| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is thiE [H]
Identifier: 188586532
GI number: 188586532
Start: 2013396
End: 2014034
Strand: Direct
Name: thiE [H]
Synonym: Nther_1918
Alternate gene names: 188586532
Gene position: 2013396-2014034 (Clockwise)
Preceding gene: 188586531
Following gene: 188586539
Centisome position: 63.6
GC content: 37.87
Gene sequence:
>639_bases ATGACTACTGGAAACAAAGGATTAAATACAGATATTTATGCTATTACGGCCGAACCCTTTTCCAGGGGAAGAGATAATAT TGCAGTGGTCAGTAAAATGCTCAAAGCCGGAATAAAAACCATTCAGTACAGGGAAAAAGATAAAACACCCAGAGAAAAGC TTACACAGTGCAAAAAGATCAGGGAAATGACCAGAGAAGCAAATTGTAAACTGATTATTAATGATGATATAGATATCGCA CTACTAGTTGGTGCAGACGGAGTTCACGTCGGTCAAGATGATCTACCAGTTAATCAGGTAAGGAAATTAGTGGGTGATGA TATGATTATTGGACTTTCAACCCATTCTCCCGATCAAGCCAAGGAAGCGATTTCATTAGGTGCCGACTATATTGGAGTAG GGCCTGTATTTGAGACAAATACAAAGGAAGATGTTCAAAAACCAGTAGGACTTGAATATGTTGATTACGTTTCGACTAAC CTGAATATCCCTTTTACTGCCATTGGTGGTATTAAACGCAACAATATTCATTTAGTTAAGGAAAAGGGAGCTTCATGCTT TGCCATTGTTACCGAGATAGTTGAAGCCCCAAATATTCCTGAAAGAATTCATGAGATTCGATCAATTATTCATTCATAA
Upstream 100 bases:
>100_bases GAACGTTCAGTAGTAGAGATCAAAGGTATGTTAATAAATAATGGTTATCAACCGGTATTAAAAGACTGGGAATTAATTTA GATTAGGGAGGGTTAATTTA
Downstream 100 bases:
>100_bases ACAAGAACAGCAAATAACATCCAGGTATTAGTCCAAATAGCGCCAATATCAAAGGCAGAGCAGCTGGCACTGTATTAACA AAATTATCACAGGACCAGCT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTTGNKGLNTDIYAITAEPFSRGRDNIAVVSKMLKAGIKTIQYREKDKTPREKLTQCKKIREMTREANCKLIINDDIDIA LLVGADGVHVGQDDLPVNQVRKLVGDDMIIGLSTHSPDQAKEAISLGADYIGVGPVFETNTKEDVQKPVGLEYVDYVSTN LNIPFTAIGGIKRNNIHLVKEKGASCFAIVTEIVEAPNIPERIHEIRSIIHS
Sequences:
>Translated_212_residues MTTGNKGLNTDIYAITAEPFSRGRDNIAVVSKMLKAGIKTIQYREKDKTPREKLTQCKKIREMTREANCKLIINDDIDIA LLVGADGVHVGQDDLPVNQVRKLVGDDMIIGLSTHSPDQAKEAISLGADYIGVGPVFETNTKEDVQKPVGLEYVDYVSTN LNIPFTAIGGIKRNNIHLVKEKGASCFAIVTEIVEAPNIPERIHEIRSIIHS >Mature_211_residues TTGNKGLNTDIYAITAEPFSRGRDNIAVVSKMLKAGIKTIQYREKDKTPREKLTQCKKIREMTREANCKLIINDDIDIAL LVGADGVHVGQDDLPVNQVRKLVGDDMIIGLSTHSPDQAKEAISLGADYIGVGPVFETNTKEDVQKPVGLEYVDYVSTNL NIPFTAIGGIKRNNIHLVKEKGASCFAIVTEIVEAPNIPERIHEIRSIIHS
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=185, Percent_Identity=31.3513513513514, Blast_Score=89, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6325042, Length=198, Percent_Identity=32.8282828282828, Blast_Score=101, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23322; Mature: 23191
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGNKGLNTDIYAITAEPFSRGRDNIAVVSKMLKAGIKTIQYREKDKTPREKLTQCKKI CCCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH REMTREANCKLIINDDIDIALLVGADGVHVGQDDLPVNQVRKLVGDDMIIGLSTHSPDQA HHHHHCCCCEEEEECCCCEEEEECCCCCEECCCCCCHHHHHHHHCCCEEEEECCCCCHHH KEAISLGADYIGVGPVFETNTKEDVQKPVGLEYVDYVSTNLNIPFTAIGGIKRNNIHLVK HHHHHHCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCEEEECCEECCCEEEEE EKGASCFAIVTEIVEAPNIPERIHEIRSIIHS CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTGNKGLNTDIYAITAEPFSRGRDNIAVVSKMLKAGIKTIQYREKDKTPREKLTQCKKI CCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH REMTREANCKLIINDDIDIALLVGADGVHVGQDDLPVNQVRKLVGDDMIIGLSTHSPDQA HHHHHCCCCEEEEECCCCEEEEECCCCCEECCCCCCHHHHHHHHCCCEEEEECCCCCHHH KEAISLGADYIGVGPVFETNTKEDVQKPVGLEYVDYVSTNLNIPFTAIGGIKRNNIHLVK HHHHHHCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCEEEECCEECCCEEEEE EKGASCFAIVTEIVEAPNIPERIHEIRSIIHS CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA