| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is tyrA [H]
Identifier: 188586661
GI number: 188586661
Start: 2167490
End: 2168395
Strand: Direct
Name: tyrA [H]
Synonym: Nther_2051
Alternate gene names: 188586661
Gene position: 2167490-2168395 (Clockwise)
Preceding gene: 188586660
Following gene: 188586662
Centisome position: 68.47
GC content: 35.43
Gene sequence:
>906_bases ATGAACAAAAACAATTTGCTGGTCATAGGCTTGGGATTAATGGCTGGGAGCCTGGCTCTTTCACTAAAAGAATGTGATTG TTTTAATAAAATCACTGGATATGACATCAATAAAGATTCAATGTCCGATGCTATTAATAATCACATAATAGACGATACCA TTAATGAGCTTTCAGGGGAGACCTTAACAGAATTTGACTATATAATTCTGGGAACCCCTGTTTCTGAAACTTTAAAGCTT TTACCCGACTTGGCAAGCAAAATAGATCACAATACTATTATTTTTGATCTAGGGAGTGTAAAAAAACCTGTAATCACTAA AGCTCGAGAAGTAATTTCCAATCAGAATAACTCAAATATTGATTTTATCGGAGGTCACCCCATGGTCGGTAGTCATAAAC AAGGAATCAAACATGTTATGACAAATCTATTCACTCAGAAGCCCTTTATTTTGACCCCTGTTGGGAATAAAAAGTTTGAG GATGATACTAGTGTAAACATGATTTCTCAGCTACTTGTAAAAATAAATAGCCATCCTGTTGTCATGTCAGCAGAAAAACA CGACCATATAGTAGCCGCTTTGAGCCATATACCTCACTTAATTGCCAGTGTAATGGTGAATACTATTTCCACTCGATCCG AATTTGACATGACACTAGCAGGCGGTAGTTTTAAAGATATGACTAGAGTAGCCAAGGCCGATCCCCTTCTTTGGGAAGAT ATTTTTCATCATAATAATGAAGAAATTGTAGAATGGTGGGAAGAAATTAAAGGACAAGTAGATCAAGTTTTAGCTTCTTA TCAAAGGGATGACAGTACATCAGAACAGAATATTAAACGTATTGAAATAAAAGAATACTTATCAACAGCTTCAAACACTA GACAAAAGCTAGAATCCAGATTTTGA
Upstream 100 bases:
>100_bases CTCCAGCTAATCTCGAAAAACTAACCAATCAACTAACAGAATTAGCACCTCACTTTGATAAAAGTTTTACTATTGGTTCC AAAACCGAGGAGCATATATA
Downstream 100 bases:
>100_bases AAGGGAGATTTCAATGGAAATTTTAATTAACAATAGTAATGCTAAAAACCACTTTCAAGATACAAAATCTTCAGAAAGTA AAGTTATGCAAGATAATGAA
Product: Prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGETLTEFDYIILGTPVSETLKL LPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNIDFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFE DDTSVNMISQLLVKINSHPVVMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESRF
Sequences:
>Translated_301_residues MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGETLTEFDYIILGTPVSETLKL LPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNIDFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFE DDTSVNMISQLLVKINSHPVVMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESRF >Mature_301_residues MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGETLTEFDYIILGTPVSETLKL LPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNIDFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFE DDTSVNMISQLLVKINSHPVVMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESRF
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 33703; Mature: 33703
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC TLTEFDYIILGTPVSETLKLLPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNI CCHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE DFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFEDDTSVNMISQLLVKINSHPV EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE VMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCHHHHH IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESR HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC F C >Mature Secondary Structure MNKNNLLVIGLGLMAGSLALSLKECDCFNKITGYDINKDSMSDAINNHIIDDTINELSGE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC TLTEFDYIILGTPVSETLKLLPDLASKIDHNTIIFDLGSVKKPVITKAREVISNQNNSNI CCHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE DFIGGHPMVGSHKQGIKHVMTNLFTQKPFILTPVGNKKFEDDTSVNMISQLLVKINSHPV EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE VMSAEKHDHIVAALSHIPHLIASVMVNTISTRSEFDMTLAGGSFKDMTRVAKADPLLWED EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCHHHHH IFHHNNEEIVEWWEEIKGQVDQVLASYQRDDSTSEQNIKRIEIKEYLSTASNTRQKLESR HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]