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The map label for this gene is mcpC [H]

Identifier: 188586501

GI number: 188586501

Start: 1977683

End: 1979659

Strand: Direct

Name: mcpC [H]

Synonym: Nther_1887

Alternate gene names: 188586501

Gene position: 1977683-1979659 (Clockwise)

Preceding gene: 188586500

Following gene: 188586526

Centisome position: 62.48

GC content: 32.27

Gene sequence:

>1977_bases
ATGCAGCATAGTTTAAAATTTAAATTTATTGTTTTTATTTTACTTTGTATAGCAATTCCTATATTTATAGTAGGTATATT
TTCTGTCATTGTAGGAGCAAGCACCATAGAAGAACAGGCAAAAGACGCATTATCAAAAGAAAGTGAGATAGTTGCAACAG
AAGTCCAAAATTATTTAGAACAAAACAAAAACATTGTAAAAACTGTTAATAATTATTATGAAAACAACTGGGAAAACGAG
ATAAATGAAATTCGAGAAAACTTTGGATTTTTCTTAGATAATAACGAACAATTTATTGATTTTTATGTGGGTGATGAAGA
AGGAAATATGATAATGGTTTCAGATGAAGAGTTAGGTGATGATTATGTACCAAGTGAACGACCTTGGTATCAAGGAGCCA
TTAATAATGAAGAATTGTTTGTAACAGAGCCTTATATTGATGTTGATACAGGTGAGCCAGTAATAACATTTTCTTCACAA
GTAATGGAAGCTGATAATGAGCAAGTTTTCGCAGCTGATCTTGGATTAGGTCATATTTCGGATTATGTCGGTGAAATGAA
TGTTGAGTATAATGGTACAACATACATTATTAGTTCAGAAGGTGAACTGATAGCACATTCTGAAAAAGATCTTGATAGTG
CTGCCGAAACAGTAAATAACAGAGGGTTTATTGACTCATTATTGGATGGACAAACTGGTTTTTTCCAAGAAGATAATATA
GCCGCTCATGGAATTATTTTAGATGATTTAGGCTGGGGAATTGTCATTGAAGCTGATTCAGAGCTGGTTTTTGCTGAGTC
AAATACTATTCGTCAGAACATGGTGTTAATTCCAATAATTATTTTAATATTGGTCAGTTTTATAGCCTATAAATATATTT
CCAAAAATATAACTACTCCAATTACAGAACTTAATAAAGTCTTTGAAAAAATGTCTAATTATGATCTATCTTTTGATGAG
AATGATAAAGCCTCAAAATACTTAACTAGAAAGGACGAAATAGGTCAAATTACAAATGGCCTGGCTAATATGCAATCTAA
TGTAGTAGAACTTATAAAAAGTATTCACGAAAAATCGGATGAATTAGCTGCATCATCTCAAGAATTGAGTTCAAACAGTG
AAGAAAATACACAAACAGTTAATGAAGTAGCTAAGGTCATTGAAGACATTTCAAATGGTGCCGCAAACCAAGCGGAAGAT
GTAGAGCTAGCTAATAATCAGATGGAAGAGTTTAATAATTTGATTGAACAAGATCAGCATTACTTAAAAGAAGTAACTGA
TAAAACAGAAACAGTTGATAAACTAAAGGAAGAAGGTTTCGAAACAATAGAGACTTTAGCAAATACAGCTAGTGAGAATA
GTAATTCCATTAAAGAAGTCCGGGCTATCATTAATGAGACTAGAGAGAGCACACAAAAAATTGAAAAAGCAAGTGATATG
ATTAAAGATATTGCAGAACAAACAAACTTACTCGCTCTAAATGCCAATATTGAAGCAGCACGAGCAGGCGAAGCAGGAAA
AGGATTTGCTGTAGTTGCTGACGAAATCCGAAAATTAGCTGAAGAGTCTAATGAATATTCCGAGGAAATATCTATGATTA
TATCAGAATTAACTACAAAAACCGAAAATGCTGTAAATGCTATGGAAACAGCAGAAAGACTCATGGATAATCAATCTGAA
AGTGTAAATGATACTAAAGATAAATTTACAGGTATAGCTGAAGCGATCCAGGCCTCTCAAGAACTGATTAATAAACTGAA
TAAAACAGGAGAACAGATGGAAGAAAAGAAAAAAGAATTTGTAGATAAACTTCAAAATTTATCATCAATAGCAGAAGAAA
ATTCTTCATCTACCCAACAAGCATCAGCCTCTGTTGAAGAACAAACTGCATCTATGGATGATATTGCAAAAGCAAGTGAG
AAACTAGCACAACTAGCTGAAGATATGCAAGAAGATGTTAATAGATTCAAATTTTAA

Upstream 100 bases:

>100_bases
GTATCCTTAACTTTTTAAACCTTTTACAAGGCTTTATCTTTTGAAGGATACCCTACTTTTTTGATGTAAAAAATTCTTCA
GTAAAGATGAGGTGAAACTA

Downstream 100 bases:

>100_bases
TTGTTTCAACGCTTGTACTACTAATTTTAAAGGTATAAACAACTACTTTCATATCGAGTAAAAAAACGGTGTAAACCTCT
CCTGCTCATGAATTACAGAA

Product: methyl-accepting chemotaxis sensory transducer with Cache sensor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MQHSLKFKFIVFILLCIAIPIFIVGIFSVIVGASTIEEQAKDALSKESEIVATEVQNYLEQNKNIVKTVNNYYENNWENE
INEIRENFGFFLDNNEQFIDFYVGDEEGNMIMVSDEELGDDYVPSERPWYQGAINNEELFVTEPYIDVDTGEPVITFSSQ
VMEADNEQVFAADLGLGHISDYVGEMNVEYNGTTYIISSEGELIAHSEKDLDSAAETVNNRGFIDSLLDGQTGFFQEDNI
AAHGIILDDLGWGIVIEADSELVFAESNTIRQNMVLIPIIILILVSFIAYKYISKNITTPITELNKVFEKMSNYDLSFDE
NDKASKYLTRKDEIGQITNGLANMQSNVVELIKSIHEKSDELAASSQELSSNSEENTQTVNEVAKVIEDISNGAANQAED
VELANNQMEEFNNLIEQDQHYLKEVTDKTETVDKLKEEGFETIETLANTASENSNSIKEVRAIINETRESTQKIEKASDM
IKDIAEQTNLLALNANIEAARAGEAGKGFAVVADEIRKLAEESNEYSEEISMIISELTTKTENAVNAMETAERLMDNQSE
SVNDTKDKFTGIAEAIQASQELINKLNKTGEQMEEKKKEFVDKLQNLSSIAEENSSSTQQASASVEEQTASMDDIAKASE
KLAQLAEDMQEDVNRFKF

Sequences:

>Translated_658_residues
MQHSLKFKFIVFILLCIAIPIFIVGIFSVIVGASTIEEQAKDALSKESEIVATEVQNYLEQNKNIVKTVNNYYENNWENE
INEIRENFGFFLDNNEQFIDFYVGDEEGNMIMVSDEELGDDYVPSERPWYQGAINNEELFVTEPYIDVDTGEPVITFSSQ
VMEADNEQVFAADLGLGHISDYVGEMNVEYNGTTYIISSEGELIAHSEKDLDSAAETVNNRGFIDSLLDGQTGFFQEDNI
AAHGIILDDLGWGIVIEADSELVFAESNTIRQNMVLIPIIILILVSFIAYKYISKNITTPITELNKVFEKMSNYDLSFDE
NDKASKYLTRKDEIGQITNGLANMQSNVVELIKSIHEKSDELAASSQELSSNSEENTQTVNEVAKVIEDISNGAANQAED
VELANNQMEEFNNLIEQDQHYLKEVTDKTETVDKLKEEGFETIETLANTASENSNSIKEVRAIINETRESTQKIEKASDM
IKDIAEQTNLLALNANIEAARAGEAGKGFAVVADEIRKLAEESNEYSEEISMIISELTTKTENAVNAMETAERLMDNQSE
SVNDTKDKFTGIAEAIQASQELINKLNKTGEQMEEKKKEFVDKLQNLSSIAEENSSSTQQASASVEEQTASMDDIAKASE
KLAQLAEDMQEDVNRFKF
>Mature_658_residues
MQHSLKFKFIVFILLCIAIPIFIVGIFSVIVGASTIEEQAKDALSKESEIVATEVQNYLEQNKNIVKTVNNYYENNWENE
INEIRENFGFFLDNNEQFIDFYVGDEEGNMIMVSDEELGDDYVPSERPWYQGAINNEELFVTEPYIDVDTGEPVITFSSQ
VMEADNEQVFAADLGLGHISDYVGEMNVEYNGTTYIISSEGELIAHSEKDLDSAAETVNNRGFIDSLLDGQTGFFQEDNI
AAHGIILDDLGWGIVIEADSELVFAESNTIRQNMVLIPIIILILVSFIAYKYISKNITTPITELNKVFEKMSNYDLSFDE
NDKASKYLTRKDEIGQITNGLANMQSNVVELIKSIHEKSDELAASSQELSSNSEENTQTVNEVAKVIEDISNGAANQAED
VELANNQMEEFNNLIEQDQHYLKEVTDKTETVDKLKEEGFETIETLANTASENSNSIKEVRAIINETRESTQKIEKASDM
IKDIAEQTNLLALNANIEAARAGEAGKGFAVVADEIRKLAEESNEYSEEISMIISELTTKTENAVNAMETAERLMDNQSE
SVNDTKDKFTGIAEAIQASQELINKLNKTGEQMEEKKKEFVDKLQNLSSIAEENSSSTQQASASVEEQTASMDDIAKASE
KLAQLAEDMQEDVNRFKF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=375, Percent_Identity=25.3333333333333, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1788195, Length=245, Percent_Identity=27.7551020408163, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI2367378, Length=302, Percent_Identity=24.8344370860927, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=357, Percent_Identity=24.6498599439776, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788194, Length=356, Percent_Identity=22.752808988764, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73590; Mature: 73590

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHSLKFKFIVFILLCIAIPIFIVGIFSVIVGASTIEEQAKDALSKESEIVATEVQNYLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNKNIVKTVNNYYENNWENEINEIRENFGFFLDNNEQFIDFYVGDEEGNMIMVSDEELGD
HCCHHHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCEEEEEEEECCCCCEEEEECHHCCC
DYVPSERPWYQGAINNEELFVTEPYIDVDTGEPVITFSSQVMEADNEQVFAADLGLGHIS
CCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCEEEECHHHHHCCCCEEEEECCCHHHHH
DYVGEMNVEYNGTTYIISSEGELIAHSEKDLDSAAETVNNRGFIDSLLDGQTGFFQEDNI
HHHHCCCEEECCEEEEEECCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC
AAHGIILDDLGWGIVIEADSELVFAESNTIRQNMVLIPIIILILVSFIAYKYISKNITTP
EECCEEEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ITELNKVFEKMSNYDLSFDENDKASKYLTRKDEIGQITNGLANMQSNVVELIKSIHEKSD
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAASSQELSSNSEENTQTVNEVAKVIEDISNGAANQAEDVELANNQMEEFNNLIEQDQH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YLKEVTDKTETVDKLKEEGFETIETLANTASENSNSIKEVRAIINETRESTQKIEKASDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IKDIAEQTNLLALNANIEAARAGEAGKGFAVVADEIRKLAEESNEYSEEISMIISELTTK
HHHHHHHCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TENAVNAMETAERLMDNQSESVNDTKDKFTGIAEAIQASQELINKLNKTGEQMEEKKKEF
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKLQNLSSIAEENSSSTQQASASVEEQTASMDDIAKASEKLAQLAEDMQEDVNRFKF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQHSLKFKFIVFILLCIAIPIFIVGIFSVIVGASTIEEQAKDALSKESEIVATEVQNYLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNKNIVKTVNNYYENNWENEINEIRENFGFFLDNNEQFIDFYVGDEEGNMIMVSDEELGD
HCCHHHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCEEEEEEEECCCCCEEEEECHHCCC
DYVPSERPWYQGAINNEELFVTEPYIDVDTGEPVITFSSQVMEADNEQVFAADLGLGHIS
CCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCEEEECHHHHHCCCCEEEEECCCHHHHH
DYVGEMNVEYNGTTYIISSEGELIAHSEKDLDSAAETVNNRGFIDSLLDGQTGFFQEDNI
HHHHCCCEEECCEEEEEECCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC
AAHGIILDDLGWGIVIEADSELVFAESNTIRQNMVLIPIIILILVSFIAYKYISKNITTP
EECCEEEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ITELNKVFEKMSNYDLSFDENDKASKYLTRKDEIGQITNGLANMQSNVVELIKSIHEKSD
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAASSQELSSNSEENTQTVNEVAKVIEDISNGAANQAEDVELANNQMEEFNNLIEQDQH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YLKEVTDKTETVDKLKEEGFETIETLANTASENSNSIKEVRAIINETRESTQKIEKASDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IKDIAEQTNLLALNANIEAARAGEAGKGFAVVADEIRKLAEESNEYSEEISMIISELTTK
HHHHHHHCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TENAVNAMETAERLMDNQSESVNDTKDKFTGIAEAIQASQELINKLNKTGEQMEEKKKEF
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKLQNLSSIAEENSSSTQQASASVEEQTASMDDIAKASEKLAQLAEDMQEDVNRFKF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]