAAGATTCAATGTCCGATGCTATTAATAATCACATAATAGACGATACCA
TTAATGAGCTTTCAGGGGAGACCTTAACAGAATTTGACTATATAATTCTGGGAACCCCTGTTTCTGAAACTTTAAAGCTT
TTACCCGACTTGGCAAGCAAAATAGATCACAATACTATTATTTTTGATCTAGGGAGTGTAAAAAAACCTGTAATCACTAA
AGCTCGAGAAGTAATTTCCAATCAGAATAACTCAAATATTGATTTTATCGGAGGTCACCCCATGGTCGGTAGTCATAAAC
AAGGAATCAAACATGTTATGACAAATCTATTCACTCAGAAGCCCTTTATTTTGACCCCTGTTGGGAATAAAAAGTTTGAG
GATGATACTAGTGTAAACATGATTTCTCAGCTACTTGTAAAAATAAATAGCCATCCTGTTGTCATGTCAGCAGAAAAACA
CGACCATATAGTAGCCGCTTTGAGCCATATACCTCACTTAATTGCCAGTGTAATGGTGAATACTATTTCCACTCGATCCG
AATTTGACATGACACTAGCAGGCGGTAGTTTTAAAGATATGACTAGAGTAGCCAAGGCCGATCCCCTTCTTTGGGAAGAT
ATTTTTCATCATAATAATGAAGAAATTGTAGAATGGTGGGAAGAAATTAAAGGACAAGTAGATCAAGTTTTAGCTTCTTA
TCAAAGGGATGACAGTACATCAGAACAGAATATTAAACGTATTGAAATAAAAGAATACTTATCAACAGCTTCAAACACTA
GACAAAAGCTAGAATCCAGATTTTGA

Upstream 100 bases:

>100_bases
CTCCAGCTAATCTCGAAAAACTAACCAATCAACTAACAGAATTAGCACCTCACTTTGATAAAAGTTTTACTATTGGTTCC
AAAACCGAGGAGCATATATA

Downstream 100 bases:

>100_bases
AAGGGAGATTTCAATGGAAATTTTAATTAACAATAGTAATGCTAAAAACCACTTTCAAGATACAAAATCTTCAGAAAGTA
AAGTTATGCAAGATAATGAA

Product: Prephenate dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGETLTEFDYIILGTPVSETLKL
LPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNIDFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFE
DDTSVNMISQLLVKINSHPVVMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED
IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESRF

Sequences:

>Translated_301_residues
MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGETLTEFDYIILGTPVSETLKL
LPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNIDFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFE
DDTSVNMISQLLVKINSHPVVMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED
IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESRF
>Mature_301_residues
MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGETLTEFDYIILGTPVSETLKL
LPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNIDFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFE
DDTSVNMISQLLVKINSHPVVMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED
IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESRF

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR002912
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF01842 ACT; PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 33703; Mature: 33703

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGE
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TLTEFDYIILGTPVSETLKLLPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNI
CCHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE
DFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFEDDTSVNMISQLLVKINSHPV
EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE
VMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCHHHHH
IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGE
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TLTEFDYIILGTPVSETLKLLPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNI
CCHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE
DFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFEDDTSVNMISQLLVKINSHPV
EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE
VMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCHHHHH
IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3106153; 9384377 [H]