| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is gtaB [H]
Identifier: 188586201
GI number: 188586201
Start: 1664361
End: 1665227
Strand: Direct
Name: gtaB [H]
Synonym: Nther_1583
Alternate gene names: 188586201
Gene position: 1664361-1665227 (Clockwise)
Preceding gene: 188586200
Following gene: 188586203
Centisome position: 52.58
GC content: 32.3
Gene sequence:
>867_bases TTGAACATTAAAAAAGCAATCATACCTGTCGCAGGCTTTGGTACTAGACTTTTACCTATTACCAAAGCCATCCCTAAAAC AATGTTACCTATCGTGGATAAACCAGTGATACATTACCTGGTTGAAGAAGCTGTGGCTTCAGGTATTGAAGAGATTATAA TTATTACAGGTCAGAAAAGAAAAAACATTGAAGATTATTTCAATAGATCTCAGGAGCTGGAAGAACATCTAATTAAAACG GGTAAAGAAGATTTGTTAGAACAGATCAAAAATATATCAAATCAGGCTAATATCAATTACGTAGCTCAGGATAGCGCTCT TGGTCTTGGGCATGCAATATATTGTGGTCGCAAATTTATAGATAAAGATGAATCATTTGCAGTTTTACTCGGTGATGATA TAGTTAGAGCAAAAAAGCCATGTATAGCACAATTGATAGATGTCTACAGGAAATATCGATCTAATATTATTGGCGTTCAG AGTGTTCCCGACGAAGAAGTAAGTAAATATGGTATTGTAAATGGGAAAAGAATAAATAATAAATTAGTCAAAGTAAGTGA CTTAGTCGAAAAGCCAGACAAGGAAAATACTCCTTCTAATTTAGCCATTCTAGGTAGATATATTATTCATAGTGATATTT TCGATGTATTAGAAGTTATCGGTCCTGGTGCAGGTGGAGAAATTCAGTTAACAGATGCTTTAAAAGCACTTAATTACAAT CAAAATATCTATTCTTACAGCTTTGAAGGAACTAGATACGATACAGGTGATAAATTAGGTTATTTAATCGCAAATATTGA ATTTGCCTTACAAAACAATGAATTAAAAAATAATTTAAAAAATAAAGTAAAGCCCCTTTTCTTTTAG
Upstream 100 bases:
>100_bases AGAAAAATCCTTGATTACGATCCTGAAATAACTCTTGAAGATGGGCTCAAAAAAACCTTAAATTGGTATAAAGACAGAGT ATGATTAGGAGTGAGTAATT
Downstream 100 bases:
>100_bases GGGCTTTACTTTATTTTGCTCATTCATATACAAATAATTTAACCCCGGGATGTAATCCCGGGGTGTTTGATGGCACTATG TTAATCGTTCACATTTAATT
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNIKKAIIPVAGFGTRLLPITKAIPKTMLPIVDKPVIHYLVEEAVASGIEEIIIITGQKRKNIEDYFNRSQELEEHLIKT GKEDLLEQIKNISNQANINYVAQDSALGLGHAIYCGRKFIDKDESFAVLLGDDIVRAKKPCIAQLIDVYRKYRSNIIGVQ SVPDEEVSKYGIVNGKRINNKLVKVSDLVEKPDKENTPSNLAILGRYIIHSDIFDVLEVIGPGAGGEIQLTDALKALNYN QNIYSYSFEGTRYDTGDKLGYLIANIEFALQNNELKNNLKNKVKPLFF
Sequences:
>Translated_288_residues MNIKKAIIPVAGFGTRLLPITKAIPKTMLPIVDKPVIHYLVEEAVASGIEEIIIITGQKRKNIEDYFNRSQELEEHLIKT GKEDLLEQIKNISNQANINYVAQDSALGLGHAIYCGRKFIDKDESFAVLLGDDIVRAKKPCIAQLIDVYRKYRSNIIGVQ SVPDEEVSKYGIVNGKRINNKLVKVSDLVEKPDKENTPSNLAILGRYIIHSDIFDVLEVIGPGAGGEIQLTDALKALNYN QNIYSYSFEGTRYDTGDKLGYLIANIEFALQNNELKNNLKNKVKPLFF >Mature_288_residues MNIKKAIIPVAGFGTRLLPITKAIPKTMLPIVDKPVIHYLVEEAVASGIEEIIIITGQKRKNIEDYFNRSQELEEHLIKT GKEDLLEQIKNISNQANINYVAQDSALGLGHAIYCGRKFIDKDESFAVLLGDDIVRAKKPCIAQLIDVYRKYRSNIIGVQ SVPDEEVSKYGIVNGKRINNKLVKVSDLVEKPDKENTPSNLAILGRYIIHSDIFDVLEVIGPGAGGEIQLTDALKALNYN QNIYSYSFEGTRYDTGDKLGYLIANIEFALQNNELKNNLKNKVKPLFF
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=288, Percent_Identity=42.0138888888889, Blast_Score=213, Evalue=8e-57, Organism=Escherichia coli, GI1788355, Length=278, Percent_Identity=38.8489208633094, Blast_Score=184, Evalue=5e-48, Organism=Escherichia coli, GI1788351, Length=264, Percent_Identity=30.6818181818182, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790224, Length=261, Percent_Identity=29.1187739463602, Blast_Score=82, Evalue=5e-17, Organism=Caenorhabditis elegans, GI133931050, Length=259, Percent_Identity=24.7104247104247, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32265; Mature: 32265
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKKAIIPVAGFGTRLLPITKAIPKTMLPIVDKPVIHYLVEEAVASGIEEIIIITGQKR CCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCC KNIEDYFNRSQELEEHLIKTGKEDLLEQIKNISNQANINYVAQDSALGLGHAIYCGRKFI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHC DKDESFAVLLGDDIVRAKKPCIAQLIDVYRKYRSNIIGVQSVPDEEVSKYGIVNGKRINN CCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHCCCCCCCCCC KLVKVSDLVEKPDKENTPSNLAILGRYIIHSDIFDVLEVIGPGAGGEIQLTDALKALNYN HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCC QNIYSYSFEGTRYDTGDKLGYLIANIEFALQNNELKNNLKNKVKPLFF CCEEEEECCCCEECCCCHHHHHEEEEEEEECCCHHHHHHHHHCCCCCC >Mature Secondary Structure MNIKKAIIPVAGFGTRLLPITKAIPKTMLPIVDKPVIHYLVEEAVASGIEEIIIITGQKR CCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCC KNIEDYFNRSQELEEHLIKTGKEDLLEQIKNISNQANINYVAQDSALGLGHAIYCGRKFI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHC DKDESFAVLLGDDIVRAKKPCIAQLIDVYRKYRSNIIGVQSVPDEEVSKYGIVNGKRINN CCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHCCCCCCCCCC KLVKVSDLVEKPDKENTPSNLAILGRYIIHSDIFDVLEVIGPGAGGEIQLTDALKALNYN HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCC QNIYSYSFEGTRYDTGDKLGYLIANIEFALQNNELKNNLKNKVKPLFF CCEEEEECCCCEECCCCHHHHHEEEEEEEECCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]