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The map label for this gene is 188586640

Identifier: 188586640

GI number: 188586640

Start: 2142733

End: 2143164

Strand: Reverse

Name: 188586640

Synonym: Nther_2030

Alternate gene names: NA

Gene position: 2143164-2142733 (Counterclockwise)

Preceding gene: 188586641

Following gene: 188586639

Centisome position: 67.7

GC content: 36.81

Gene sequence:

>432_bases
ATGAAAGTAAAAGAATTTAAGCAGGGCAGGACCTTTATGGGTAGGCTCCCCAAGGGTGAAGATCTATTAACTTCTATTGA
AGCAATAGCCAAGGAGAAAGAGATAAAAGTTGCTAGAGTAGAATTGATAGGAGTAGTTGAAAATGCCGTTGTAGGCTTTT
TTCAGCACGATAAAAAACAATATAAACCTATTAAAATTGATGAGCACATGGAAATTGTCAACGCAGTAGGTAATATTTCC
CAAAAAGATGGGGAAATTAAAGCTCATATTCATATCACTCTAGGTGATCAAGATGGCAATACATACTCAGGACACCTAAT
GGAAGGTTCTAATATCTTTGCTGGTGAGATTGTAATGCAAGAGCTTGTTGGACCAGAATTGCATAGAAAGTACGATGAAA
GCACGGGAATATCTCTCTGGGATATAAATTAA

Upstream 100 bases:

>100_bases
TCAACTATCAACAACGGAGTAAAACAGAGCTAATATAAAAATTTACAAGTCAGATAAAAATAATATTAATTAAGTATAAG
TAAGGAGGGGTTTTATTATT

Downstream 100 bases:

>100_bases
CTCTTCTACGAGTAAGATTAAGATCGGCAAAAAATCCCATCTTCCTTTGTAAAGGAGGTAACTAGCTTGTTAGATCATCC
CAAGGTTTATGTCACTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKVKEFKQGRTFMGRLPKGEDLLTSIEAIAKEKEIKVARVELIGVVENAVVGFFQHDKKQYKPIKIDEHMEIVNAVGNIS
QKDGEIKAHIHITLGDQDGNTYSGHLMEGSNIFAGEIVMQELVGPELHRKYDESTGISLWDIN

Sequences:

>Translated_143_residues
MKVKEFKQGRTFMGRLPKGEDLLTSIEAIAKEKEIKVARVELIGVVENAVVGFFQHDKKQYKPIKIDEHMEIVNAVGNIS
QKDGEIKAHIHITLGDQDGNTYSGHLMEGSNIFAGEIVMQELVGPELHRKYDESTGISLWDIN
>Mature_143_residues
MKVKEFKQGRTFMGRLPKGEDLLTSIEAIAKEKEIKVARVELIGVVENAVVGFFQHDKKQYKPIKIDEHMEIVNAVGNIS
QKDGEIKAHIHITLGDQDGNTYSGHLMEGSNIFAGEIVMQELVGPELHRKYDESTGISLWDIN

Specific function: Unknown

COG id: COG1661

COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16061; Mature: 16061

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKEFKQGRTFMGRLPKGEDLLTSIEAIAKEKEIKVARVELIGVVENAVVGFFQHDKKQ
CCCCHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
YKPIKIDEHMEIVNAVGNISQKDGEIKAHIHITLGDQDGNTYSGHLMEGSNIFAGEIVMQ
CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEECEEEECCCEEHHHHHHH
ELVGPELHRKYDESTGISLWDIN
HHCCHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MKVKEFKQGRTFMGRLPKGEDLLTSIEAIAKEKEIKVARVELIGVVENAVVGFFQHDKKQ
CCCCHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
YKPIKIDEHMEIVNAVGNISQKDGEIKAHIHITLGDQDGNTYSGHLMEGSNIFAGEIVMQ
CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEECEEEECCCEEHHHHHHH
ELVGPELHRKYDESTGISLWDIN
HHCCHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA